data_3BXQ # _model_server_result.job_id psOP59dqc4fZfUYDUONn1g _model_server_result.datetime_utc '2025-02-05 12:47:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3bxq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":102}' # _entry.id 3BXQ # _exptl.entry_id 3BXQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BXQ _cell.length_a 81.39 _cell.length_b 81.39 _cell.length_c 34 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BXQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc2 E ZN ZN . B ZN 101 1_555 H O HOH . B HOH 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc3 D NE2 HIS 10 D HIS 10 1_555 F ZN ZN . D ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3BXQ _atom_sites.fract_transf_matrix[1][1] 0.012287 _atom_sites.fract_transf_matrix[1][2] 0.007094 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029412 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN B 1 101 101 ZN ZN . F 3 ZN D 1 102 102 ZN ZN . G 4 HOH A 1 22 5 HOH HOH . G 4 HOH A 2 23 6 HOH HOH . G 4 HOH A 3 24 8 HOH HOH . G 4 HOH A 4 25 12 HOH HOH . G 4 HOH A 5 26 16 HOH HOH . G 4 HOH A 6 27 24 HOH HOH . G 4 HOH A 7 28 26 HOH HOH . G 4 HOH A 8 29 28 HOH HOH . G 4 HOH A 9 30 30 HOH HOH . G 4 HOH A 10 31 37 HOH HOH . G 4 HOH A 11 32 43 HOH HOH . G 4 HOH A 12 33 46 HOH HOH . G 4 HOH A 13 34 55 HOH HOH . G 4 HOH A 14 35 57 HOH HOH . G 4 HOH A 15 36 60 HOH HOH . G 4 HOH A 16 37 62 HOH HOH . G 4 HOH A 17 38 63 HOH HOH . G 4 HOH A 18 39 64 HOH HOH . G 4 HOH A 19 40 75 HOH HOH . G 4 HOH A 20 41 87 HOH HOH . G 4 HOH A 21 42 90 HOH HOH . G 4 HOH A 22 43 91 HOH HOH . G 4 HOH A 23 44 98 HOH HOH . G 4 HOH A 24 45 100 HOH HOH . G 4 HOH A 25 46 101 HOH HOH . G 4 HOH A 26 47 102 HOH HOH . G 4 HOH A 27 48 104 HOH HOH . G 4 HOH A 28 49 116 HOH HOH . G 4 HOH A 29 50 117 HOH HOH . G 4 HOH A 30 51 120 HOH HOH . H 4 HOH B 1 102 1 HOH HOH . H 4 HOH B 2 103 3 HOH HOH . H 4 HOH B 3 104 4 HOH HOH . H 4 HOH B 4 105 9 HOH HOH . H 4 HOH B 5 106 10 HOH HOH . H 4 HOH B 6 107 13 HOH HOH . H 4 HOH B 7 108 14 HOH HOH . H 4 HOH B 8 109 18 HOH HOH . H 4 HOH B 9 110 20 HOH HOH . H 4 HOH B 10 111 22 HOH HOH . H 4 HOH B 11 112 33 HOH HOH . H 4 HOH B 12 113 34 HOH HOH . H 4 HOH B 13 114 36 HOH HOH . H 4 HOH B 14 115 38 HOH HOH . H 4 HOH B 15 116 42 HOH HOH . H 4 HOH B 16 117 54 HOH HOH . H 4 HOH B 17 118 56 HOH HOH . H 4 HOH B 18 119 67 HOH HOH . H 4 HOH B 19 120 71 HOH HOH . H 4 HOH B 20 121 72 HOH HOH . H 4 HOH B 21 122 73 HOH HOH . H 4 HOH B 22 123 74 HOH HOH . H 4 HOH B 23 124 76 HOH HOH . H 4 HOH B 24 125 77 HOH HOH . H 4 HOH B 25 126 81 HOH HOH . H 4 HOH B 26 127 82 HOH HOH . H 4 HOH B 27 128 83 HOH HOH . H 4 HOH B 28 129 86 HOH HOH . H 4 HOH B 29 130 89 HOH HOH . H 4 HOH B 30 131 93 HOH HOH . H 4 HOH B 31 132 95 HOH HOH . H 4 HOH B 32 133 106 HOH HOH . H 4 HOH B 33 134 110 HOH HOH . H 4 HOH B 34 135 111 HOH HOH . H 4 HOH B 35 136 112 HOH HOH . H 4 HOH B 36 137 113 HOH HOH . H 4 HOH B 37 138 114 HOH HOH . H 4 HOH B 38 139 118 HOH HOH . H 4 HOH B 39 140 119 HOH HOH . H 4 HOH B 40 141 121 HOH HOH . H 4 HOH B 41 142 125 HOH HOH . H 4 HOH B 42 143 126 HOH HOH . H 4 HOH B 43 144 127 HOH HOH . I 4 HOH C 1 22 11 HOH HOH . I 4 HOH C 2 23 15 HOH HOH . I 4 HOH C 3 24 29 HOH HOH . I 4 HOH C 4 25 35 HOH HOH . I 4 HOH C 5 26 39 HOH HOH . I 4 HOH C 6 27 45 HOH HOH . I 4 HOH C 7 28 49 HOH HOH . I 4 HOH C 8 29 50 HOH HOH . I 4 HOH C 9 30 52 HOH HOH . I 4 HOH C 10 31 61 HOH HOH . I 4 HOH C 11 32 65 HOH HOH . I 4 HOH C 12 33 69 HOH HOH . I 4 HOH C 13 34 70 HOH HOH . I 4 HOH C 14 35 79 HOH HOH . I 4 HOH C 15 36 80 HOH HOH . I 4 HOH C 16 37 85 HOH HOH . I 4 HOH C 17 38 88 HOH HOH . I 4 HOH C 18 39 92 HOH HOH . I 4 HOH C 19 40 94 HOH HOH . I 4 HOH C 20 41 97 HOH HOH . I 4 HOH C 21 42 99 HOH HOH . I 4 HOH C 22 43 105 HOH HOH . I 4 HOH C 23 44 107 HOH HOH . J 4 HOH D 1 103 2 HOH HOH . J 4 HOH D 2 104 7 HOH HOH . J 4 HOH D 3 105 17 HOH HOH . J 4 HOH D 4 106 19 HOH HOH . J 4 HOH D 5 107 21 HOH HOH . J 4 HOH D 6 108 23 HOH HOH . J 4 HOH D 7 109 25 HOH HOH . J 4 HOH D 8 110 27 HOH HOH . J 4 HOH D 9 111 31 HOH HOH . J 4 HOH D 10 112 32 HOH HOH . J 4 HOH D 11 113 40 HOH HOH . J 4 HOH D 12 114 41 HOH HOH . J 4 HOH D 13 115 44 HOH HOH . J 4 HOH D 14 116 47 HOH HOH . J 4 HOH D 15 117 48 HOH HOH . J 4 HOH D 16 118 51 HOH HOH . J 4 HOH D 17 119 53 HOH HOH . J 4 HOH D 18 120 58 HOH HOH . J 4 HOH D 19 121 59 HOH HOH . J 4 HOH D 20 122 66 HOH HOH . J 4 HOH D 21 123 68 HOH HOH . J 4 HOH D 22 124 78 HOH HOH . J 4 HOH D 23 125 84 HOH HOH . J 4 HOH D 24 126 96 HOH HOH . J 4 HOH D 25 127 103 HOH HOH . J 4 HOH D 26 128 108 HOH HOH . J 4 HOH D 27 129 109 HOH HOH . J 4 HOH D 28 130 115 HOH HOH . J 4 HOH D 29 131 122 HOH HOH . J 4 HOH D 30 132 123 HOH HOH . J 4 HOH D 31 133 124 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z -6.05 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 2.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 102 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 93 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #