data_3BU1
#
_model_server_result.job_id            PRGcyVAXWg63Wo5lAnypjA 
_model_server_result.datetime_utc      '2024-11-24 09:00:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3bu1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    3BU1 
#
_exptl.entry_id    3BU1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              111.145 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            HISTAMINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BU1 
_cell.length_a            36.418 
_cell.length_b            56.324 
_cell.length_c            58.774 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BU1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 A CYS 4 1_555 A SG CYS 121 A CYS 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 35 A CYS 34 1_555 A SG CYS 143 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 A SG CYS 94 A CYS 93 1_555 A SG CYS 122 A CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
#
_chem_comp.formula           'C5 H9 N3' 
_chem_comp.formula_weight    111.145 
_chem_comp.id                HSM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              HISTAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA HSM sing 152 n n 
N H1 HSM sing 153 n n 
N H2 HSM sing 154 n n 
CA CB HSM sing 155 n n 
CA HA1 HSM sing 156 n n 
CA HA2 HSM sing 157 n n 
CB CG HSM sing 158 n n 
CB HB1 HSM sing 159 n n 
CB HB2 HSM sing 160 n n 
CG ND1 HSM sing 161 n y 
CG CD2 HSM doub 162 n y 
ND1 CE1 HSM doub 163 n y 
CD2 NE2 HSM sing 164 n y 
CD2 HD2 HSM sing 165 n n 
CE1 NE2 HSM sing 166 n y 
CE1 HE1 HSM sing 167 n n 
NE2 HE2 HSM sing 168 n n 
#
_atom_sites.entry_id                     3BU1 
_atom_sites.fract_transf_matrix[1][1]    0.027459 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017754 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017014 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 300 300 SO4 SO4 . 
C 3 HSM A 1 301 1 HSM HSM . 
D 4 HOH A 1 302 1 HOH HOH . 
D 4 HOH A 2 303 2 HOH HOH . 
D 4 HOH A 3 304 3 HOH HOH . 
D 4 HOH A 4 305 4 HOH HOH . 
D 4 HOH A 5 306 5 HOH HOH . 
D 4 HOH A 6 307 6 HOH HOH . 
D 4 HOH A 7 308 7 HOH HOH . 
D 4 HOH A 8 309 8 HOH HOH . 
D 4 HOH A 9 310 9 HOH HOH . 
D 4 HOH A 10 311 10 HOH HOH . 
D 4 HOH A 11 312 11 HOH HOH . 
D 4 HOH A 12 313 12 HOH HOH . 
D 4 HOH A 13 314 13 HOH HOH . 
D 4 HOH A 14 315 14 HOH HOH . 
D 4 HOH A 15 316 15 HOH HOH . 
D 4 HOH A 16 317 18 HOH HOH . 
D 4 HOH A 17 318 19 HOH HOH . 
D 4 HOH A 18 319 22 HOH HOH . 
D 4 HOH A 19 320 23 HOH HOH . 
D 4 HOH A 20 321 24 HOH HOH . 
D 4 HOH A 21 322 25 HOH HOH . 
D 4 HOH A 22 323 26 HOH HOH . 
D 4 HOH A 23 324 27 HOH HOH . 
D 4 HOH A 24 325 28 HOH HOH . 
D 4 HOH A 25 326 29 HOH HOH . 
D 4 HOH A 26 327 30 HOH HOH . 
D 4 HOH A 27 328 31 HOH HOH . 
D 4 HOH A 28 329 32 HOH HOH . 
D 4 HOH A 29 330 33 HOH HOH . 
D 4 HOH A 30 331 34 HOH HOH . 
D 4 HOH A 31 332 36 HOH HOH . 
D 4 HOH A 32 333 37 HOH HOH . 
D 4 HOH A 33 334 38 HOH HOH . 
D 4 HOH A 34 335 39 HOH HOH . 
D 4 HOH A 35 336 40 HOH HOH . 
D 4 HOH A 36 337 41 HOH HOH . 
D 4 HOH A 37 338 42 HOH HOH . 
D 4 HOH A 38 339 43 HOH HOH . 
D 4 HOH A 39 340 44 HOH HOH . 
D 4 HOH A 40 341 46 HOH HOH . 
D 4 HOH A 41 342 47 HOH HOH . 
D 4 HOH A 42 343 48 HOH HOH . 
D 4 HOH A 43 344 49 HOH HOH . 
D 4 HOH A 44 345 50 HOH HOH . 
D 4 HOH A 45 346 51 HOH HOH . 
D 4 HOH A 46 347 53 HOH HOH . 
D 4 HOH A 47 348 54 HOH HOH . 
D 4 HOH A 48 349 55 HOH HOH . 
D 4 HOH A 49 350 58 HOH HOH . 
D 4 HOH A 50 351 59 HOH HOH . 
D 4 HOH A 51 352 60 HOH HOH . 
D 4 HOH A 52 353 61 HOH HOH . 
D 4 HOH A 53 354 62 HOH HOH . 
D 4 HOH A 54 355 63 HOH HOH . 
D 4 HOH A 55 356 64 HOH HOH . 
D 4 HOH A 56 357 65 HOH HOH . 
D 4 HOH A 57 358 66 HOH HOH . 
D 4 HOH A 58 359 67 HOH HOH . 
D 4 HOH A 59 360 68 HOH HOH . 
D 4 HOH A 60 361 69 HOH HOH . 
D 4 HOH A 61 362 70 HOH HOH . 
D 4 HOH A 62 363 71 HOH HOH . 
D 4 HOH A 63 364 72 HOH HOH . 
D 4 HOH A 64 365 73 HOH HOH . 
D 4 HOH A 65 366 75 HOH HOH . 
D 4 HOH A 66 367 76 HOH HOH . 
D 4 HOH A 67 368 77 HOH HOH . 
D 4 HOH A 68 369 78 HOH HOH . 
D 4 HOH A 69 370 79 HOH HOH . 
D 4 HOH A 70 371 80 HOH HOH . 
D 4 HOH A 71 372 81 HOH HOH . 
D 4 HOH A 72 373 82 HOH HOH . 
D 4 HOH A 73 374 83 HOH HOH . 
D 4 HOH A 74 375 85 HOH HOH . 
D 4 HOH A 75 376 86 HOH HOH . 
D 4 HOH A 76 377 87 HOH HOH . 
D 4 HOH A 77 378 88 HOH HOH . 
D 4 HOH A 78 379 89 HOH HOH . 
D 4 HOH A 79 380 90 HOH HOH . 
D 4 HOH A 80 381 91 HOH HOH . 
D 4 HOH A 81 382 92 HOH HOH . 
D 4 HOH A 82 383 93 HOH HOH . 
D 4 HOH A 83 384 94 HOH HOH . 
D 4 HOH A 84 385 95 HOH HOH . 
D 4 HOH A 85 386 96 HOH HOH . 
D 4 HOH A 86 387 97 HOH HOH . 
D 4 HOH A 87 388 98 HOH HOH . 
D 4 HOH A 88 389 99 HOH HOH . 
D 4 HOH A 89 390 100 HOH HOH . 
D 4 HOH A 90 391 101 HOH HOH . 
D 4 HOH A 91 392 102 HOH HOH . 
D 4 HOH A 92 393 103 HOH HOH . 
D 4 HOH A 93 394 104 HOH HOH . 
D 4 HOH A 94 395 105 HOH HOH . 
D 4 HOH A 95 396 106 HOH HOH . 
D 4 HOH A 96 397 107 HOH HOH . 
D 4 HOH A 97 398 108 HOH HOH . 
D 4 HOH A 98 399 109 HOH HOH . 
D 4 HOH A 99 400 110 HOH HOH . 
D 4 HOH A 100 401 111 HOH HOH . 
D 4 HOH A 101 402 112 HOH HOH . 
D 4 HOH A 102 403 113 HOH HOH . 
D 4 HOH A 103 404 114 HOH HOH . 
D 4 HOH A 104 405 116 HOH HOH . 
D 4 HOH A 105 406 117 HOH HOH . 
D 4 HOH A 106 407 118 HOH HOH . 
D 4 HOH A 107 408 120 HOH HOH . 
D 4 HOH A 108 409 121 HOH HOH . 
D 4 HOH A 109 410 122 HOH HOH . 
D 4 HOH A 110 411 124 HOH HOH . 
D 4 HOH A 111 412 125 HOH HOH . 
D 4 HOH A 112 413 126 HOH HOH . 
D 4 HOH A 113 414 128 HOH HOH . 
D 4 HOH A 114 415 129 HOH HOH . 
D 4 HOH A 115 416 130 HOH HOH . 
D 4 HOH A 116 417 131 HOH HOH . 
D 4 HOH A 117 418 132 HOH HOH . 
D 4 HOH A 118 419 134 HOH HOH . 
D 4 HOH A 119 420 136 HOH HOH . 
D 4 HOH A 120 421 137 HOH HOH . 
D 4 HOH A 121 422 138 HOH HOH . 
D 4 HOH A 122 423 139 HOH HOH . 
D 4 HOH A 123 424 140 HOH HOH . 
D 4 HOH A 124 425 141 HOH HOH . 
D 4 HOH A 125 426 143 HOH HOH . 
D 4 HOH A 126 427 145 HOH HOH . 
D 4 HOH A 127 428 146 HOH HOH . 
D 4 HOH A 128 429 147 HOH HOH . 
D 4 HOH A 129 430 149 HOH HOH . 
D 4 HOH A 130 431 152 HOH HOH . 
D 4 HOH A 131 432 153 HOH HOH . 
D 4 HOH A 132 433 155 HOH HOH . 
D 4 HOH A 133 434 156 HOH HOH . 
D 4 HOH A 134 435 157 HOH HOH . 
D 4 HOH A 135 436 158 HOH HOH . 
D 4 HOH A 136 437 160 HOH HOH . 
D 4 HOH A 137 438 162 HOH HOH . 
D 4 HOH A 138 439 163 HOH HOH . 
D 4 HOH A 139 440 164 HOH HOH . 
D 4 HOH A 140 441 165 HOH HOH . 
D 4 HOH A 141 442 166 HOH HOH . 
D 4 HOH A 142 443 167 HOH HOH . 
D 4 HOH A 143 444 169 HOH HOH . 
D 4 HOH A 144 445 170 HOH HOH . 
D 4 HOH A 145 446 172 HOH HOH . 
D 4 HOH A 146 447 173 HOH HOH . 
D 4 HOH A 147 448 176 HOH HOH . 
D 4 HOH A 148 449 178 HOH HOH . 
D 4 HOH A 149 450 179 HOH HOH . 
D 4 HOH A 150 451 181 HOH HOH . 
D 4 HOH A 151 452 182 HOH HOH . 
D 4 HOH A 152 453 183 HOH HOH . 
D 4 HOH A 153 454 184 HOH HOH . 
D 4 HOH A 154 455 185 HOH HOH . 
D 4 HOH A 155 456 186 HOH HOH . 
D 4 HOH A 156 457 189 HOH HOH . 
D 4 HOH A 157 458 191 HOH HOH . 
D 4 HOH A 158 459 197 HOH HOH . 
D 4 HOH A 159 460 198 HOH HOH . 
D 4 HOH A 160 461 199 HOH HOH . 
D 4 HOH A 161 462 200 HOH HOH . 
D 4 HOH A 162 463 201 HOH HOH . 
D 4 HOH A 163 464 202 HOH HOH . 
D 4 HOH A 164 465 203 HOH HOH . 
D 4 HOH A 165 466 204 HOH HOH . 
D 4 HOH A 166 467 205 HOH HOH . 
D 4 HOH A 167 468 206 HOH HOH . 
D 4 HOH A 168 469 208 HOH HOH . 
D 4 HOH A 169 470 209 HOH HOH . 
D 4 HOH A 170 471 210 HOH HOH . 
D 4 HOH A 171 472 211 HOH HOH . 
D 4 HOH A 172 473 212 HOH HOH . 
D 4 HOH A 173 474 213 HOH HOH . 
D 4 HOH A 174 475 214 HOH HOH . 
D 4 HOH A 175 476 215 HOH HOH . 
D 4 HOH A 176 477 216 HOH HOH . 
D 4 HOH A 177 478 217 HOH HOH . 
D 4 HOH A 178 479 218 HOH HOH . 
D 4 HOH A 179 480 219 HOH HOH . 
D 4 HOH A 180 481 220 HOH HOH . 
D 4 HOH A 181 482 221 HOH HOH . 
D 4 HOH A 182 483 222 HOH HOH . 
D 4 HOH A 183 484 223 HOH HOH . 
D 4 HOH A 184 485 224 HOH HOH . 
D 4 HOH A 185 486 225 HOH HOH . 
D 4 HOH A 186 487 226 HOH HOH . 
D 4 HOH A 187 488 227 HOH HOH . 
D 4 HOH A 188 489 228 HOH HOH . 
D 4 HOH A 189 490 229 HOH HOH . 
D 4 HOH A 190 491 230 HOH HOH . 
D 4 HOH A 191 492 231 HOH HOH . 
D 4 HOH A 192 493 232 HOH HOH . 
D 4 HOH A 193 494 233 HOH HOH . 
D 4 HOH A 194 495 234 HOH HOH . 
D 4 HOH A 195 496 235 HOH HOH . 
D 4 HOH A 196 497 236 HOH HOH . 
D 4 HOH A 197 498 237 HOH HOH . 
D 4 HOH A 198 499 238 HOH HOH . 
D 4 HOH A 199 500 239 HOH HOH . 
D 4 HOH A 200 501 240 HOH HOH . 
D 4 HOH A 201 502 241 HOH HOH . 
D 4 HOH A 202 503 242 HOH HOH . 
D 4 HOH A 203 504 243 HOH HOH . 
D 4 HOH A 204 505 244 HOH HOH . 
D 4 HOH A 205 506 245 HOH HOH . 
D 4 HOH A 206 507 246 HOH HOH . 
D 4 HOH A 207 508 247 HOH HOH . 
D 4 HOH A 208 509 248 HOH HOH . 
D 4 HOH A 209 510 249 HOH HOH . 
D 4 HOH A 210 511 250 HOH HOH . 
D 4 HOH A 211 512 251 HOH HOH . 
D 4 HOH A 212 513 252 HOH HOH . 
D 4 HOH A 213 514 253 HOH HOH . 
D 4 HOH A 214 515 254 HOH HOH . 
D 4 HOH A 215 516 255 HOH HOH . 
D 4 HOH A 216 517 256 HOH HOH . 
D 4 HOH A 217 518 257 HOH HOH . 
D 4 HOH A 218 519 258 HOH HOH . 
D 4 HOH A 219 520 259 HOH HOH . 
D 4 HOH A 220 521 260 HOH HOH . 
D 4 HOH A 221 522 261 HOH HOH . 
D 4 HOH A 222 523 262 HOH HOH . 
D 4 HOH A 223 524 263 HOH HOH . 
D 4 HOH A 224 525 264 HOH HOH . 
D 4 HOH A 225 526 265 HOH HOH . 
D 4 HOH A 226 527 266 HOH HOH . 
D 4 HOH A 227 528 267 HOH HOH . 
D 4 HOH A 228 529 268 HOH HOH . 
D 4 HOH A 229 530 269 HOH HOH . 
D 4 HOH A 230 531 270 HOH HOH . 
D 4 HOH A 231 532 271 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N HSM . . . C 3 18.175 22.985 7.587 1 4.38 ? N HSM 301 A 1 
HETATM 2 C CA HSM . . . C 3 17.361 23.139 8.789 1 4.38 ? CA HSM 301 A 1 
HETATM 3 C CB HSM . . . C 3 16.283 24.187 8.548 1 4.74 ? CB HSM 301 A 1 
HETATM 4 C CG HSM . . . C 3 15.502 24.482 9.812 1 4.31 ? CG HSM 301 A 1 
HETATM 5 N ND1 HSM . . . C 3 16.004 24.986 10.967 1 4.81 ? ND1 HSM 301 A 1 
HETATM 6 C CD2 HSM . . . C 3 14.143 24.29 9.997 1 5.03 ? CD2 HSM 301 A 1 
HETATM 7 C CE1 HSM . . . C 3 14.99 25.106 11.847 1 4.97 ? CE1 HSM 301 A 1 
HETATM 8 N NE2 HSM . . . C 3 13.851 24.683 11.256 1 5.11 ? NE2 HSM 301 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           230 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           8 
#