data_3BR6
#
_model_server_result.job_id            lSsx8CnJCPMV72vp-jDYwA 
_model_server_result.datetime_utc      '2024-10-15 08:22:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3br6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":201}' 
#
_entry.id    3BR6 
#
_exptl.entry_id    3BR6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.557 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'RHODAMINE 6G' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BR6 
_cell.length_a            173.099 
_cell.length_b            173.099 
_cell.length_c            95.576 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BR6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
PISA hexadecameric 16 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,L,M,N,O,P,Q,R,Y,AA 1 1 
B,D,E,F,G,H,I,J,K,S,T,U,V,W,X,Z 2 1 
A,C,L,M,N,O,P,Q,R,Y,AA 3 2,3,4,5 
B,D,E,F,G,H,I,J,K,S,T,U,V,W,X,Z 3 1,6,7,8 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_545 x+1/2,-y-1/2,-z+1/2 1 0 0 0 -1 0 0 0 -1 86.5495 -86.5495 47.788 
3 'crystal symmetry operation' 4_545 y+1/2,-x-1/2,z+1/2 0 1 0 -1 0 0 0 0 1 86.5495 -86.5495 47.788 
4 'crystal symmetry operation' 5_455 -x-1/2,y+1/2,-z+1/2 -1 0 0 0 1 0 0 0 -1 -86.5495 86.5495 47.788 
5 'crystal symmetry operation' 3_455 -y-1/2,x+1/2,z+1/2 0 -1 0 1 0 0 0 0 1 -86.5495 86.5495 47.788 
6 'crystal symmetry operation' 8_556 -y,-x,-z+1 0 -1 0 -1 0 0 0 0 -1 0 0 95.576 
7 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
8 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 95.576 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             R 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C28 H31 N2 O3 1' 
_chem_comp.formula_weight    443.557 
_chem_comp.id                RHQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'RHODAMINE 6G' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 RHQ sing 277 n y 
C1 C6 RHQ doub 278 n y 
C1 O1 RHQ sing 279 n y 
C2 C3 RHQ sing 280 n y 
C2 C9 RHQ doub 281 n y 
C3 C4 RHQ doub 282 n y 
C3 H31 RHQ sing 283 n n 
C4 C5 RHQ sing 284 n y 
C4 C21 RHQ sing 285 n n 
C5 C6 RHQ sing 286 n y 
C5 N2 RHQ doub 287 z n 
C6 H61 RHQ sing 288 n n 
O1 C7 RHQ sing 289 n y 
C7 C8 RHQ doub 290 n y 
C7 C10 RHQ sing 291 n y 
C8 C9 RHQ sing 292 n y 
C8 C13 RHQ sing 293 n y 
C9 C14 RHQ sing 294 n y 
C10 C11 RHQ doub 295 n y 
C10 H101 RHQ sing 296 n n 
C11 C12 RHQ sing 297 n y 
C11 N1 RHQ sing 298 n n 
C12 C13 RHQ doub 299 n y 
C12 C20 RHQ sing 300 n n 
C13 H131 RHQ sing 301 n n 
N1 C22 RHQ sing 302 n n 
N1 HN11 RHQ sing 303 n n 
C14 C15 RHQ doub 304 n y 
C14 C19 RHQ sing 305 n y 
C15 C16 RHQ sing 306 n y 
C15 H151 RHQ sing 307 n n 
C16 C17 RHQ doub 308 n y 
C16 H161 RHQ sing 309 n n 
C17 C18 RHQ sing 310 n y 
C17 H171 RHQ sing 311 n n 
C18 C19 RHQ doub 312 n y 
C18 H181 RHQ sing 313 n n 
C19 C26 RHQ sing 314 n n 
C20 H201 RHQ sing 315 n n 
C20 H202 RHQ sing 316 n n 
C20 H203 RHQ sing 317 n n 
C21 H211 RHQ sing 318 n n 
C21 H212 RHQ sing 319 n n 
C21 H213 RHQ sing 320 n n 
C22 C23 RHQ sing 321 n n 
C22 H221 RHQ sing 322 n n 
C22 H222 RHQ sing 323 n n 
C23 H231 RHQ sing 324 n n 
C23 H232 RHQ sing 325 n n 
C23 H233 RHQ sing 326 n n 
N2 C24 RHQ sing 327 n n 
N2 HN21 RHQ sing 328 n n 
C24 C25 RHQ sing 329 n n 
C24 H241 RHQ sing 330 n n 
C24 H242 RHQ sing 331 n n 
C25 H251 RHQ sing 332 n n 
C25 H252 RHQ sing 333 n n 
C25 H253 RHQ sing 334 n n 
C26 O27 RHQ doub 335 n n 
C26 O2 RHQ sing 336 n n 
O2 C28 RHQ sing 337 n n 
C28 C29 RHQ sing 338 n n 
C28 H281 RHQ sing 339 n n 
C28 H282 RHQ sing 340 n n 
C29 H291 RHQ sing 341 n n 
C29 H292 RHQ sing 342 n n 
C29 H293 RHQ sing 343 n n 
#
_atom_sites.entry_id                     3BR6 
_atom_sites.fract_transf_matrix[1][1]    0.005777 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005777 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010463 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 D 1 507 507 SO4 SO4 . 
F 2 SO4 D 1 508 508 SO4 SO4 . 
G 2 SO4 D 1 509 509 SO4 SO4 . 
H 2 SO4 D 1 510 510 SO4 SO4 . 
I 2 SO4 D 1 511 511 SO4 SO4 . 
J 2 SO4 D 1 512 1 SO4 SO4 . 
K 2 SO4 D 1 513 4 SO4 SO4 . 
L 2 SO4 A 1 501 501 SO4 SO4 . 
M 2 SO4 A 1 502 502 SO4 SO4 . 
N 2 SO4 A 1 503 503 SO4 SO4 . 
O 2 SO4 A 1 504 504 SO4 SO4 . 
P 2 SO4 A 1 512 512 SO4 SO4 . 
Q 2 SO4 A 1 513 2 SO4 SO4 . 
R 3 RHQ A 1 201 201 RHQ RHQ . 
S 2 SO4 E 1 500 500 SO4 SO4 . 
T 2 SO4 E 1 505 505 SO4 SO4 . 
U 2 SO4 E 1 506 506 SO4 SO4 . 
V 2 SO4 E 1 513 513 SO4 SO4 . 
W 2 SO4 E 1 514 514 SO4 SO4 . 
X 2 SO4 E 1 515 3 SO4 SO4 . 
Y 4 HOH B 1 195 11 HOH HOH . 
Z 4 HOH D 1 514 1 HOH HOH . 
AA 4 HOH A 1 514 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RHQ . . . R 3 -63.997 -47.007 2.016 1 99.45 ? C1 RHQ 201 A 1 
HETATM 2 C C2 RHQ . . . R 3 -63.73 -46.662 3.342 1 99.44 ? C2 RHQ 201 A 1 
HETATM 3 C C3 RHQ . . . R 3 -62.483 -46.099 3.666 1 99.31 ? C3 RHQ 201 A 1 
HETATM 4 C C4 RHQ . . . R 3 -61.514 -45.883 2.675 1 99.37 ? C4 RHQ 201 A 1 
HETATM 5 C C5 RHQ . . . R 3 -61.798 -46.234 1.347 1 99.5 ? C5 RHQ 201 A 1 
HETATM 6 C C6 RHQ . . . R 3 -63.035 -46.792 1.042 1 99.41 ? C6 RHQ 201 A 1 
HETATM 7 O O1 RHQ . . . R 3 -65.094 -47.513 1.662 1 99.45 ? O1 RHQ 201 A 1 
HETATM 8 C C7 RHQ . . . R 3 -66.046 -47.761 2.442 1 99.48 ? C7 RHQ 201 A 1 
HETATM 9 C C8 RHQ . . . R 3 -65.939 -47.478 3.807 1 99.48 ? C8 RHQ 201 A 1 
HETATM 10 C C9 RHQ . . . R 3 -64.742 -46.907 4.279 1 99.33 ? C9 RHQ 201 A 1 
HETATM 11 C C10 RHQ . . . R 3 -67.213 -48.331 1.922 1 99.38 ? C10 RHQ 201 A 1 
HETATM 12 C C11 RHQ . . . R 3 -68.304 -48.63 2.741 1 99.4 ? C11 RHQ 201 A 1 
HETATM 13 C C12 RHQ . . . R 3 -68.203 -48.345 4.111 1 99.44 ? C12 RHQ 201 A 1 
HETATM 14 C C13 RHQ . . . R 3 -67.032 -47.776 4.634 1 99.48 ? C13 RHQ 201 A 1 
HETATM 15 N N1 RHQ . . . R 3 -69.386 -49.185 2.109 1 99.41 ? N1 RHQ 201 A 1 
HETATM 16 C C14 RHQ . . . R 3 -64.554 -46.565 5.718 1 99.33 ? C14 RHQ 201 A 1 
HETATM 17 C C15 RHQ . . . R 3 -63.906 -47.477 6.543 1 98.9 ? C15 RHQ 201 A 1 
HETATM 18 C C16 RHQ . . . R 3 -63.712 -47.192 7.89 1 98.98 ? C16 RHQ 201 A 1 
HETATM 19 C C17 RHQ . . . R 3 -64.166 -45.991 8.42 1 98.74 ? C17 RHQ 201 A 1 
HETATM 20 C C18 RHQ . . . R 3 -64.812 -45.079 7.601 1 98.99 ? C18 RHQ 201 A 1 
HETATM 21 C C19 RHQ . . . R 3 -65.014 -45.354 6.244 1 99.59 ? C19 RHQ 201 A 1 
HETATM 22 C C20 RHQ . . . R 3 -69.318 -48.619 5.084 1 99.48 ? C20 RHQ 201 A 1 
HETATM 23 C C21 RHQ . . . R 3 -60.196 -45.275 3.084 1 99.32 ? C21 RHQ 201 A 1 
HETATM 24 C C22 RHQ . . . R 3 -70.67 -49.601 2.683 1 99.53 ? C22 RHQ 201 A 1 
HETATM 25 C C23 RHQ . . . R 3 -70.559 -50.891 3.477 1 99.39 ? C23 RHQ 201 A 1 
HETATM 26 N N2 RHQ . . . R 3 -60.976 -46.094 0.266 1 99.44 ? N2 RHQ 201 A 1 
HETATM 27 C C24 RHQ . . . R 3 -59.634 -45.556 0.23 1 99.31 ? C24 RHQ 201 A 1 
HETATM 28 C C25 RHQ . . . R 3 -59.212 -45.435 -1.217 1 98.63 ? C25 RHQ 201 A 1 
HETATM 29 C C26 RHQ . . . R 3 -65.724 -44.307 5.415 1 99.78 ? C26 RHQ 201 A 1 
HETATM 30 O O27 RHQ . . . R 3 -66.081 -44.455 4.252 1 99.23 ? O27 RHQ 201 A 1 
HETATM 31 O O2 RHQ . . . R 3 -65.971 -43.02 6.031 1 101.55 ? O2 RHQ 201 A 1 
HETATM 32 C C28 RHQ . . . R 3 -64.852 -42.147 6.068 1 103.42 ? C28 RHQ 201 A 1 
HETATM 33 C C29 RHQ . . . R 3 -65.262 -40.736 6.423 1 104.41 ? C29 RHQ 201 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           376 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           33 
#