data_3BRG
#
_model_server_result.job_id            FQU1N-dicV7BSW3ubhyW0Q 
_model_server_result.datetime_utc      '2024-11-04 22:40:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3brg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":5}' 
#
_entry.id    3BRG 
#
_exptl.entry_id    3BRG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BRG 
_cell.length_a            66.769 
_cell.length_b            95.388 
_cell.length_c            113.695 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BRG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
hydrog WATSON-CRICK hydrog1 A N3 DT 3 A DT 3 1_555 B N1 DA 15 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A O4 DT 3 A DT 3 1_555 B N6 DA 15 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A N3 DC 4 A DC 4 1_555 B N1 DG 14 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N4 DC 4 A DC 4 1_555 B O6 DG 14 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A O2 DC 4 A DC 4 1_555 B N2 DG 14 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A N3 DT 5 A DT 5 1_555 B N1 DA 13 B DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A O4 DT 5 A DT 5 1_555 B N6 DA 13 B DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N3 DT 6 A DT 6 1_555 B N1 DA 12 B DA 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A O4 DT 6 A DT 6 1_555 B N6 DA 12 B DA 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N3 DT 7 A DT 7 1_555 B N1 DA 11 B DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A O4 DT 7 A DT 7 1_555 B N6 DA 11 B DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A N3 DC 8 A DC 8 1_555 B N1 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N4 DC 8 A DC 8 1_555 B O6 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A O2 DC 8 A DC 8 1_555 B N2 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A N3 DC 9 A DC 9 1_555 B N1 DG 9 B DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N4 DC 9 A DC 9 1_555 B O6 DG 9 B DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A O2 DC 9 A DC 9 1_555 B N2 DG 9 B DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A N3 DC 10 A DC 10 1_555 B N1 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 A N4 DC 10 A DC 10 1_555 B O6 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog20 A O2 DC 10 A DC 10 1_555 B N2 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 A N1 DA 11 A DA 11 1_555 B N3 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 A N6 DA 11 A DA 11 1_555 B O4 DT 7 B DT 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 A N3 DC 12 A DC 12 1_555 B N1 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog24 A N4 DC 12 A DC 12 1_555 B O6 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog25 A O2 DC 12 A DC 12 1_555 B N2 DG 6 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog26 A N1 DA 13 A DA 13 1_555 B N3 DT 5 B DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog27 A N6 DA 13 A DA 13 1_555 B O4 DT 5 B DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog28 A N1 DG 14 A DG 14 1_555 B N3 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog29 A N2 DG 14 A DG 14 1_555 B O2 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog30 A O6 DG 14 A DG 14 1_555 B N4 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog31 A N3 DT 15 A DT 15 1_555 B N1 DA 3 B DA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog32 A O4 DT 15 A DT 15 1_555 B N6 DA 3 B DA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 232 n n 
C1 C2 EDO sing 233 n n 
C1 H11 EDO sing 234 n n 
C1 H12 EDO sing 235 n n 
O1 HO1 EDO sing 236 n n 
C2 O2 EDO sing 237 n n 
C2 H21 EDO sing 238 n n 
C2 H22 EDO sing 239 n n 
O2 HO2 EDO sing 240 n n 
#
_atom_sites.entry_id                     3BRG 
_atom_sites.fract_transf_matrix[1][1]    0.014977 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010483 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008795 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 EDO C 1 1 1 EDO EDO . 
E 4 EDO C 1 2 2 EDO EDO . 
F 4 EDO C 1 3 3 EDO EDO . 
G 4 EDO C 1 4 4 EDO EDO . 
H 4 EDO C 1 5 5 EDO EDO . 
I 4 EDO C 1 6 6 EDO EDO . 
J 4 EDO C 1 7 7 EDO EDO . 
K 4 EDO C 1 8 8 EDO EDO . 
L 4 EDO C 1 9 9 EDO EDO . 
M 4 EDO C 1 10 10 EDO EDO . 
N 4 EDO C 1 11 11 EDO EDO . 
O 4 EDO C 1 12 12 EDO EDO . 
P 5 HOH A 1 47 47 HOH HOH . 
P 5 HOH A 2 72 72 HOH HOH . 
P 5 HOH A 3 80 80 HOH HOH . 
P 5 HOH A 4 82 82 HOH HOH . 
Q 5 HOH B 1 45 45 HOH HOH . 
Q 5 HOH B 2 116 116 HOH HOH . 
R 5 HOH C 1 475 1 HOH HOH . 
R 5 HOH C 2 476 2 HOH HOH . 
R 5 HOH C 3 477 3 HOH HOH . 
R 5 HOH C 4 478 4 HOH HOH . 
R 5 HOH C 5 479 5 HOH HOH . 
R 5 HOH C 6 480 6 HOH HOH . 
R 5 HOH C 7 481 7 HOH HOH . 
R 5 HOH C 8 482 8 HOH HOH . 
R 5 HOH C 9 483 9 HOH HOH . 
R 5 HOH C 10 484 10 HOH HOH . 
R 5 HOH C 11 485 11 HOH HOH . 
R 5 HOH C 12 486 12 HOH HOH . 
R 5 HOH C 13 487 13 HOH HOH . 
R 5 HOH C 14 488 14 HOH HOH . 
R 5 HOH C 15 489 15 HOH HOH . 
R 5 HOH C 16 490 16 HOH HOH . 
R 5 HOH C 17 491 17 HOH HOH . 
R 5 HOH C 18 492 18 HOH HOH . 
R 5 HOH C 19 493 19 HOH HOH . 
R 5 HOH C 20 494 20 HOH HOH . 
R 5 HOH C 21 495 21 HOH HOH . 
R 5 HOH C 22 496 22 HOH HOH . 
R 5 HOH C 23 497 23 HOH HOH . 
R 5 HOH C 24 498 24 HOH HOH . 
R 5 HOH C 25 499 25 HOH HOH . 
R 5 HOH C 26 500 26 HOH HOH . 
R 5 HOH C 27 501 27 HOH HOH . 
R 5 HOH C 28 502 28 HOH HOH . 
R 5 HOH C 29 503 29 HOH HOH . 
R 5 HOH C 30 504 30 HOH HOH . 
R 5 HOH C 31 505 31 HOH HOH . 
R 5 HOH C 32 506 32 HOH HOH . 
R 5 HOH C 33 507 33 HOH HOH . 
R 5 HOH C 34 508 34 HOH HOH . 
R 5 HOH C 35 509 35 HOH HOH . 
R 5 HOH C 36 510 36 HOH HOH . 
R 5 HOH C 37 511 37 HOH HOH . 
R 5 HOH C 38 512 38 HOH HOH . 
R 5 HOH C 39 513 39 HOH HOH . 
R 5 HOH C 40 514 40 HOH HOH . 
R 5 HOH C 41 515 41 HOH HOH . 
R 5 HOH C 42 516 42 HOH HOH . 
R 5 HOH C 43 517 43 HOH HOH . 
R 5 HOH C 44 518 44 HOH HOH . 
R 5 HOH C 45 519 46 HOH HOH . 
R 5 HOH C 46 520 48 HOH HOH . 
R 5 HOH C 47 521 49 HOH HOH . 
R 5 HOH C 48 522 50 HOH HOH . 
R 5 HOH C 49 523 51 HOH HOH . 
R 5 HOH C 50 524 52 HOH HOH . 
R 5 HOH C 51 525 53 HOH HOH . 
R 5 HOH C 52 526 54 HOH HOH . 
R 5 HOH C 53 527 55 HOH HOH . 
R 5 HOH C 54 528 56 HOH HOH . 
R 5 HOH C 55 529 57 HOH HOH . 
R 5 HOH C 56 530 58 HOH HOH . 
R 5 HOH C 57 531 59 HOH HOH . 
R 5 HOH C 58 532 60 HOH HOH . 
R 5 HOH C 59 533 61 HOH HOH . 
R 5 HOH C 60 534 62 HOH HOH . 
R 5 HOH C 61 535 63 HOH HOH . 
R 5 HOH C 62 536 64 HOH HOH . 
R 5 HOH C 63 537 65 HOH HOH . 
R 5 HOH C 64 538 66 HOH HOH . 
R 5 HOH C 65 539 67 HOH HOH . 
R 5 HOH C 66 540 68 HOH HOH . 
R 5 HOH C 67 541 69 HOH HOH . 
R 5 HOH C 68 542 70 HOH HOH . 
R 5 HOH C 69 543 71 HOH HOH . 
R 5 HOH C 70 544 73 HOH HOH . 
R 5 HOH C 71 545 74 HOH HOH . 
R 5 HOH C 72 546 75 HOH HOH . 
R 5 HOH C 73 547 76 HOH HOH . 
R 5 HOH C 74 548 77 HOH HOH . 
R 5 HOH C 75 549 78 HOH HOH . 
R 5 HOH C 76 550 79 HOH HOH . 
R 5 HOH C 77 551 81 HOH HOH . 
R 5 HOH C 78 552 83 HOH HOH . 
R 5 HOH C 79 553 84 HOH HOH . 
R 5 HOH C 80 554 85 HOH HOH . 
R 5 HOH C 81 555 86 HOH HOH . 
R 5 HOH C 82 556 87 HOH HOH . 
R 5 HOH C 83 557 88 HOH HOH . 
R 5 HOH C 84 558 89 HOH HOH . 
R 5 HOH C 85 559 90 HOH HOH . 
R 5 HOH C 86 560 91 HOH HOH . 
R 5 HOH C 87 561 92 HOH HOH . 
R 5 HOH C 88 562 93 HOH HOH . 
R 5 HOH C 89 563 94 HOH HOH . 
R 5 HOH C 90 564 95 HOH HOH . 
R 5 HOH C 91 565 96 HOH HOH . 
R 5 HOH C 92 566 97 HOH HOH . 
R 5 HOH C 93 567 98 HOH HOH . 
R 5 HOH C 94 568 99 HOH HOH . 
R 5 HOH C 95 569 100 HOH HOH . 
R 5 HOH C 96 570 101 HOH HOH . 
R 5 HOH C 97 571 102 HOH HOH . 
R 5 HOH C 98 572 103 HOH HOH . 
R 5 HOH C 99 573 104 HOH HOH . 
R 5 HOH C 100 574 105 HOH HOH . 
R 5 HOH C 101 575 106 HOH HOH . 
R 5 HOH C 102 576 107 HOH HOH . 
R 5 HOH C 103 577 108 HOH HOH . 
R 5 HOH C 104 578 109 HOH HOH . 
R 5 HOH C 105 579 110 HOH HOH . 
R 5 HOH C 106 580 111 HOH HOH . 
R 5 HOH C 107 581 112 HOH HOH . 
R 5 HOH C 108 582 113 HOH HOH . 
R 5 HOH C 109 583 114 HOH HOH . 
R 5 HOH C 110 584 115 HOH HOH . 
R 5 HOH C 111 585 117 HOH HOH . 
R 5 HOH C 112 586 118 HOH HOH . 
R 5 HOH C 113 587 119 HOH HOH . 
R 5 HOH C 114 588 120 HOH HOH . 
R 5 HOH C 115 589 121 HOH HOH . 
R 5 HOH C 116 590 122 HOH HOH . 
R 5 HOH C 117 591 123 HOH HOH . 
R 5 HOH C 118 592 124 HOH HOH . 
R 5 HOH C 119 593 125 HOH HOH . 
R 5 HOH C 120 594 126 HOH HOH . 
R 5 HOH C 121 595 127 HOH HOH . 
R 5 HOH C 122 596 128 HOH HOH . 
R 5 HOH C 123 597 129 HOH HOH . 
R 5 HOH C 124 598 130 HOH HOH . 
R 5 HOH C 125 599 131 HOH HOH . 
R 5 HOH C 126 600 132 HOH HOH . 
R 5 HOH C 127 601 133 HOH HOH . 
R 5 HOH C 128 602 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . H 4 8.614 42.4 -33.383 1 49.28 ? C1 EDO 5 C 1 
HETATM 2 O O1 EDO . . . H 4 9.971 42.412 -33.794 1 48.52 ? O1 EDO 5 C 1 
HETATM 3 C C2 EDO . . . H 4 8.268 40.948 -33.106 1 47.8 ? C2 EDO 5 C 1 
HETATM 4 O O2 EDO . . . H 4 7.467 40.93 -31.942 1 41.86 ? O2 EDO 5 C 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#