data_3BYP # _model_server_result.job_id eHVPxfQqkgwNX8TW9ZaWHw _model_server_result.datetime_utc '2024-12-13 02:03:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3byp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":95}' # _entry.id 3BYP # _exptl.entry_id 3BYP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3BYP _cell.length_a 60.331 _cell.length_b 60.331 _cell.length_c 92.137 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3BYP _symmetry.cell_setting ? _symmetry.Int_Tables_number 153 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 1 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3BYP _atom_sites.fract_transf_matrix[1][1] 0.016575 _atom_sites.fract_transf_matrix[1][2] 0.00957 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 95 95 SO4 SO4 . D 2 SO4 B 1 95 95 SO4 SO4 . E 2 SO4 B 1 96 96 SO4 SO4 . F 3 HOH A 1 96 96 HOH HOH . F 3 HOH A 2 97 97 HOH HOH . F 3 HOH A 3 98 98 HOH HOH . F 3 HOH A 4 99 99 HOH HOH . F 3 HOH A 5 100 100 HOH HOH . F 3 HOH A 6 101 101 HOH HOH . F 3 HOH A 7 102 102 HOH HOH . F 3 HOH A 8 103 103 HOH HOH . F 3 HOH A 9 104 104 HOH HOH . F 3 HOH A 10 105 105 HOH HOH . F 3 HOH A 11 106 106 HOH HOH . F 3 HOH A 12 107 107 HOH HOH . F 3 HOH A 13 108 108 HOH HOH . F 3 HOH A 14 109 109 HOH HOH . F 3 HOH A 15 110 110 HOH HOH . F 3 HOH A 16 111 111 HOH HOH . F 3 HOH A 17 112 112 HOH HOH . F 3 HOH A 18 113 113 HOH HOH . F 3 HOH A 19 114 114 HOH HOH . F 3 HOH A 20 116 116 HOH HOH . F 3 HOH A 21 117 117 HOH HOH . F 3 HOH A 22 118 118 HOH HOH . F 3 HOH A 23 119 119 HOH HOH . F 3 HOH A 24 120 120 HOH HOH . F 3 HOH A 25 121 121 HOH HOH . F 3 HOH A 26 122 122 HOH HOH . F 3 HOH A 27 123 123 HOH HOH . F 3 HOH A 28 124 124 HOH HOH . F 3 HOH A 29 125 125 HOH HOH . F 3 HOH A 30 126 126 HOH HOH . F 3 HOH A 31 127 127 HOH HOH . F 3 HOH A 32 128 128 HOH HOH . F 3 HOH A 33 129 129 HOH HOH . F 3 HOH A 34 130 130 HOH HOH . F 3 HOH A 35 131 131 HOH HOH . F 3 HOH A 36 132 132 HOH HOH . F 3 HOH A 37 133 133 HOH HOH . F 3 HOH A 38 134 134 HOH HOH . F 3 HOH A 39 135 135 HOH HOH . F 3 HOH A 40 136 136 HOH HOH . F 3 HOH A 41 137 137 HOH HOH . F 3 HOH A 42 138 138 HOH HOH . F 3 HOH A 43 139 139 HOH HOH . F 3 HOH A 44 140 140 HOH HOH . F 3 HOH A 45 141 141 HOH HOH . F 3 HOH A 46 142 142 HOH HOH . F 3 HOH A 47 143 143 HOH HOH . F 3 HOH A 48 144 144 HOH HOH . F 3 HOH A 49 145 145 HOH HOH . F 3 HOH A 50 146 146 HOH HOH . F 3 HOH A 51 147 147 HOH HOH . F 3 HOH A 52 148 148 HOH HOH . F 3 HOH A 53 149 149 HOH HOH . F 3 HOH A 54 150 150 HOH HOH . F 3 HOH A 55 152 152 HOH HOH . F 3 HOH A 56 153 153 HOH HOH . F 3 HOH A 57 154 154 HOH HOH . F 3 HOH A 58 155 155 HOH HOH . F 3 HOH A 59 156 156 HOH HOH . F 3 HOH A 60 157 157 HOH HOH . F 3 HOH A 61 158 158 HOH HOH . F 3 HOH A 62 159 159 HOH HOH . F 3 HOH A 63 160 160 HOH HOH . F 3 HOH A 64 161 161 HOH HOH . F 3 HOH A 65 162 162 HOH HOH . F 3 HOH A 66 163 163 HOH HOH . F 3 HOH A 67 164 164 HOH HOH . F 3 HOH A 68 165 165 HOH HOH . F 3 HOH A 69 166 166 HOH HOH . F 3 HOH A 70 167 167 HOH HOH . F 3 HOH A 71 168 168 HOH HOH . F 3 HOH A 72 169 169 HOH HOH . F 3 HOH A 73 170 170 HOH HOH . F 3 HOH A 74 171 171 HOH HOH . F 3 HOH A 75 172 172 HOH HOH . F 3 HOH A 76 173 173 HOH HOH . F 3 HOH A 77 174 174 HOH HOH . F 3 HOH A 78 175 175 HOH HOH . F 3 HOH A 79 176 176 HOH HOH . F 3 HOH A 80 177 177 HOH HOH . F 3 HOH A 81 178 178 HOH HOH . F 3 HOH A 82 179 179 HOH HOH . F 3 HOH A 83 180 180 HOH HOH . F 3 HOH A 84 181 181 HOH HOH . F 3 HOH A 85 182 182 HOH HOH . F 3 HOH A 86 183 183 HOH HOH . F 3 HOH A 87 184 184 HOH HOH . F 3 HOH A 88 185 185 HOH HOH . F 3 HOH A 89 186 186 HOH HOH . F 3 HOH A 90 187 187 HOH HOH . F 3 HOH A 91 188 188 HOH HOH . F 3 HOH A 92 189 189 HOH HOH . F 3 HOH A 93 190 190 HOH HOH . F 3 HOH A 94 191 191 HOH HOH . F 3 HOH A 95 192 192 HOH HOH . F 3 HOH A 96 193 193 HOH HOH . F 3 HOH A 97 194 194 HOH HOH . F 3 HOH A 98 195 195 HOH HOH . F 3 HOH A 99 196 196 HOH HOH . F 3 HOH A 100 197 197 HOH HOH . F 3 HOH A 101 198 198 HOH HOH . F 3 HOH A 102 199 199 HOH HOH . F 3 HOH A 103 200 200 HOH HOH . F 3 HOH A 104 201 201 HOH HOH . F 3 HOH A 105 202 202 HOH HOH . F 3 HOH A 106 203 203 HOH HOH . F 3 HOH A 107 204 204 HOH HOH . F 3 HOH A 108 205 205 HOH HOH . F 3 HOH A 109 206 206 HOH HOH . F 3 HOH A 110 207 207 HOH HOH . F 3 HOH A 111 208 208 HOH HOH . F 3 HOH A 112 209 209 HOH HOH . F 3 HOH A 113 210 210 HOH HOH . F 3 HOH A 114 211 211 HOH HOH . F 3 HOH A 115 212 212 HOH HOH . F 3 HOH A 116 213 213 HOH HOH . F 3 HOH A 117 214 214 HOH HOH . F 3 HOH A 118 215 215 HOH HOH . F 3 HOH A 119 216 216 HOH HOH . F 3 HOH A 120 217 217 HOH HOH . F 3 HOH A 121 218 218 HOH HOH . F 3 HOH A 122 219 219 HOH HOH . F 3 HOH A 123 220 220 HOH HOH . F 3 HOH A 124 221 221 HOH HOH . F 3 HOH A 125 222 222 HOH HOH . F 3 HOH A 126 223 223 HOH HOH . F 3 HOH A 127 224 224 HOH HOH . F 3 HOH A 128 225 225 HOH HOH . F 3 HOH A 129 226 226 HOH HOH . F 3 HOH A 130 227 227 HOH HOH . F 3 HOH A 131 228 228 HOH HOH . F 3 HOH A 132 229 229 HOH HOH . F 3 HOH A 133 230 230 HOH HOH . F 3 HOH A 134 231 231 HOH HOH . F 3 HOH A 135 233 233 HOH HOH . F 3 HOH A 136 234 234 HOH HOH . F 3 HOH A 137 235 235 HOH HOH . F 3 HOH A 138 236 236 HOH HOH . F 3 HOH A 139 238 238 HOH HOH . F 3 HOH A 140 239 239 HOH HOH . F 3 HOH A 141 240 240 HOH HOH . F 3 HOH A 142 241 241 HOH HOH . F 3 HOH A 143 242 242 HOH HOH . F 3 HOH A 144 243 243 HOH HOH . F 3 HOH A 145 244 244 HOH HOH . F 3 HOH A 146 245 245 HOH HOH . F 3 HOH A 147 246 246 HOH HOH . F 3 HOH A 148 247 247 HOH HOH . F 3 HOH A 149 248 248 HOH HOH . F 3 HOH A 150 249 249 HOH HOH . F 3 HOH A 151 250 250 HOH HOH . F 3 HOH A 152 251 251 HOH HOH . G 3 HOH B 1 115 115 HOH HOH . G 3 HOH B 2 116 116 HOH HOH . G 3 HOH B 3 117 117 HOH HOH . G 3 HOH B 4 118 118 HOH HOH . G 3 HOH B 5 119 119 HOH HOH . G 3 HOH B 6 120 120 HOH HOH . G 3 HOH B 7 121 121 HOH HOH . G 3 HOH B 8 122 122 HOH HOH . G 3 HOH B 9 123 123 HOH HOH . G 3 HOH B 10 124 124 HOH HOH . G 3 HOH B 11 125 125 HOH HOH . G 3 HOH B 12 126 126 HOH HOH . G 3 HOH B 13 127 127 HOH HOH . G 3 HOH B 14 128 128 HOH HOH . G 3 HOH B 15 129 129 HOH HOH . G 3 HOH B 16 130 130 HOH HOH . G 3 HOH B 17 131 131 HOH HOH . G 3 HOH B 18 132 132 HOH HOH . G 3 HOH B 19 133 133 HOH HOH . G 3 HOH B 20 134 134 HOH HOH . G 3 HOH B 21 135 135 HOH HOH . G 3 HOH B 22 136 136 HOH HOH . G 3 HOH B 23 137 137 HOH HOH . G 3 HOH B 24 138 138 HOH HOH . G 3 HOH B 25 139 139 HOH HOH . G 3 HOH B 26 140 140 HOH HOH . G 3 HOH B 27 141 141 HOH HOH . G 3 HOH B 28 142 142 HOH HOH . G 3 HOH B 29 143 143 HOH HOH . G 3 HOH B 30 144 144 HOH HOH . G 3 HOH B 31 145 145 HOH HOH . G 3 HOH B 32 146 146 HOH HOH . G 3 HOH B 33 147 147 HOH HOH . G 3 HOH B 34 148 148 HOH HOH . G 3 HOH B 35 149 149 HOH HOH . G 3 HOH B 36 150 150 HOH HOH . G 3 HOH B 37 151 151 HOH HOH . G 3 HOH B 38 152 152 HOH HOH . G 3 HOH B 39 153 153 HOH HOH . G 3 HOH B 40 154 154 HOH HOH . G 3 HOH B 41 155 155 HOH HOH . G 3 HOH B 42 156 156 HOH HOH . G 3 HOH B 43 157 157 HOH HOH . G 3 HOH B 44 158 158 HOH HOH . G 3 HOH B 45 159 159 HOH HOH . G 3 HOH B 46 160 160 HOH HOH . G 3 HOH B 47 161 161 HOH HOH . G 3 HOH B 48 162 162 HOH HOH . G 3 HOH B 49 163 163 HOH HOH . G 3 HOH B 50 164 164 HOH HOH . G 3 HOH B 51 165 165 HOH HOH . G 3 HOH B 52 166 166 HOH HOH . G 3 HOH B 53 167 167 HOH HOH . G 3 HOH B 54 168 168 HOH HOH . G 3 HOH B 55 169 169 HOH HOH . G 3 HOH B 56 170 170 HOH HOH . G 3 HOH B 57 171 171 HOH HOH . G 3 HOH B 58 172 172 HOH HOH . G 3 HOH B 59 173 173 HOH HOH . G 3 HOH B 60 174 174 HOH HOH . G 3 HOH B 61 175 175 HOH HOH . G 3 HOH B 62 176 176 HOH HOH . G 3 HOH B 63 177 177 HOH HOH . G 3 HOH B 64 178 178 HOH HOH . G 3 HOH B 65 179 179 HOH HOH . G 3 HOH B 66 180 180 HOH HOH . G 3 HOH B 67 181 181 HOH HOH . G 3 HOH B 68 182 182 HOH HOH . G 3 HOH B 69 183 183 HOH HOH . G 3 HOH B 70 184 184 HOH HOH . G 3 HOH B 71 185 185 HOH HOH . G 3 HOH B 72 186 186 HOH HOH . G 3 HOH B 73 187 187 HOH HOH . G 3 HOH B 74 188 188 HOH HOH . G 3 HOH B 75 189 189 HOH HOH . G 3 HOH B 76 190 190 HOH HOH . G 3 HOH B 77 191 191 HOH HOH . G 3 HOH B 78 192 192 HOH HOH . G 3 HOH B 79 193 193 HOH HOH . G 3 HOH B 80 194 194 HOH HOH . G 3 HOH B 81 195 195 HOH HOH . G 3 HOH B 82 196 196 HOH HOH . G 3 HOH B 83 197 197 HOH HOH . G 3 HOH B 84 198 198 HOH HOH . G 3 HOH B 85 199 199 HOH HOH . G 3 HOH B 86 200 200 HOH HOH . G 3 HOH B 87 201 201 HOH HOH . G 3 HOH B 88 202 202 HOH HOH . G 3 HOH B 89 203 203 HOH HOH . G 3 HOH B 90 204 204 HOH HOH . G 3 HOH B 91 205 205 HOH HOH . G 3 HOH B 92 206 206 HOH HOH . G 3 HOH B 93 207 207 HOH HOH . G 3 HOH B 94 208 208 HOH HOH . G 3 HOH B 95 209 209 HOH HOH . G 3 HOH B 96 210 210 HOH HOH . G 3 HOH B 97 211 211 HOH HOH . G 3 HOH B 98 212 212 HOH HOH . G 3 HOH B 99 213 213 HOH HOH . G 3 HOH B 100 214 214 HOH HOH . G 3 HOH B 101 215 215 HOH HOH . G 3 HOH B 102 216 216 HOH HOH . G 3 HOH B 103 217 217 HOH HOH . G 3 HOH B 104 218 218 HOH HOH . G 3 HOH B 105 219 219 HOH HOH . G 3 HOH B 106 220 220 HOH HOH . G 3 HOH B 107 221 221 HOH HOH . G 3 HOH B 108 222 222 HOH HOH . G 3 HOH B 109 223 223 HOH HOH . G 3 HOH B 110 224 224 HOH HOH . G 3 HOH B 111 225 225 HOH HOH . G 3 HOH B 112 226 226 HOH HOH . G 3 HOH B 113 227 227 HOH HOH . G 3 HOH B 114 228 228 HOH HOH . G 3 HOH B 115 229 229 HOH HOH . G 3 HOH B 116 230 230 HOH HOH . G 3 HOH B 117 231 231 HOH HOH . G 3 HOH B 118 232 232 HOH HOH . G 3 HOH B 119 233 233 HOH HOH . G 3 HOH B 120 234 234 HOH HOH . G 3 HOH B 121 235 235 HOH HOH . G 3 HOH B 122 236 236 HOH HOH . G 3 HOH B 123 237 237 HOH HOH . G 3 HOH B 124 238 238 HOH HOH . G 3 HOH B 125 239 239 HOH HOH . G 3 HOH B 126 240 240 HOH HOH . G 3 HOH B 127 241 241 HOH HOH . G 3 HOH B 128 242 242 HOH HOH . G 3 HOH B 129 243 243 HOH HOH . G 3 HOH B 130 244 244 HOH HOH . G 3 HOH B 131 245 245 HOH HOH . G 3 HOH B 132 246 246 HOH HOH . G 3 HOH B 133 247 247 HOH HOH . G 3 HOH B 134 248 248 HOH HOH . G 3 HOH B 135 249 249 HOH HOH . G 3 HOH B 136 250 250 HOH HOH . G 3 HOH B 137 251 251 HOH HOH . G 3 HOH B 138 252 252 HOH HOH . G 3 HOH B 139 253 253 HOH HOH . G 3 HOH B 140 254 254 HOH HOH . G 3 HOH B 141 255 255 HOH HOH . G 3 HOH B 142 256 256 HOH HOH . G 3 HOH B 143 257 257 HOH HOH . G 3 HOH B 144 258 258 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 -21.505 47.602 16.036 0.5 32.97 ? S SO4 95 B 1 HETATM 2 O O1 SO4 . . . D 2 -21.585 48.449 14.858 0.5 33.26 ? O1 SO4 95 B 1 HETATM 3 O O2 SO4 . . . D 2 -21.082 48.38 17.197 0.5 31.89 ? O2 SO4 95 B 1 HETATM 4 O O3 SO4 . . . D 2 -22.837 47.069 16.269 0.5 33.03 ? O3 SO4 95 B 1 HETATM 5 O O4 SO4 . . . D 2 -20.555 46.527 15.797 0.5 32.59 ? O4 SO4 95 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #