data_3BRN
#
_model_server_result.job_id            -rpJ5slT11LpJAElgQcUJQ 
_model_server_result.datetime_utc      '2024-11-05 00:02:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3brn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":158}' 
#
_entry.id    3BRN 
#
_exptl.entry_id    3BRN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              176.215 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            SEROTONIN 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3BRN 
_cell.length_a            91.694 
_cell.length_b            91.694 
_cell.length_c            37.836 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BRN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 131 A CYS 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 153 A CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf3 A SG CYS 105 A CYS 105 1_555 A SG CYS 132 A CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf4 B SG CYS 7 B CYS 7 1_555 B SG CYS 131 B CYS 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
disulf ? disulf5 B SG CYS 40 B CYS 40 1_555 B SG CYS 153 B CYS 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf6 B SG CYS 105 B CYS 105 1_555 B SG CYS 132 B CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
#
_chem_comp.formula           'C10 H12 N2 O' 
_chem_comp.formula_weight    176.215 
_chem_comp.id                SRO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              SEROTONIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-(2-AMINOETHYL)-1H-INDOL-5-OL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH CZ3 SRO sing 290 n n 
OH HOH SRO sing 291 n n 
CZ3 CE3 SRO doub 292 n y 
CZ3 CH2 SRO sing 293 n y 
CH2 CZ2 SRO doub 294 n y 
CH2 HH2 SRO sing 295 n n 
CZ2 CE2 SRO sing 296 n y 
CZ2 HZ2 SRO sing 297 n n 
CE2 NE1 SRO sing 298 n y 
CE2 CD2 SRO doub 299 n y 
NE1 CD1 SRO sing 300 n y 
NE1 HNE1 SRO sing 301 n n 
CD1 CG SRO doub 302 n y 
CD1 HD1 SRO sing 303 n n 
CG CB SRO sing 304 n n 
CG CD2 SRO sing 305 n y 
CD2 CE3 SRO sing 306 n y 
CE3 HE3 SRO sing 307 n n 
CB CA SRO sing 308 n n 
CB HB1 SRO sing 309 n n 
CB HB2 SRO sing 310 n n 
CA NZ SRO sing 311 n n 
CA HA1 SRO sing 312 n n 
CA HA2 SRO sing 313 n n 
NZ HNZ1 SRO sing 314 n n 
NZ HNZ2 SRO sing 315 n n 
#
_atom_sites.entry_id                     3BRN 
_atom_sites.fract_transf_matrix[1][1]    0.010906 
_atom_sites.fract_transf_matrix[1][2]    0.006296 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012593 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.02643 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SRO A 1 158 1 SRO SRO . 
D 2 SRO B 1 158 1 SRO SRO . 
E 3 HOH A 1 159 1 HOH HOH . 
E 3 HOH A 2 160 3 HOH HOH . 
E 3 HOH A 3 161 4 HOH HOH . 
E 3 HOH A 4 162 7 HOH HOH . 
E 3 HOH A 5 163 10 HOH HOH . 
E 3 HOH A 6 164 13 HOH HOH . 
E 3 HOH A 7 165 14 HOH HOH . 
E 3 HOH A 8 166 15 HOH HOH . 
E 3 HOH A 9 167 16 HOH HOH . 
E 3 HOH A 10 168 18 HOH HOH . 
E 3 HOH A 11 169 23 HOH HOH . 
E 3 HOH A 12 170 24 HOH HOH . 
E 3 HOH A 13 171 25 HOH HOH . 
E 3 HOH A 14 172 26 HOH HOH . 
E 3 HOH A 15 173 27 HOH HOH . 
E 3 HOH A 16 174 28 HOH HOH . 
E 3 HOH A 17 175 29 HOH HOH . 
E 3 HOH A 18 176 30 HOH HOH . 
E 3 HOH A 19 177 32 HOH HOH . 
E 3 HOH A 20 178 33 HOH HOH . 
E 3 HOH A 21 179 34 HOH HOH . 
E 3 HOH A 22 180 37 HOH HOH . 
E 3 HOH A 23 181 41 HOH HOH . 
E 3 HOH A 24 182 42 HOH HOH . 
E 3 HOH A 25 183 45 HOH HOH . 
E 3 HOH A 26 184 47 HOH HOH . 
E 3 HOH A 27 185 48 HOH HOH . 
E 3 HOH A 28 186 49 HOH HOH . 
E 3 HOH A 29 187 50 HOH HOH . 
E 3 HOH A 30 188 52 HOH HOH . 
E 3 HOH A 31 189 54 HOH HOH . 
E 3 HOH A 32 190 55 HOH HOH . 
E 3 HOH A 33 191 56 HOH HOH . 
E 3 HOH A 34 192 57 HOH HOH . 
E 3 HOH A 35 193 59 HOH HOH . 
E 3 HOH A 36 194 60 HOH HOH . 
E 3 HOH A 37 195 62 HOH HOH . 
E 3 HOH A 38 196 65 HOH HOH . 
E 3 HOH A 39 197 69 HOH HOH . 
E 3 HOH A 40 198 70 HOH HOH . 
E 3 HOH A 41 199 73 HOH HOH . 
E 3 HOH A 42 200 74 HOH HOH . 
E 3 HOH A 43 201 77 HOH HOH . 
E 3 HOH A 44 202 79 HOH HOH . 
E 3 HOH A 45 203 81 HOH HOH . 
E 3 HOH A 46 204 84 HOH HOH . 
E 3 HOH A 47 205 89 HOH HOH . 
E 3 HOH A 48 206 93 HOH HOH . 
E 3 HOH A 49 207 95 HOH HOH . 
E 3 HOH A 50 208 98 HOH HOH . 
F 3 HOH B 1 159 2 HOH HOH . 
F 3 HOH B 2 160 5 HOH HOH . 
F 3 HOH B 3 161 6 HOH HOH . 
F 3 HOH B 4 162 11 HOH HOH . 
F 3 HOH B 5 163 12 HOH HOH . 
F 3 HOH B 6 164 19 HOH HOH . 
F 3 HOH B 7 165 20 HOH HOH . 
F 3 HOH B 8 166 21 HOH HOH . 
F 3 HOH B 9 167 35 HOH HOH . 
F 3 HOH B 10 168 36 HOH HOH . 
F 3 HOH B 11 169 38 HOH HOH . 
F 3 HOH B 12 170 39 HOH HOH . 
F 3 HOH B 13 171 40 HOH HOH . 
F 3 HOH B 14 172 43 HOH HOH . 
F 3 HOH B 15 173 44 HOH HOH . 
F 3 HOH B 16 174 46 HOH HOH . 
F 3 HOH B 17 175 53 HOH HOH . 
F 3 HOH B 18 176 61 HOH HOH . 
F 3 HOH B 19 177 63 HOH HOH . 
F 3 HOH B 20 178 64 HOH HOH . 
F 3 HOH B 21 179 66 HOH HOH . 
F 3 HOH B 22 180 67 HOH HOH . 
F 3 HOH B 23 181 68 HOH HOH . 
F 3 HOH B 24 182 72 HOH HOH . 
F 3 HOH B 25 183 75 HOH HOH . 
F 3 HOH B 26 184 76 HOH HOH . 
F 3 HOH B 27 185 78 HOH HOH . 
F 3 HOH B 28 186 80 HOH HOH . 
F 3 HOH B 29 187 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH SRO . . . C 2 -8.126 31.785 -10.848 1 30.72 ? OH SRO 158 A 1 
HETATM 2 C CZ3 SRO . . . C 2 -8.061 33.132 -10.586 1 20.96 ? CZ3 SRO 158 A 1 
HETATM 3 C CH2 SRO . . . C 2 -7.047 33.572 -9.739 1 22.3 ? CH2 SRO 158 A 1 
HETATM 4 C CZ2 SRO . . . C 2 -6.851 34.939 -9.527 1 29.99 ? CZ2 SRO 158 A 1 
HETATM 5 C CE2 SRO . . . C 2 -7.747 35.806 -10.134 1 20.32 ? CE2 SRO 158 A 1 
HETATM 6 N NE1 SRO . . . C 2 -7.92 37.152 -10.121 1 19 ? NE1 SRO 158 A 1 
HETATM 7 C CD1 SRO . . . C 2 -8.958 37.478 -10.927 1 18.43 ? CD1 SRO 158 A 1 
HETATM 8 C CG SRO . . . C 2 -9.498 36.304 -11.454 1 20.61 ? CG SRO 158 A 1 
HETATM 9 C CD2 SRO . . . C 2 -8.739 35.26 -10.931 1 25.2 ? CD2 SRO 158 A 1 
HETATM 10 C CE3 SRO . . . C 2 -8.88 33.975 -11.14 1 28.32 ? CE3 SRO 158 A 1 
HETATM 11 C CB SRO . . . C 2 -10.695 36.209 -12.368 1 25.24 ? CB SRO 158 A 1 
HETATM 12 C CA SRO . . . C 2 -11.865 35.51 -11.648 1 24.56 ? CA SRO 158 A 1 
HETATM 13 N NZ SRO . . . C 2 -12.943 35.287 -12.617 1 24.95 ? NZ SRO 158 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           13 
#