data_3BUZ # _model_server_result.job_id J5iQERMp763tTNrftp9Flw _model_server_result.datetime_utc '2024-12-01 10:26:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3buz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":500}' # _entry.id 3BUZ # _exptl.entry_id 3BUZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BUZ _cell.length_a 57.014 _cell.length_b 126.344 _cell.length_c 147.127 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BUZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E O1G ATP . B ATP 380 1_555 D CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc2 E O3G ATP . B ATP 380 1_555 D CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc3 E O2B ATP . B ATP 380 1_555 D CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc4 D CA CA . B CA 500 1_555 H O HOH . B HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc5 D CA CA . B CA 500 1_555 H O HOH . B HOH 930 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc6 D CA CA . B CA 500 1_555 H O HOH . B HOH 931 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc7 D CA CA . B CA 500 1_555 H O HOH . B HOH 936 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3BUZ _atom_sites.fract_transf_matrix[1][1] 0.01754 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007915 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TAD A 1 500 500 TAD TAD . D 4 CA B 1 500 500 CA CA . E 5 ATP B 1 380 380 ATP ATP . F 6 LAR B 1 901 901 LAR LAR . G 7 HOH A 1 501 2 HOH HOH . G 7 HOH A 2 502 3 HOH HOH . G 7 HOH A 3 503 4 HOH HOH . G 7 HOH A 4 504 5 HOH HOH . G 7 HOH A 5 505 9 HOH HOH . G 7 HOH A 6 506 11 HOH HOH . G 7 HOH A 7 507 13 HOH HOH . G 7 HOH A 8 508 14 HOH HOH . G 7 HOH A 9 509 15 HOH HOH . G 7 HOH A 10 510 16 HOH HOH . G 7 HOH A 11 511 18 HOH HOH . G 7 HOH A 12 512 19 HOH HOH . G 7 HOH A 13 513 20 HOH HOH . G 7 HOH A 14 514 22 HOH HOH . G 7 HOH A 15 515 23 HOH HOH . G 7 HOH A 16 516 24 HOH HOH . G 7 HOH A 17 517 27 HOH HOH . G 7 HOH A 18 518 28 HOH HOH . G 7 HOH A 19 519 29 HOH HOH . G 7 HOH A 20 520 31 HOH HOH . G 7 HOH A 21 521 32 HOH HOH . G 7 HOH A 22 522 34 HOH HOH . G 7 HOH A 23 523 35 HOH HOH . G 7 HOH A 24 524 42 HOH HOH . G 7 HOH A 25 525 43 HOH HOH . G 7 HOH A 26 526 45 HOH HOH . G 7 HOH A 27 527 46 HOH HOH . G 7 HOH A 28 528 48 HOH HOH . G 7 HOH A 29 529 52 HOH HOH . G 7 HOH A 30 530 53 HOH HOH . G 7 HOH A 31 531 54 HOH HOH . G 7 HOH A 32 532 55 HOH HOH . G 7 HOH A 33 533 56 HOH HOH . G 7 HOH A 34 534 57 HOH HOH . G 7 HOH A 35 535 58 HOH HOH . G 7 HOH A 36 536 59 HOH HOH . G 7 HOH A 37 537 60 HOH HOH . G 7 HOH A 38 538 61 HOH HOH . G 7 HOH A 39 539 62 HOH HOH . G 7 HOH A 40 540 63 HOH HOH . G 7 HOH A 41 541 77 HOH HOH . H 7 HOH B 1 902 1 HOH HOH . H 7 HOH B 2 903 6 HOH HOH . H 7 HOH B 3 904 7 HOH HOH . H 7 HOH B 4 905 8 HOH HOH . H 7 HOH B 5 906 10 HOH HOH . H 7 HOH B 6 907 12 HOH HOH . H 7 HOH B 7 908 17 HOH HOH . H 7 HOH B 8 909 21 HOH HOH . H 7 HOH B 9 910 25 HOH HOH . H 7 HOH B 10 911 26 HOH HOH . H 7 HOH B 11 912 30 HOH HOH . H 7 HOH B 12 913 33 HOH HOH . H 7 HOH B 13 914 36 HOH HOH . H 7 HOH B 14 915 37 HOH HOH . H 7 HOH B 15 916 38 HOH HOH . H 7 HOH B 16 917 39 HOH HOH . H 7 HOH B 17 918 40 HOH HOH . H 7 HOH B 18 919 41 HOH HOH . H 7 HOH B 19 920 44 HOH HOH . H 7 HOH B 20 921 47 HOH HOH . H 7 HOH B 21 922 49 HOH HOH . H 7 HOH B 22 923 50 HOH HOH . H 7 HOH B 23 924 51 HOH HOH . H 7 HOH B 24 925 64 HOH HOH . H 7 HOH B 25 926 65 HOH HOH . H 7 HOH B 26 927 66 HOH HOH . H 7 HOH B 27 928 67 HOH HOH . H 7 HOH B 28 929 68 HOH HOH . H 7 HOH B 29 930 69 HOH HOH . H 7 HOH B 30 931 70 HOH HOH . H 7 HOH B 31 932 71 HOH HOH . H 7 HOH B 32 933 72 HOH HOH . H 7 HOH B 33 934 73 HOH HOH . H 7 HOH B 34 935 74 HOH HOH . H 7 HOH B 35 936 75 HOH HOH . H 7 HOH B 36 937 76 HOH HOH . H 7 HOH B 37 938 78 HOH HOH . H 7 HOH B 38 939 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 28.998 _atom_site.Cartn_y 30.379 _atom_site.Cartn_z -23.943 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 500 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #