data_3BW2 # _model_server_result.job_id h835HrFKNAhTvbtvaNhBuw _model_server_result.datetime_utc '2025-03-26 19:08:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bw2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":371}' # _entry.id 3BW2 # _exptl.entry_id 3BW2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3BW2 _cell.length_a 113.133 _cell.length_b 113.133 _cell.length_c 115.739 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BW2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_574 x,-y+5/2,-z-3/4 1 0 0 0 -1 0 0 0 -1 0 282.8325 -86.80425 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 291 n n C1 H11 MPD sing 292 n n C1 H12 MPD sing 293 n n C1 H13 MPD sing 294 n n C2 O2 MPD sing 295 n n C2 CM MPD sing 296 n n C2 C3 MPD sing 297 n n O2 HO2 MPD sing 298 n n CM HM1 MPD sing 299 n n CM HM2 MPD sing 300 n n CM HM3 MPD sing 301 n n C3 C4 MPD sing 302 n n C3 H31 MPD sing 303 n n C3 H32 MPD sing 304 n n C4 O4 MPD sing 305 n n C4 C5 MPD sing 306 n n C4 H4 MPD sing 307 n n O4 HO4 MPD sing 308 n n C5 H51 MPD sing 309 n n C5 H52 MPD sing 310 n n C5 H53 MPD sing 311 n n # _atom_sites.entry_id 3BW2 _atom_sites.fract_transf_matrix[1][1] 0.008839 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008839 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 370 1 FMN FMN . C 3 MPD A 1 371 2 MPD MPD . D 4 HOH A 1 372 1 HOH HOH . D 4 HOH A 2 373 2 HOH HOH . D 4 HOH A 3 374 3 HOH HOH . D 4 HOH A 4 375 4 HOH HOH . D 4 HOH A 5 376 5 HOH HOH . D 4 HOH A 6 377 6 HOH HOH . D 4 HOH A 7 378 7 HOH HOH . D 4 HOH A 8 379 8 HOH HOH . D 4 HOH A 9 380 9 HOH HOH . D 4 HOH A 10 381 10 HOH HOH . D 4 HOH A 11 382 11 HOH HOH . D 4 HOH A 12 383 12 HOH HOH . D 4 HOH A 13 384 13 HOH HOH . D 4 HOH A 14 385 14 HOH HOH . D 4 HOH A 15 386 15 HOH HOH . D 4 HOH A 16 387 16 HOH HOH . D 4 HOH A 17 388 17 HOH HOH . D 4 HOH A 18 389 18 HOH HOH . D 4 HOH A 19 390 19 HOH HOH . D 4 HOH A 20 391 20 HOH HOH . D 4 HOH A 21 392 21 HOH HOH . D 4 HOH A 22 393 22 HOH HOH . D 4 HOH A 23 394 23 HOH HOH . D 4 HOH A 24 395 24 HOH HOH . D 4 HOH A 25 396 25 HOH HOH . D 4 HOH A 26 397 26 HOH HOH . D 4 HOH A 27 398 27 HOH HOH . D 4 HOH A 28 399 28 HOH HOH . D 4 HOH A 29 400 29 HOH HOH . D 4 HOH A 30 401 30 HOH HOH . D 4 HOH A 31 402 31 HOH HOH . D 4 HOH A 32 403 32 HOH HOH . D 4 HOH A 33 404 33 HOH HOH . D 4 HOH A 34 405 34 HOH HOH . D 4 HOH A 35 406 35 HOH HOH . D 4 HOH A 36 407 36 HOH HOH . D 4 HOH A 37 408 37 HOH HOH . D 4 HOH A 38 409 38 HOH HOH . D 4 HOH A 39 410 39 HOH HOH . D 4 HOH A 40 411 40 HOH HOH . D 4 HOH A 41 412 41 HOH HOH . D 4 HOH A 42 413 42 HOH HOH . D 4 HOH A 43 414 43 HOH HOH . D 4 HOH A 44 415 44 HOH HOH . D 4 HOH A 45 416 45 HOH HOH . D 4 HOH A 46 417 46 HOH HOH . D 4 HOH A 47 418 47 HOH HOH . D 4 HOH A 48 419 48 HOH HOH . D 4 HOH A 49 420 49 HOH HOH . D 4 HOH A 50 421 50 HOH HOH . D 4 HOH A 51 422 51 HOH HOH . D 4 HOH A 52 423 52 HOH HOH . D 4 HOH A 53 424 53 HOH HOH . D 4 HOH A 54 425 54 HOH HOH . D 4 HOH A 55 426 56 HOH HOH . D 4 HOH A 56 427 57 HOH HOH . D 4 HOH A 57 428 58 HOH HOH . D 4 HOH A 58 429 59 HOH HOH . D 4 HOH A 59 430 60 HOH HOH . D 4 HOH A 60 431 61 HOH HOH . D 4 HOH A 61 432 62 HOH HOH . D 4 HOH A 62 433 63 HOH HOH . D 4 HOH A 63 434 64 HOH HOH . D 4 HOH A 64 435 65 HOH HOH . D 4 HOH A 65 436 66 HOH HOH . D 4 HOH A 66 437 67 HOH HOH . D 4 HOH A 67 438 68 HOH HOH . D 4 HOH A 68 439 69 HOH HOH . D 4 HOH A 69 440 70 HOH HOH . D 4 HOH A 70 441 71 HOH HOH . D 4 HOH A 71 442 72 HOH HOH . D 4 HOH A 72 443 73 HOH HOH . D 4 HOH A 73 444 74 HOH HOH . D 4 HOH A 74 445 75 HOH HOH . D 4 HOH A 75 446 76 HOH HOH . D 4 HOH A 76 447 77 HOH HOH . D 4 HOH A 77 448 78 HOH HOH . D 4 HOH A 78 449 79 HOH HOH . D 4 HOH A 79 450 80 HOH HOH . D 4 HOH A 80 451 81 HOH HOH . D 4 HOH A 81 452 82 HOH HOH . D 4 HOH A 82 453 83 HOH HOH . D 4 HOH A 83 454 84 HOH HOH . D 4 HOH A 84 455 85 HOH HOH . D 4 HOH A 85 456 86 HOH HOH . D 4 HOH A 86 457 87 HOH HOH . D 4 HOH A 87 458 88 HOH HOH . D 4 HOH A 88 459 89 HOH HOH . D 4 HOH A 89 460 90 HOH HOH . D 4 HOH A 90 461 91 HOH HOH . D 4 HOH A 91 462 92 HOH HOH . D 4 HOH A 92 463 93 HOH HOH . D 4 HOH A 93 464 94 HOH HOH . D 4 HOH A 94 465 95 HOH HOH . D 4 HOH A 95 466 96 HOH HOH . D 4 HOH A 96 467 97 HOH HOH . D 4 HOH A 97 468 98 HOH HOH . D 4 HOH A 98 469 99 HOH HOH . D 4 HOH A 99 470 100 HOH HOH . D 4 HOH A 100 471 101 HOH HOH . D 4 HOH A 101 472 102 HOH HOH . D 4 HOH A 102 473 103 HOH HOH . D 4 HOH A 103 474 104 HOH HOH . D 4 HOH A 104 475 105 HOH HOH . D 4 HOH A 105 476 106 HOH HOH . D 4 HOH A 106 477 107 HOH HOH . D 4 HOH A 107 478 108 HOH HOH . D 4 HOH A 108 479 109 HOH HOH . D 4 HOH A 109 480 110 HOH HOH . D 4 HOH A 110 481 111 HOH HOH . D 4 HOH A 111 482 112 HOH HOH . D 4 HOH A 112 483 113 HOH HOH . D 4 HOH A 113 484 114 HOH HOH . D 4 HOH A 114 485 115 HOH HOH . D 4 HOH A 115 486 116 HOH HOH . D 4 HOH A 116 487 117 HOH HOH . D 4 HOH A 117 488 118 HOH HOH . D 4 HOH A 118 489 119 HOH HOH . D 4 HOH A 119 490 120 HOH HOH . D 4 HOH A 120 491 121 HOH HOH . D 4 HOH A 121 492 122 HOH HOH . D 4 HOH A 122 493 123 HOH HOH . D 4 HOH A 123 494 124 HOH HOH . D 4 HOH A 124 495 125 HOH HOH . D 4 HOH A 125 496 126 HOH HOH . D 4 HOH A 126 497 127 HOH HOH . D 4 HOH A 127 498 128 HOH HOH . D 4 HOH A 128 499 129 HOH HOH . D 4 HOH A 129 500 130 HOH HOH . D 4 HOH A 130 501 131 HOH HOH . D 4 HOH A 131 502 132 HOH HOH . D 4 HOH A 132 503 133 HOH HOH . D 4 HOH A 133 504 134 HOH HOH . D 4 HOH A 134 505 135 HOH HOH . D 4 HOH A 135 506 136 HOH HOH . D 4 HOH A 136 507 137 HOH HOH . D 4 HOH A 137 508 138 HOH HOH . D 4 HOH A 138 509 139 HOH HOH . D 4 HOH A 139 510 140 HOH HOH . D 4 HOH A 140 511 141 HOH HOH . D 4 HOH A 141 512 142 HOH HOH . D 4 HOH A 142 513 143 HOH HOH . D 4 HOH A 143 514 144 HOH HOH . D 4 HOH A 144 515 145 HOH HOH . D 4 HOH A 145 516 146 HOH HOH . D 4 HOH A 146 517 147 HOH HOH . D 4 HOH A 147 518 148 HOH HOH . D 4 HOH A 148 519 149 HOH HOH . D 4 HOH A 149 520 150 HOH HOH . D 4 HOH A 150 521 151 HOH HOH . D 4 HOH A 151 522 152 HOH HOH . D 4 HOH A 152 523 153 HOH HOH . D 4 HOH A 153 524 154 HOH HOH . D 4 HOH A 154 525 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . C 3 62.943 143.589 -79.565 1 61.64 ? C1 MPD 371 A 1 HETATM 2 C C2 MPD . . . C 3 63.224 143.663 -78.053 1 61.66 ? C2 MPD 371 A 1 HETATM 3 O O2 MPD . . . C 3 62.501 142.62 -77.377 1 61.93 ? O2 MPD 371 A 1 HETATM 4 C CM MPD . . . C 3 64.73 143.484 -77.81 1 62.19 ? CM MPD 371 A 1 HETATM 5 C C3 MPD . . . C 3 62.811 145.051 -77.498 1 62.4 ? C3 MPD 371 A 1 HETATM 6 C C4 MPD . . . C 3 61.306 145.375 -77.691 1 62.25 ? C4 MPD 371 A 1 HETATM 7 O O4 MPD . . . C 3 60.5 144.395 -77.056 1 63.99 ? O4 MPD 371 A 1 HETATM 8 C C5 MPD . . . C 3 60.968 146.763 -77.124 1 61.57 ? C5 MPD 371 A 1 # _model_server_stats.io_time_ms 84 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 8 #