data_3BUZ # _model_server_result.job_id zUv7WBnr6Hcg6I9GcXHXPg _model_server_result.datetime_utc '2024-12-01 10:18:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3buz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 3BUZ # _exptl.entry_id 3BUZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 667.48 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BUZ _cell.length_a 57.014 _cell.length_b 126.344 _cell.length_c 147.127 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BUZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E O1G ATP . B ATP 380 1_555 D CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc2 E O3G ATP . B ATP 380 1_555 D CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc3 E O2B ATP . B ATP 380 1_555 D CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc4 D CA CA . B CA 500 1_555 H O HOH . B HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc5 D CA CA . B CA 500 1_555 H O HOH . B HOH 930 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc6 D CA CA . B CA 500 1_555 H O HOH . B HOH 931 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc7 D CA CA . B CA 500 1_555 H O HOH . B HOH 936 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? # _chem_comp.formula 'C20 H27 N7 O13 P2 S' _chem_comp.formula_weight 667.48 _chem_comp.id TAD _chem_comp.mon_nstd_flag . _chem_comp.name 'BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A TAD doub 401 n n PA O2A TAD sing 402 n n PA O5B TAD sing 403 n n PA C3 TAD sing 404 n n O2A HOA2 TAD sing 405 n n O5B C5B TAD sing 406 n n C5B C4B TAD sing 407 n n C5B H51A TAD sing 408 n n C5B H52A TAD sing 409 n n C4B O4B TAD sing 410 n n C4B C3B TAD sing 411 n n C4B H4B TAD sing 412 n n O4B C1B TAD sing 413 n n C3B O3B TAD sing 414 n n C3B C2B TAD sing 415 n n C3B H3B TAD sing 416 n n O3B HO3A TAD sing 417 n n C2B O2B TAD sing 418 n n C2B C1B TAD sing 419 n n C2B H2B TAD sing 420 n n O2B HO2A TAD sing 421 n n C1B N9A TAD sing 422 n n C1B H1B TAD sing 423 n n N9A C8A TAD sing 424 n y N9A C4A TAD sing 425 n y C8A N7A TAD doub 426 n y C8A H8A TAD sing 427 n n N7A C5A TAD sing 428 n y C5A C6A TAD sing 429 n y C5A C4A TAD doub 430 n y C6A N6A TAD sing 431 n n C6A N1A TAD doub 432 n y N6A H61A TAD sing 433 n n N6A H62A TAD sing 434 n n N1A C2A TAD sing 435 n y C2A N3A TAD doub 436 n y C2A H2A TAD sing 437 n n N3A C4A TAD sing 438 n y C3 PN TAD sing 439 n n C3 H31 TAD sing 440 n n C3 H32 TAD sing 441 n n PN O1N TAD doub 442 n n PN O2N TAD sing 443 n n PN O5D TAD sing 444 n n O2N HON2 TAD sing 445 n n O5D C5D TAD sing 446 n n C5D C4D TAD sing 447 n n C5D H51N TAD sing 448 n n C5D H52N TAD sing 449 n n C4D O4D TAD sing 450 n n C4D C3D TAD sing 451 n n C4D H4D TAD sing 452 n n O4D C1D TAD sing 453 n n C3D O3D TAD sing 454 n n C3D C2D TAD sing 455 n n C3D H3D TAD sing 456 n n O3D HO3N TAD sing 457 n n C2D O2D TAD sing 458 n n C2D C1D TAD sing 459 n n C2D H2D TAD sing 460 n n O2D HO2N TAD sing 461 n n C1D C2N TAD sing 462 n n C1D H1D TAD sing 463 n n C2N N3N TAD doub 464 n y C2N S1N TAD sing 465 n y N3N C4N TAD sing 466 n y C4N C5N TAD doub 467 n y C4N C6N TAD sing 468 n n C5N S1N TAD sing 469 n y C5N H5N TAD sing 470 n n C6N O6N TAD doub 471 n n C6N N6N TAD sing 472 n n N6N H61N TAD sing 473 n n N6N H62N TAD sing 474 n n # _atom_sites.entry_id 3BUZ _atom_sites.fract_transf_matrix[1][1] 0.01754 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TAD A 1 500 500 TAD TAD . D 4 CA B 1 500 500 CA CA . E 5 ATP B 1 380 380 ATP ATP . F 6 LAR B 1 901 901 LAR LAR . G 7 HOH A 1 501 2 HOH HOH . G 7 HOH A 2 502 3 HOH HOH . G 7 HOH A 3 503 4 HOH HOH . G 7 HOH A 4 504 5 HOH HOH . G 7 HOH A 5 505 9 HOH HOH . G 7 HOH A 6 506 11 HOH HOH . G 7 HOH A 7 507 13 HOH HOH . G 7 HOH A 8 508 14 HOH HOH . G 7 HOH A 9 509 15 HOH HOH . G 7 HOH A 10 510 16 HOH HOH . G 7 HOH A 11 511 18 HOH HOH . G 7 HOH A 12 512 19 HOH HOH . G 7 HOH A 13 513 20 HOH HOH . G 7 HOH A 14 514 22 HOH HOH . G 7 HOH A 15 515 23 HOH HOH . G 7 HOH A 16 516 24 HOH HOH . G 7 HOH A 17 517 27 HOH HOH . G 7 HOH A 18 518 28 HOH HOH . G 7 HOH A 19 519 29 HOH HOH . G 7 HOH A 20 520 31 HOH HOH . G 7 HOH A 21 521 32 HOH HOH . G 7 HOH A 22 522 34 HOH HOH . G 7 HOH A 23 523 35 HOH HOH . G 7 HOH A 24 524 42 HOH HOH . G 7 HOH A 25 525 43 HOH HOH . G 7 HOH A 26 526 45 HOH HOH . G 7 HOH A 27 527 46 HOH HOH . G 7 HOH A 28 528 48 HOH HOH . G 7 HOH A 29 529 52 HOH HOH . G 7 HOH A 30 530 53 HOH HOH . G 7 HOH A 31 531 54 HOH HOH . G 7 HOH A 32 532 55 HOH HOH . G 7 HOH A 33 533 56 HOH HOH . G 7 HOH A 34 534 57 HOH HOH . G 7 HOH A 35 535 58 HOH HOH . G 7 HOH A 36 536 59 HOH HOH . G 7 HOH A 37 537 60 HOH HOH . G 7 HOH A 38 538 61 HOH HOH . G 7 HOH A 39 539 62 HOH HOH . G 7 HOH A 40 540 63 HOH HOH . G 7 HOH A 41 541 77 HOH HOH . H 7 HOH B 1 902 1 HOH HOH . H 7 HOH B 2 903 6 HOH HOH . H 7 HOH B 3 904 7 HOH HOH . H 7 HOH B 4 905 8 HOH HOH . H 7 HOH B 5 906 10 HOH HOH . H 7 HOH B 6 907 12 HOH HOH . H 7 HOH B 7 908 17 HOH HOH . H 7 HOH B 8 909 21 HOH HOH . H 7 HOH B 9 910 25 HOH HOH . H 7 HOH B 10 911 26 HOH HOH . H 7 HOH B 11 912 30 HOH HOH . H 7 HOH B 12 913 33 HOH HOH . H 7 HOH B 13 914 36 HOH HOH . H 7 HOH B 14 915 37 HOH HOH . H 7 HOH B 15 916 38 HOH HOH . H 7 HOH B 16 917 39 HOH HOH . H 7 HOH B 17 918 40 HOH HOH . H 7 HOH B 18 919 41 HOH HOH . H 7 HOH B 19 920 44 HOH HOH . H 7 HOH B 20 921 47 HOH HOH . H 7 HOH B 21 922 49 HOH HOH . H 7 HOH B 22 923 50 HOH HOH . H 7 HOH B 23 924 51 HOH HOH . H 7 HOH B 24 925 64 HOH HOH . H 7 HOH B 25 926 65 HOH HOH . H 7 HOH B 26 927 66 HOH HOH . H 7 HOH B 27 928 67 HOH HOH . H 7 HOH B 28 929 68 HOH HOH . H 7 HOH B 29 930 69 HOH HOH . H 7 HOH B 30 931 70 HOH HOH . H 7 HOH B 31 932 71 HOH HOH . H 7 HOH B 32 933 72 HOH HOH . H 7 HOH B 33 934 73 HOH HOH . H 7 HOH B 34 935 74 HOH HOH . H 7 HOH B 35 936 75 HOH HOH . H 7 HOH B 36 937 76 HOH HOH . H 7 HOH B 37 938 78 HOH HOH . H 7 HOH B 38 939 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA TAD . . . C 3 28.614 49.28 -38.506 1 64.66 ? PA TAD 500 A 1 HETATM 2 O O1A TAD . . . C 3 28.662 50.717 -39.026 1 67.04 ? O1A TAD 500 A 1 HETATM 3 O O2A TAD . . . C 3 27.573 48.758 -37.556 1 64.67 ? O2A TAD 500 A 1 HETATM 4 O O5B TAD . . . C 3 28.41 48.337 -39.815 1 61.67 ? O5B TAD 500 A 1 HETATM 5 C C5B TAD . . . C 3 27.447 47.278 -39.78 1 63.12 ? C5B TAD 500 A 1 HETATM 6 C C4B TAD . . . C 3 26.666 46.962 -41.067 1 64.15 ? C4B TAD 500 A 1 HETATM 7 O O4B TAD . . . C 3 25.615 47.909 -41.361 1 66.07 ? O4B TAD 500 A 1 HETATM 8 C C3B TAD . . . C 3 27.522 46.899 -42.302 1 64.44 ? C3B TAD 500 A 1 HETATM 9 O O3B TAD . . . C 3 26.927 45.928 -43.157 1 61.97 ? O3B TAD 500 A 1 HETATM 10 C C2B TAD . . . C 3 27.322 48.269 -42.909 1 65.68 ? C2B TAD 500 A 1 HETATM 11 O O2B TAD . . . C 3 27.557 48.262 -44.326 1 69.34 ? O2B TAD 500 A 1 HETATM 12 C C1B TAD . . . C 3 25.897 48.665 -42.534 1 64.64 ? C1B TAD 500 A 1 HETATM 13 N N9A TAD . . . C 3 25.917 50.111 -42.229 1 64.51 ? N9A TAD 500 A 1 HETATM 14 C C8A TAD . . . C 3 26.767 50.704 -41.354 1 65.51 ? C8A TAD 500 A 1 HETATM 15 N N7A TAD . . . C 3 26.583 52.051 -41.285 1 66.13 ? N7A TAD 500 A 1 HETATM 16 C C5A TAD . . . C 3 25.576 52.34 -42.156 1 66.26 ? C5A TAD 500 A 1 HETATM 17 C C6A TAD . . . C 3 24.855 53.575 -42.597 1 65 ? C6A TAD 500 A 1 HETATM 18 N N6A TAD . . . C 3 25.183 54.791 -42.097 1 64.11 ? N6A TAD 500 A 1 HETATM 19 N N1A TAD . . . C 3 23.863 53.442 -43.516 1 64.87 ? N1A TAD 500 A 1 HETATM 20 C C2A TAD . . . C 3 23.55 52.234 -44.036 1 65.18 ? C2A TAD 500 A 1 HETATM 21 N N3A TAD . . . C 3 24.156 51.083 -43.68 1 64.12 ? N3A TAD 500 A 1 HETATM 22 C C4A TAD . . . C 3 25.148 51.058 -42.767 1 64.6 ? C4A TAD 500 A 1 HETATM 23 C C3 TAD . . . C 3 30.151 49.241 -37.542 1 62.65 ? C3 TAD 500 A 1 HETATM 24 P PN TAD . . . C 3 30.946 47.721 -38.065 1 62.89 ? PN TAD 500 A 1 HETATM 25 O O1N TAD . . . C 3 31.799 47.934 -39.288 1 60.01 ? O1N TAD 500 A 1 HETATM 26 O O2N TAD . . . C 3 29.837 46.683 -38.149 1 63.52 ? O2N TAD 500 A 1 HETATM 27 O O5D TAD . . . C 3 31.918 47.261 -36.86 1 65.18 ? O5D TAD 500 A 1 HETATM 28 C C5D TAD . . . C 3 32.246 45.88 -36.634 1 66.51 ? C5D TAD 500 A 1 HETATM 29 C C4D TAD . . . C 3 33.084 45.829 -35.381 1 68.07 ? C4D TAD 500 A 1 HETATM 30 O O4D TAD . . . C 3 34.442 46.047 -35.747 1 69.27 ? O4D TAD 500 A 1 HETATM 31 C C3D TAD . . . C 3 32.699 46.941 -34.414 1 69.63 ? C3D TAD 500 A 1 HETATM 32 O O3D TAD . . . C 3 32.823 46.431 -33.077 1 73.25 ? O3D TAD 500 A 1 HETATM 33 C C2D TAD . . . C 3 33.737 48.019 -34.604 1 69.59 ? C2D TAD 500 A 1 HETATM 34 O O2D TAD . . . C 3 34.029 48.574 -33.322 1 67.61 ? O2D TAD 500 A 1 HETATM 35 C C1D TAD . . . C 3 34.931 47.299 -35.235 1 69.48 ? C1D TAD 500 A 1 HETATM 36 C C2N TAD . . . C 3 35.558 48.055 -36.362 1 70.97 ? C2N TAD 500 A 1 HETATM 37 N N3N TAD . . . C 3 35.207 48.19 -37.667 1 71.09 ? N3N TAD 500 A 1 HETATM 38 C C4N TAD . . . C 3 36.058 48.964 -38.392 1 69.01 ? C4N TAD 500 A 1 HETATM 39 C C5N TAD . . . C 3 37.121 49.439 -37.626 1 69.89 ? C5N TAD 500 A 1 HETATM 40 S S1N TAD . . . C 3 37.039 48.892 -35.959 1 71.36 ? S1N TAD 500 A 1 HETATM 41 C C6N TAD . . . C 3 35.835 49.241 -39.834 1 68.02 ? C6N TAD 500 A 1 HETATM 42 O O6N TAD . . . C 3 36.705 49.707 -40.548 1 65.98 ? O6N TAD 500 A 1 HETATM 43 N N6N TAD . . . C 3 34.633 48.959 -40.305 1 66.68 ? N6N TAD 500 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #