data_3BS3
#
_model_server_result.job_id            Gsj1B-6jruHlV0dh9_pmjg 
_model_server_result.datetime_utc      '2025-04-06 05:05:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bs3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":102}' 
#
_entry.id    3BS3 
#
_exptl.entry_id    3BS3 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3BS3 
_cell.length_a            63.337 
_cell.length_b            63.337 
_cell.length_c            34.706 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BS3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_674 x-y+1,-y+2,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 109.702902 -11.568667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 10 A MSE 7 1_555 A N MSE 11 A MSE 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale2 A C MSE 11 A MSE 8 1_555 A N LEU 12 A LEU 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 A C GLN 32 A GLN 29 1_555 A N MSE 33 A MSE 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale4 A C MSE 33 A MSE 30 1_555 A N GLY 34 A GLY 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 A C ASP 53 A ASP 50 1_555 A N MSE 54 A MSE 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 A C MSE 54 A MSE 51 1_555 A N LEU 55 A LEU 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3BS3 
_atom_sites.fract_transf_matrix[1][1]    0.015789 
_atom_sites.fract_transf_matrix[1][2]    0.009116 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018231 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.028813 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 101 101 SO4 SO4 . 
C 3 EDO A 1 102 102 EDO EDO . 
D 4 HOH A 1 103 1 HOH HOH . 
D 4 HOH A 2 104 2 HOH HOH . 
D 4 HOH A 3 105 3 HOH HOH . 
D 4 HOH A 4 106 4 HOH HOH . 
D 4 HOH A 5 107 5 HOH HOH . 
D 4 HOH A 6 108 6 HOH HOH . 
D 4 HOH A 7 109 7 HOH HOH . 
D 4 HOH A 8 110 8 HOH HOH . 
D 4 HOH A 9 111 9 HOH HOH . 
D 4 HOH A 10 112 10 HOH HOH . 
D 4 HOH A 11 113 11 HOH HOH . 
D 4 HOH A 12 114 12 HOH HOH . 
D 4 HOH A 13 115 13 HOH HOH . 
D 4 HOH A 14 116 14 HOH HOH . 
D 4 HOH A 15 117 15 HOH HOH . 
D 4 HOH A 16 118 16 HOH HOH . 
D 4 HOH A 17 119 17 HOH HOH . 
D 4 HOH A 18 120 18 HOH HOH . 
D 4 HOH A 19 121 19 HOH HOH . 
D 4 HOH A 20 122 20 HOH HOH . 
D 4 HOH A 21 123 21 HOH HOH . 
D 4 HOH A 22 124 22 HOH HOH . 
D 4 HOH A 23 125 23 HOH HOH . 
D 4 HOH A 24 126 24 HOH HOH . 
D 4 HOH A 25 127 25 HOH HOH . 
D 4 HOH A 26 128 26 HOH HOH . 
D 4 HOH A 27 129 27 HOH HOH . 
D 4 HOH A 28 130 28 HOH HOH . 
D 4 HOH A 29 131 29 HOH HOH . 
D 4 HOH A 30 132 30 HOH HOH . 
D 4 HOH A 31 133 31 HOH HOH . 
D 4 HOH A 32 134 32 HOH HOH . 
D 4 HOH A 33 135 33 HOH HOH . 
D 4 HOH A 34 136 34 HOH HOH . 
D 4 HOH A 35 137 35 HOH HOH . 
D 4 HOH A 36 138 36 HOH HOH . 
D 4 HOH A 37 139 37 HOH HOH . 
D 4 HOH A 38 140 38 HOH HOH . 
D 4 HOH A 39 141 39 HOH HOH . 
D 4 HOH A 40 142 40 HOH HOH . 
D 4 HOH A 41 143 41 HOH HOH . 
D 4 HOH A 42 144 42 HOH HOH . 
D 4 HOH A 43 145 43 HOH HOH . 
D 4 HOH A 44 146 44 HOH HOH . 
D 4 HOH A 45 147 45 HOH HOH . 
D 4 HOH A 46 148 46 HOH HOH . 
D 4 HOH A 47 149 47 HOH HOH . 
D 4 HOH A 48 150 48 HOH HOH . 
D 4 HOH A 49 151 49 HOH HOH . 
D 4 HOH A 50 152 50 HOH HOH . 
D 4 HOH A 51 153 51 HOH HOH . 
D 4 HOH A 52 154 52 HOH HOH . 
D 4 HOH A 53 155 53 HOH HOH . 
D 4 HOH A 54 156 54 HOH HOH . 
D 4 HOH A 55 157 55 HOH HOH . 
D 4 HOH A 56 158 56 HOH HOH . 
D 4 HOH A 57 159 57 HOH HOH . 
D 4 HOH A 58 160 58 HOH HOH . 
D 4 HOH A 59 161 59 HOH HOH . 
D 4 HOH A 60 162 60 HOH HOH . 
D 4 HOH A 61 163 61 HOH HOH . 
D 4 HOH A 62 164 62 HOH HOH . 
D 4 HOH A 63 165 63 HOH HOH . 
D 4 HOH A 64 166 64 HOH HOH . 
D 4 HOH A 65 167 65 HOH HOH . 
D 4 HOH A 66 168 66 HOH HOH . 
D 4 HOH A 67 169 67 HOH HOH . 
D 4 HOH A 68 170 68 HOH HOH . 
D 4 HOH A 69 171 69 HOH HOH . 
D 4 HOH A 70 172 70 HOH HOH . 
D 4 HOH A 71 173 71 HOH HOH . 
D 4 HOH A 72 174 72 HOH HOH . 
D 4 HOH A 73 175 73 HOH HOH . 
D 4 HOH A 74 176 74 HOH HOH . 
D 4 HOH A 75 177 75 HOH HOH . 
D 4 HOH A 76 178 76 HOH HOH . 
D 4 HOH A 77 179 77 HOH HOH . 
D 4 HOH A 78 180 78 HOH HOH . 
D 4 HOH A 79 181 79 HOH HOH . 
D 4 HOH A 80 182 80 HOH HOH . 
D 4 HOH A 81 183 81 HOH HOH . 
D 4 HOH A 82 184 82 HOH HOH . 
D 4 HOH A 83 185 83 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 -7.296 48.85 -9.821 1 75.96 ? C1 EDO 102 A 1 
HETATM 2 O O1 EDO . . . C 3 -6.167 49.32 -9.076 1 75.57 ? O1 EDO 102 A 1 
HETATM 3 C C2 EDO . . . C 3 -7.098 47.382 -10.173 1 76.01 ? C2 EDO 102 A 1 
HETATM 4 O O2 EDO . . . C 3 -7.898 47.05 -11.315 1 76.41 ? O2 EDO 102 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           242 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#