data_3BQD # _model_server_result.job_id FBgC9ZZh9UdD6xO0cFyVzQ _model_server_result.datetime_utc '2025-03-06 04:00:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bqd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 3BQD # _exptl.entry_id 3BQD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 488.618 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(1R,2R,3aS,3bS,10aR,10bS,11S,12aS)-1,11-dihydroxy-2,5,10a,12a-tetramethyl-7-phenyl-1,2,3,3a,3b,7,10,10a,10b,11,12,12a-dodecahydrocyclopenta[5,6]naphtho[1,2-f]indazol-1-yl]-2-hydroxyethanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BQD _cell.length_a 93.8 _cell.length_b 93.8 _cell.length_c 130 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BQD _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H36 N2 O4' _chem_comp.formula_weight 488.618 _chem_comp.id DAY _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(1R,2R,3aS,3bS,10aR,10bS,11S,12aS)-1,11-dihydroxy-2,5,10a,12a-tetramethyl-7-phenyl-1,2,3,3a,3b,7,10,10a,10b,11,12,12a-dodecahydrocyclopenta[5,6]naphtho[1,2-f]indazol-1-yl]-2-hydroxyethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "Deacylcortivazol;11beta,17,21-Trihydroxy-6,16alpha-dimethyl-2'-phenyl-2'H-pregna-2,4,6-trieno(3,2-c)pyrazol-20-one;2'H-Pregna-2,4,6-trieno(3,2-c)pyrazol-20-one;11,17,21-trihydroxy-6,16-dimethyl-2'-phenyl-(11beta,16alpha)-(9CI);6,16A-DIMETHYLPREGNA-4,6-DIENE-11B,17A,21-TRIOL-20-ONE-2'-PHENYL-(3,2-C)- PYRAZO" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C1 DAY sing 83 n n C2 C1 DAY sing 84 n n C1 H1 DAY sing 85 n n O1 C11 DAY sing 86 n n O1 HO1 DAY sing 87 n n C3 C2 DAY doub 88 n y C2 C22 DAY sing 89 n y C4 C3 DAY sing 90 n n N1 C3 DAY sing 91 n y C4 C5 DAY doub 92 n n C4 H4 DAY sing 93 n n C6 C5 DAY sing 94 n n C5 C10 DAY sing 95 n n C1 H1A DAY sing 96 n n C28 C6 DAY sing 97 n n C6 C7 DAY doub 98 n n C7 C8 DAY sing 99 n n C7 H7 DAY sing 100 n n C8 C14 DAY sing 101 n n C8 C9 DAY sing 102 n n C8 H8 DAY sing 103 n n C10 C9 DAY sing 104 n n C9 C11 DAY sing 105 n n C9 H9 DAY sing 106 n n C19 C10 DAY sing 107 n n C11 C12 DAY sing 108 n n C11 H11 DAY sing 109 n n C13 C12 DAY sing 110 n n C12 H12 DAY sing 111 n n C12 H12A DAY sing 112 n n C14 C13 DAY sing 113 n n C18 C13 DAY sing 114 n n C13 C17 DAY sing 115 n n C15 C14 DAY sing 116 n n C14 H14 DAY sing 117 n n C15 C16 DAY sing 118 n n C15 H15 DAY sing 119 n n C15 H15A DAY sing 120 n n C30 C16 DAY sing 121 n n C16 C17 DAY sing 122 n n C16 H16 DAY sing 123 n n C17 O2 DAY sing 124 n n C17 C20 DAY sing 125 n n C18 H18 DAY sing 126 n n C18 H18A DAY sing 127 n n C18 H18B DAY sing 128 n n C19 H19 DAY sing 129 n n C19 H19A DAY sing 130 n n C19 H19B DAY sing 131 n n O3 C20 DAY doub 132 n n C20 C21 DAY sing 133 n n C21 O4 DAY sing 134 n n C21 H21 DAY sing 135 n n C21 H21A DAY sing 136 n n C24 N1 DAY sing 137 n y N1 N2 DAY sing 138 n y O2 HO2 DAY sing 139 n n O4 HO4 DAY sing 140 n n N2 C22 DAY doub 141 n y C22 H22 DAY sing 142 n n C25 C23 DAY doub 143 n y C23 C24 DAY sing 144 n y C23 H23 DAY sing 145 n n C27 C24 DAY doub 146 n y C26 C25 DAY sing 147 n y C25 H25 DAY sing 148 n n C26 C29 DAY doub 149 n y C26 H26 DAY sing 150 n n C29 C27 DAY sing 151 n y C27 H27 DAY sing 152 n n C29 H29 DAY sing 153 n n C28 H28 DAY sing 154 n n C28 H28A DAY sing 155 n n C28 H28B DAY sing 156 n n C30 H30 DAY sing 157 n n C30 H30A DAY sing 158 n n C30 H30B DAY sing 159 n n # _atom_sites.entry_id 3BQD _atom_sites.fract_transf_matrix[1][1] 0.010661 _atom_sites.fract_transf_matrix[1][2] 0.006155 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007692 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DAY A 1 301 301 DAY DAY . D 4 HOH A 1 1 1 HOH HOH . D 4 HOH A 2 2 2 HOH HOH . D 4 HOH A 3 3 3 HOH HOH . D 4 HOH A 4 4 4 HOH HOH . D 4 HOH A 5 5 5 HOH HOH . D 4 HOH A 6 6 6 HOH HOH . D 4 HOH A 7 7 7 HOH HOH . D 4 HOH A 8 8 8 HOH HOH . D 4 HOH A 9 9 9 HOH HOH . D 4 HOH A 10 10 10 HOH HOH . D 4 HOH A 11 11 11 HOH HOH . D 4 HOH A 12 12 12 HOH HOH . D 4 HOH A 13 13 13 HOH HOH . D 4 HOH A 14 14 14 HOH HOH . D 4 HOH A 15 15 15 HOH HOH . D 4 HOH A 16 16 16 HOH HOH . D 4 HOH A 17 17 17 HOH HOH . D 4 HOH A 18 18 18 HOH HOH . D 4 HOH A 19 19 19 HOH HOH . D 4 HOH A 20 20 20 HOH HOH . D 4 HOH A 21 21 21 HOH HOH . D 4 HOH A 22 22 22 HOH HOH . D 4 HOH A 23 23 23 HOH HOH . D 4 HOH A 24 24 24 HOH HOH . D 4 HOH A 25 25 25 HOH HOH . D 4 HOH A 26 26 26 HOH HOH . D 4 HOH A 27 27 27 HOH HOH . D 4 HOH A 28 28 28 HOH HOH . D 4 HOH A 29 30 30 HOH HOH . D 4 HOH A 30 31 31 HOH HOH . D 4 HOH A 31 32 32 HOH HOH . D 4 HOH A 32 33 33 HOH HOH . D 4 HOH A 33 34 34 HOH HOH . D 4 HOH A 34 35 35 HOH HOH . D 4 HOH A 35 37 37 HOH HOH . D 4 HOH A 36 38 38 HOH HOH . D 4 HOH A 37 39 39 HOH HOH . D 4 HOH A 38 40 40 HOH HOH . D 4 HOH A 39 41 41 HOH HOH . D 4 HOH A 40 42 42 HOH HOH . D 4 HOH A 41 43 43 HOH HOH . D 4 HOH A 42 44 44 HOH HOH . D 4 HOH A 43 45 45 HOH HOH . D 4 HOH A 44 46 46 HOH HOH . D 4 HOH A 45 47 47 HOH HOH . D 4 HOH A 46 48 48 HOH HOH . D 4 HOH A 47 49 49 HOH HOH . D 4 HOH A 48 50 50 HOH HOH . D 4 HOH A 49 51 51 HOH HOH . D 4 HOH A 50 52 52 HOH HOH . D 4 HOH A 51 53 53 HOH HOH . D 4 HOH A 52 54 54 HOH HOH . D 4 HOH A 53 55 55 HOH HOH . D 4 HOH A 54 56 56 HOH HOH . D 4 HOH A 55 57 57 HOH HOH . D 4 HOH A 56 58 58 HOH HOH . D 4 HOH A 57 59 59 HOH HOH . D 4 HOH A 58 60 60 HOH HOH . D 4 HOH A 59 61 61 HOH HOH . D 4 HOH A 60 62 62 HOH HOH . D 4 HOH A 61 63 63 HOH HOH . E 4 HOH B 1 29 29 HOH HOH . E 4 HOH B 2 36 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DAY . . . C 3 38.142 31.611 9.944 1 52.19 ? C1 DAY 301 A 1 HETATM 2 O O1 DAY . . . C 3 38.353 28.423 11.296 1 53.73 ? O1 DAY 301 A 1 HETATM 3 C C2 DAY . . . C 3 37.845 32.848 9.515 1 51.24 ? C2 DAY 301 A 1 HETATM 4 C C3 DAY . . . C 3 38.224 33.26 8.126 1 50.55 ? C3 DAY 301 A 1 HETATM 5 C C4 DAY . . . C 3 39.003 32.215 7.277 1 50.51 ? C4 DAY 301 A 1 HETATM 6 C C5 DAY . . . C 3 39.306 30.966 7.773 1 52.37 ? C5 DAY 301 A 1 HETATM 7 C C6 DAY . . . C 3 40.468 30.23 6.985 1 51.68 ? C6 DAY 301 A 1 HETATM 8 C C7 DAY . . . C 3 41.115 29.038 7.649 1 50.58 ? C7 DAY 301 A 1 HETATM 9 C C8 DAY . . . C 3 40.608 28.524 9.042 1 51.4 ? C8 DAY 301 A 1 HETATM 10 C C9 DAY . . . C 3 40.017 29.734 9.941 1 52.63 ? C9 DAY 301 A 1 HETATM 11 C C10 DAY . . . C 3 38.85 30.495 9.182 1 52.82 ? C10 DAY 301 A 1 HETATM 12 C C11 DAY . . . C 3 39.507 29.259 11.373 1 52.82 ? C11 DAY 301 A 1 HETATM 13 C C12 DAY . . . C 3 40.551 28.478 12.148 1 53.98 ? C12 DAY 301 A 1 HETATM 14 C C13 DAY . . . C 3 41.188 27.284 11.308 1 53.44 ? C13 DAY 301 A 1 HETATM 15 C C14 DAY . . . C 3 41.72 27.856 9.903 1 52.16 ? C14 DAY 301 A 1 HETATM 16 C C15 DAY . . . C 3 42.532 26.61 9.335 1 50.8 ? C15 DAY 301 A 1 HETATM 17 C C16 DAY . . . C 3 43.042 25.902 10.571 1 54.25 ? C16 DAY 301 A 1 HETATM 18 C C17 DAY . . . C 3 42.501 26.713 11.833 1 52.59 ? C17 DAY 301 A 1 HETATM 19 C C18 DAY . . . C 3 40.096 26.12 10.989 1 54.12 ? C18 DAY 301 A 1 HETATM 20 C C19 DAY . . . C 3 37.576 29.632 8.772 1 52.54 ? C19 DAY 301 A 1 HETATM 21 C C20 DAY . . . C 3 42.252 25.752 13.078 1 54.85 ? C20 DAY 301 A 1 HETATM 22 C C21 DAY . . . C 3 41.731 26.244 14.456 1 55.71 ? C21 DAY 301 A 1 HETATM 23 N N1 DAY . . . C 3 37.574 34.512 7.74 1 50.02 ? N1 DAY 301 A 1 HETATM 24 O O2 DAY . . . C 3 43.471 27.771 12.17 1 55.18 ? O2 DAY 301 A 1 HETATM 25 O O3 DAY . . . C 3 42.475 24.552 12.98 1 59 ? O3 DAY 301 A 1 HETATM 26 O O4 DAY . . . C 3 41.272 25.196 15.295 1 59.24 ? O4 DAY 301 A 1 HETATM 27 C C22 DAY . . . C 3 37.113 34.097 10.216 1 53.08 ? C22 DAY 301 A 1 HETATM 28 N N2 DAY . . . C 3 37.22 34.976 8.915 1 49.85 ? N2 DAY 301 A 1 HETATM 29 C C23 DAY . . . C 3 37.709 34.583 5.475 1 50.92 ? C23 DAY 301 A 1 HETATM 30 C C24 DAY . . . C 3 37.595 35.241 6.712 1 50.36 ? C24 DAY 301 A 1 HETATM 31 C C25 DAY . . . C 3 37.692 35.185 4.252 1 51.6 ? C25 DAY 301 A 1 HETATM 32 C C26 DAY . . . C 3 37.565 36.633 3.93 1 50.89 ? C26 DAY 301 A 1 HETATM 33 C C27 DAY . . . C 3 37.431 36.672 6.525 1 52.16 ? C27 DAY 301 A 1 HETATM 34 C C29 DAY . . . C 3 37.423 37.417 5.148 1 48.98 ? C29 DAY 301 A 1 HETATM 35 C C28 DAY . . . C 3 40.933 30.663 5.705 1 49.29 ? C28 DAY 301 A 1 HETATM 36 C C30 DAY . . . C 3 44.562 25.916 10.489 1 55.13 ? C30 DAY 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #