data_3BVM # _model_server_result.job_id 1-lgJbjRE9GhN3MCR9VBFw _model_server_result.datetime_utc '2024-11-27 17:57:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bvm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":240}' # _entry.id 3BVM # _exptl.entry_id 3BVM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BVM _cell.length_a 42.619 _cell.length_b 42.619 _cell.length_c 286.523 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BVM _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 93 A CYS 93 1_555 A SG CYS 108 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc1 A OD2 ASP 83 A ASP 83 1_555 B ZN ZN . A ZN 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc2 A ND1 HIS 116 A HIS 118 1_555 B ZN ZN . A ZN 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc3 A NE2 HIS 120 A HIS 122 1_555 B ZN ZN . A ZN 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3BVM _atom_sites.fract_transf_matrix[1][1] 0.023464 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023464 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00349 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 240 238 ZN ZN . C 3 HOH A 1 241 241 HOH HOH . C 3 HOH A 2 242 242 HOH HOH . C 3 HOH A 3 243 243 HOH HOH . C 3 HOH A 4 244 244 HOH HOH . C 3 HOH A 5 245 245 HOH HOH . C 3 HOH A 6 246 246 HOH HOH . C 3 HOH A 7 247 247 HOH HOH . C 3 HOH A 8 248 248 HOH HOH . C 3 HOH A 9 249 249 HOH HOH . C 3 HOH A 10 250 250 HOH HOH . C 3 HOH A 11 251 251 HOH HOH . C 3 HOH A 12 252 252 HOH HOH . C 3 HOH A 13 253 253 HOH HOH . C 3 HOH A 14 254 254 HOH HOH . C 3 HOH A 15 255 255 HOH HOH . C 3 HOH A 16 256 256 HOH HOH . C 3 HOH A 17 257 257 HOH HOH . C 3 HOH A 18 258 258 HOH HOH . C 3 HOH A 19 259 259 HOH HOH . C 3 HOH A 20 260 260 HOH HOH . C 3 HOH A 21 261 261 HOH HOH . C 3 HOH A 22 262 262 HOH HOH . C 3 HOH A 23 263 263 HOH HOH . C 3 HOH A 24 264 264 HOH HOH . C 3 HOH A 25 265 265 HOH HOH . C 3 HOH A 26 266 266 HOH HOH . C 3 HOH A 27 267 267 HOH HOH . C 3 HOH A 28 268 268 HOH HOH . C 3 HOH A 29 269 269 HOH HOH . C 3 HOH A 30 270 270 HOH HOH . C 3 HOH A 31 271 271 HOH HOH . C 3 HOH A 32 272 272 HOH HOH . C 3 HOH A 33 273 273 HOH HOH . C 3 HOH A 34 274 274 HOH HOH . C 3 HOH A 35 275 275 HOH HOH . C 3 HOH A 36 276 276 HOH HOH . C 3 HOH A 37 277 277 HOH HOH . C 3 HOH A 38 278 278 HOH HOH . C 3 HOH A 39 279 279 HOH HOH . C 3 HOH A 40 280 280 HOH HOH . C 3 HOH A 41 281 281 HOH HOH . C 3 HOH A 42 282 282 HOH HOH . C 3 HOH A 43 283 283 HOH HOH . C 3 HOH A 44 284 284 HOH HOH . C 3 HOH A 45 285 285 HOH HOH . C 3 HOH A 46 286 286 HOH HOH . C 3 HOH A 47 287 287 HOH HOH . C 3 HOH A 48 288 288 HOH HOH . C 3 HOH A 49 289 289 HOH HOH . C 3 HOH A 50 290 290 HOH HOH . C 3 HOH A 51 291 291 HOH HOH . C 3 HOH A 52 292 292 HOH HOH . C 3 HOH A 53 293 293 HOH HOH . C 3 HOH A 54 294 294 HOH HOH . C 3 HOH A 55 295 295 HOH HOH . C 3 HOH A 56 296 296 HOH HOH . C 3 HOH A 57 297 297 HOH HOH . C 3 HOH A 58 298 298 HOH HOH . C 3 HOH A 59 299 299 HOH HOH . C 3 HOH A 60 300 300 HOH HOH . C 3 HOH A 61 301 301 HOH HOH . C 3 HOH A 62 302 302 HOH HOH . C 3 HOH A 63 303 303 HOH HOH . C 3 HOH A 64 304 304 HOH HOH . C 3 HOH A 65 305 305 HOH HOH . C 3 HOH A 66 306 306 HOH HOH . C 3 HOH A 67 307 307 HOH HOH . C 3 HOH A 68 308 308 HOH HOH . C 3 HOH A 69 309 309 HOH HOH . C 3 HOH A 70 310 310 HOH HOH . C 3 HOH A 71 311 311 HOH HOH . C 3 HOH A 72 312 312 HOH HOH . C 3 HOH A 73 313 313 HOH HOH . C 3 HOH A 74 314 314 HOH HOH . C 3 HOH A 75 315 315 HOH HOH . C 3 HOH A 76 316 316 HOH HOH . C 3 HOH A 77 317 317 HOH HOH . C 3 HOH A 78 318 318 HOH HOH . C 3 HOH A 79 319 319 HOH HOH . C 3 HOH A 80 320 320 HOH HOH . C 3 HOH A 81 321 321 HOH HOH . C 3 HOH A 82 322 322 HOH HOH . C 3 HOH A 83 323 323 HOH HOH . C 3 HOH A 84 324 324 HOH HOH . C 3 HOH A 85 325 325 HOH HOH . C 3 HOH A 86 326 326 HOH HOH . C 3 HOH A 87 327 327 HOH HOH . C 3 HOH A 88 328 328 HOH HOH . C 3 HOH A 89 329 329 HOH HOH . C 3 HOH A 90 330 330 HOH HOH . C 3 HOH A 91 331 331 HOH HOH . C 3 HOH A 92 332 332 HOH HOH . C 3 HOH A 93 333 333 HOH HOH . C 3 HOH A 94 334 334 HOH HOH . C 3 HOH A 95 335 335 HOH HOH . C 3 HOH A 96 336 336 HOH HOH . C 3 HOH A 97 337 337 HOH HOH . C 3 HOH A 98 338 338 HOH HOH . C 3 HOH A 99 339 339 HOH HOH . C 3 HOH A 100 340 340 HOH HOH . C 3 HOH A 101 341 341 HOH HOH . C 3 HOH A 102 342 342 HOH HOH . C 3 HOH A 103 343 343 HOH HOH . C 3 HOH A 104 344 344 HOH HOH . C 3 HOH A 105 345 345 HOH HOH . C 3 HOH A 106 346 346 HOH HOH . C 3 HOH A 107 347 347 HOH HOH . C 3 HOH A 108 348 348 HOH HOH . C 3 HOH A 109 349 349 HOH HOH . C 3 HOH A 110 350 350 HOH HOH . C 3 HOH A 111 351 351 HOH HOH . C 3 HOH A 112 352 352 HOH HOH . C 3 HOH A 113 353 353 HOH HOH . C 3 HOH A 114 354 354 HOH HOH . C 3 HOH A 115 355 355 HOH HOH . C 3 HOH A 116 356 356 HOH HOH . C 3 HOH A 117 357 357 HOH HOH . C 3 HOH A 118 358 358 HOH HOH . C 3 HOH A 119 359 359 HOH HOH . C 3 HOH A 120 360 360 HOH HOH . C 3 HOH A 121 361 361 HOH HOH . C 3 HOH A 122 362 362 HOH HOH . C 3 HOH A 123 363 363 HOH HOH . C 3 HOH A 124 364 364 HOH HOH . C 3 HOH A 125 365 365 HOH HOH . C 3 HOH A 126 366 366 HOH HOH . C 3 HOH A 127 367 367 HOH HOH . C 3 HOH A 128 368 368 HOH HOH . C 3 HOH A 129 369 369 HOH HOH . C 3 HOH A 130 370 370 HOH HOH . C 3 HOH A 131 371 371 HOH HOH . C 3 HOH A 132 372 372 HOH HOH . C 3 HOH A 133 373 373 HOH HOH . C 3 HOH A 134 374 374 HOH HOH . C 3 HOH A 135 375 375 HOH HOH . C 3 HOH A 136 376 376 HOH HOH . C 3 HOH A 137 377 377 HOH HOH . C 3 HOH A 138 378 378 HOH HOH . C 3 HOH A 139 379 379 HOH HOH . C 3 HOH A 140 380 380 HOH HOH . C 3 HOH A 141 381 381 HOH HOH . C 3 HOH A 142 382 382 HOH HOH . C 3 HOH A 143 383 383 HOH HOH . C 3 HOH A 144 384 384 HOH HOH . C 3 HOH A 145 385 385 HOH HOH . C 3 HOH A 146 386 386 HOH HOH . C 3 HOH A 147 387 387 HOH HOH . C 3 HOH A 148 388 388 HOH HOH . C 3 HOH A 149 389 389 HOH HOH . C 3 HOH A 150 390 390 HOH HOH . C 3 HOH A 151 391 391 HOH HOH . C 3 HOH A 152 392 392 HOH HOH . C 3 HOH A 153 393 393 HOH HOH . C 3 HOH A 154 394 394 HOH HOH . C 3 HOH A 155 395 395 HOH HOH . C 3 HOH A 156 396 396 HOH HOH . C 3 HOH A 157 397 397 HOH HOH . C 3 HOH A 158 398 398 HOH HOH . C 3 HOH A 159 399 399 HOH HOH . C 3 HOH A 160 400 400 HOH HOH . C 3 HOH A 161 401 401 HOH HOH . C 3 HOH A 162 402 402 HOH HOH . C 3 HOH A 163 403 403 HOH HOH . C 3 HOH A 164 404 404 HOH HOH . C 3 HOH A 165 405 405 HOH HOH . C 3 HOH A 166 406 406 HOH HOH . C 3 HOH A 167 407 407 HOH HOH . C 3 HOH A 168 408 408 HOH HOH . C 3 HOH A 169 409 409 HOH HOH . C 3 HOH A 170 410 410 HOH HOH . C 3 HOH A 171 411 411 HOH HOH . C 3 HOH A 172 412 412 HOH HOH . C 3 HOH A 173 413 413 HOH HOH . C 3 HOH A 174 414 414 HOH HOH . C 3 HOH A 175 415 415 HOH HOH . C 3 HOH A 176 416 416 HOH HOH . C 3 HOH A 177 417 417 HOH HOH . C 3 HOH A 178 418 418 HOH HOH . C 3 HOH A 179 419 419 HOH HOH . C 3 HOH A 180 420 420 HOH HOH . C 3 HOH A 181 421 421 HOH HOH . C 3 HOH A 182 422 422 HOH HOH . C 3 HOH A 183 423 423 HOH HOH . C 3 HOH A 184 424 424 HOH HOH . C 3 HOH A 185 425 425 HOH HOH . C 3 HOH A 186 426 426 HOH HOH . C 3 HOH A 187 427 427 HOH HOH . C 3 HOH A 188 428 428 HOH HOH . C 3 HOH A 189 429 429 HOH HOH . C 3 HOH A 190 430 430 HOH HOH . C 3 HOH A 191 431 431 HOH HOH . C 3 HOH A 192 432 432 HOH HOH . C 3 HOH A 193 433 433 HOH HOH . C 3 HOH A 194 434 434 HOH HOH . C 3 HOH A 195 435 435 HOH HOH . C 3 HOH A 196 436 436 HOH HOH . C 3 HOH A 197 437 437 HOH HOH . C 3 HOH A 198 438 438 HOH HOH . C 3 HOH A 199 439 439 HOH HOH . C 3 HOH A 200 440 440 HOH HOH . C 3 HOH A 201 441 441 HOH HOH . C 3 HOH A 202 442 442 HOH HOH . C 3 HOH A 203 443 443 HOH HOH . C 3 HOH A 204 444 444 HOH HOH . C 3 HOH A 205 445 445 HOH HOH . C 3 HOH A 206 446 446 HOH HOH . C 3 HOH A 207 447 447 HOH HOH . C 3 HOH A 208 448 448 HOH HOH . C 3 HOH A 209 449 449 HOH HOH . C 3 HOH A 210 450 450 HOH HOH . C 3 HOH A 211 451 451 HOH HOH . C 3 HOH A 212 452 452 HOH HOH . C 3 HOH A 213 453 453 HOH HOH . C 3 HOH A 214 454 454 HOH HOH . C 3 HOH A 215 455 455 HOH HOH . C 3 HOH A 216 456 456 HOH HOH . C 3 HOH A 217 457 457 HOH HOH . C 3 HOH A 218 458 458 HOH HOH . C 3 HOH A 219 459 459 HOH HOH . C 3 HOH A 220 460 460 HOH HOH . C 3 HOH A 221 461 461 HOH HOH . C 3 HOH A 222 462 462 HOH HOH . C 3 HOH A 223 463 463 HOH HOH . C 3 HOH A 224 464 464 HOH HOH . C 3 HOH A 225 465 465 HOH HOH . C 3 HOH A 226 466 466 HOH HOH . C 3 HOH A 227 467 239 HOH HOH . C 3 HOH A 228 468 240 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 40.854 _atom_site.Cartn_y 17.049 _atom_site.Cartn_z 24.153 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 240 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 103 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #