data_3BYV
#
_model_server_result.job_id            v4yO8f2xPChb7D3n5AYO8g 
_model_server_result.datetime_utc      '2025-02-28 22:51:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3byv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    3BYV 
#
_exptl.entry_id    3BYV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BYV 
_cell.length_a            59.072 
_cell.length_b            69.821 
_cell.length_c            85.418 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BYV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 308 A CYS 499 1_555 A SG CYS 329 A CYS 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? 
metalc ? metalc1 A OE2 GLU 251 A GLU 442 1_555 B MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc2 B MG MG . A MG 601 1_555 F O HOH . A HOH 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc3 B MG MG . A MG 601 1_555 F O HOH . A HOH 793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc4 B MG MG . A MG 601 1_555 F O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc5 B MG MG . A MG 601 1_555 F O HOH . A HOH 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc6 B MG MG . A MG 601 1_555 F O HOH . A HOH 859 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3BYV 
_atom_sites.fract_transf_matrix[1][1]    0.016928 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014322 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011707 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 601 1 MG MG . 
C 3 EDO A 1 602 1 EDO EDO . 
D 3 EDO A 1 603 1 EDO EDO . 
E 3 EDO A 1 604 1 EDO EDO . 
F 4 HOH A 1 701 1 HOH HOH . 
F 4 HOH A 2 702 5 HOH HOH . 
F 4 HOH A 3 703 6 HOH HOH . 
F 4 HOH A 4 704 8 HOH HOH . 
F 4 HOH A 5 705 9 HOH HOH . 
F 4 HOH A 6 706 10 HOH HOH . 
F 4 HOH A 7 707 11 HOH HOH . 
F 4 HOH A 8 708 12 HOH HOH . 
F 4 HOH A 9 709 13 HOH HOH . 
F 4 HOH A 10 710 15 HOH HOH . 
F 4 HOH A 11 711 16 HOH HOH . 
F 4 HOH A 12 712 19 HOH HOH . 
F 4 HOH A 13 713 22 HOH HOH . 
F 4 HOH A 14 714 23 HOH HOH . 
F 4 HOH A 15 715 25 HOH HOH . 
F 4 HOH A 16 716 28 HOH HOH . 
F 4 HOH A 17 717 30 HOH HOH . 
F 4 HOH A 18 718 31 HOH HOH . 
F 4 HOH A 19 719 35 HOH HOH . 
F 4 HOH A 20 720 36 HOH HOH . 
F 4 HOH A 21 721 39 HOH HOH . 
F 4 HOH A 22 722 41 HOH HOH . 
F 4 HOH A 23 723 42 HOH HOH . 
F 4 HOH A 24 724 43 HOH HOH . 
F 4 HOH A 25 725 44 HOH HOH . 
F 4 HOH A 26 726 45 HOH HOH . 
F 4 HOH A 27 727 46 HOH HOH . 
F 4 HOH A 28 728 47 HOH HOH . 
F 4 HOH A 29 729 48 HOH HOH . 
F 4 HOH A 30 730 51 HOH HOH . 
F 4 HOH A 31 731 52 HOH HOH . 
F 4 HOH A 32 732 53 HOH HOH . 
F 4 HOH A 33 733 54 HOH HOH . 
F 4 HOH A 34 734 57 HOH HOH . 
F 4 HOH A 35 735 59 HOH HOH . 
F 4 HOH A 36 736 61 HOH HOH . 
F 4 HOH A 37 737 62 HOH HOH . 
F 4 HOH A 38 738 64 HOH HOH . 
F 4 HOH A 39 739 67 HOH HOH . 
F 4 HOH A 40 740 68 HOH HOH . 
F 4 HOH A 41 741 69 HOH HOH . 
F 4 HOH A 42 742 73 HOH HOH . 
F 4 HOH A 43 743 75 HOH HOH . 
F 4 HOH A 44 744 76 HOH HOH . 
F 4 HOH A 45 745 77 HOH HOH . 
F 4 HOH A 46 746 78 HOH HOH . 
F 4 HOH A 47 747 80 HOH HOH . 
F 4 HOH A 48 748 82 HOH HOH . 
F 4 HOH A 49 749 83 HOH HOH . 
F 4 HOH A 50 750 85 HOH HOH . 
F 4 HOH A 51 751 89 HOH HOH . 
F 4 HOH A 52 752 92 HOH HOH . 
F 4 HOH A 53 753 94 HOH HOH . 
F 4 HOH A 54 754 97 HOH HOH . 
F 4 HOH A 55 755 98 HOH HOH . 
F 4 HOH A 56 756 101 HOH HOH . 
F 4 HOH A 57 757 106 HOH HOH . 
F 4 HOH A 58 758 108 HOH HOH . 
F 4 HOH A 59 759 115 HOH HOH . 
F 4 HOH A 60 760 121 HOH HOH . 
F 4 HOH A 61 761 122 HOH HOH . 
F 4 HOH A 62 762 130 HOH HOH . 
F 4 HOH A 63 763 132 HOH HOH . 
F 4 HOH A 64 764 133 HOH HOH . 
F 4 HOH A 65 765 138 HOH HOH . 
F 4 HOH A 66 766 139 HOH HOH . 
F 4 HOH A 67 767 141 HOH HOH . 
F 4 HOH A 68 768 142 HOH HOH . 
F 4 HOH A 69 769 146 HOH HOH . 
F 4 HOH A 70 770 148 HOH HOH . 
F 4 HOH A 71 771 150 HOH HOH . 
F 4 HOH A 72 772 151 HOH HOH . 
F 4 HOH A 73 773 152 HOH HOH . 
F 4 HOH A 74 774 155 HOH HOH . 
F 4 HOH A 75 775 156 HOH HOH . 
F 4 HOH A 76 776 157 HOH HOH . 
F 4 HOH A 77 777 158 HOH HOH . 
F 4 HOH A 78 778 159 HOH HOH . 
F 4 HOH A 79 779 165 HOH HOH . 
F 4 HOH A 80 780 168 HOH HOH . 
F 4 HOH A 81 781 172 HOH HOH . 
F 4 HOH A 82 782 181 HOH HOH . 
F 4 HOH A 83 783 184 HOH HOH . 
F 4 HOH A 84 784 186 HOH HOH . 
F 4 HOH A 85 785 192 HOH HOH . 
F 4 HOH A 86 786 194 HOH HOH . 
F 4 HOH A 87 787 195 HOH HOH . 
F 4 HOH A 88 788 198 HOH HOH . 
F 4 HOH A 89 789 199 HOH HOH . 
F 4 HOH A 90 790 206 HOH HOH . 
F 4 HOH A 91 791 208 HOH HOH . 
F 4 HOH A 92 792 210 HOH HOH . 
F 4 HOH A 93 793 213 HOH HOH . 
F 4 HOH A 94 794 215 HOH HOH . 
F 4 HOH A 95 795 223 HOH HOH . 
F 4 HOH A 96 796 226 HOH HOH . 
F 4 HOH A 97 797 229 HOH HOH . 
F 4 HOH A 98 798 231 HOH HOH . 
F 4 HOH A 99 799 232 HOH HOH . 
F 4 HOH A 100 800 236 HOH HOH . 
F 4 HOH A 101 801 237 HOH HOH . 
F 4 HOH A 102 802 238 HOH HOH . 
F 4 HOH A 103 803 239 HOH HOH . 
F 4 HOH A 104 804 240 HOH HOH . 
F 4 HOH A 105 805 241 HOH HOH . 
F 4 HOH A 106 806 242 HOH HOH . 
F 4 HOH A 107 807 243 HOH HOH . 
F 4 HOH A 108 808 244 HOH HOH . 
F 4 HOH A 109 809 245 HOH HOH . 
F 4 HOH A 110 810 246 HOH HOH . 
F 4 HOH A 111 811 247 HOH HOH . 
F 4 HOH A 112 812 248 HOH HOH . 
F 4 HOH A 113 813 249 HOH HOH . 
F 4 HOH A 114 814 250 HOH HOH . 
F 4 HOH A 115 815 1 HOH HOH . 
F 4 HOH A 116 816 2 HOH HOH . 
F 4 HOH A 117 817 3 HOH HOH . 
F 4 HOH A 118 818 4 HOH HOH . 
F 4 HOH A 119 819 5 HOH HOH . 
F 4 HOH A 120 820 6 HOH HOH . 
F 4 HOH A 121 821 7 HOH HOH . 
F 4 HOH A 122 822 8 HOH HOH . 
F 4 HOH A 123 823 10 HOH HOH . 
F 4 HOH A 124 824 11 HOH HOH . 
F 4 HOH A 125 825 12 HOH HOH . 
F 4 HOH A 126 826 13 HOH HOH . 
F 4 HOH A 127 827 15 HOH HOH . 
F 4 HOH A 128 828 16 HOH HOH . 
F 4 HOH A 129 829 18 HOH HOH . 
F 4 HOH A 130 830 19 HOH HOH . 
F 4 HOH A 131 831 20 HOH HOH . 
F 4 HOH A 132 832 21 HOH HOH . 
F 4 HOH A 133 833 22 HOH HOH . 
F 4 HOH A 134 834 24 HOH HOH . 
F 4 HOH A 135 835 25 HOH HOH . 
F 4 HOH A 136 836 26 HOH HOH . 
F 4 HOH A 137 837 27 HOH HOH . 
F 4 HOH A 138 838 29 HOH HOH . 
F 4 HOH A 139 839 30 HOH HOH . 
F 4 HOH A 140 840 31 HOH HOH . 
F 4 HOH A 141 841 32 HOH HOH . 
F 4 HOH A 142 842 33 HOH HOH . 
F 4 HOH A 143 843 34 HOH HOH . 
F 4 HOH A 144 844 35 HOH HOH . 
F 4 HOH A 145 845 37 HOH HOH . 
F 4 HOH A 146 846 38 HOH HOH . 
F 4 HOH A 147 847 39 HOH HOH . 
F 4 HOH A 148 848 42 HOH HOH . 
F 4 HOH A 149 849 43 HOH HOH . 
F 4 HOH A 150 850 44 HOH HOH . 
F 4 HOH A 151 851 45 HOH HOH . 
F 4 HOH A 152 852 46 HOH HOH . 
F 4 HOH A 153 853 48 HOH HOH . 
F 4 HOH A 154 854 49 HOH HOH . 
F 4 HOH A 155 855 52 HOH HOH . 
F 4 HOH A 156 856 54 HOH HOH . 
F 4 HOH A 157 857 55 HOH HOH . 
F 4 HOH A 158 858 56 HOH HOH . 
F 4 HOH A 159 859 57 HOH HOH . 
F 4 HOH A 160 860 58 HOH HOH . 
F 4 HOH A 161 861 59 HOH HOH . 
F 4 HOH A 162 862 64 HOH HOH . 
F 4 HOH A 163 863 65 HOH HOH . 
F 4 HOH A 164 864 67 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               57.592 
_atom_site.Cartn_y               42.998 
_atom_site.Cartn_z               8.01 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        8.91 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           601 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           1165 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#