data_3BYZ
#
_model_server_result.job_id            WTHqkaKBNpXiyNiqDGhwVQ 
_model_server_result.datetime_utc      '2024-10-14 14:17:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3byz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":603}' 
#
_entry.id    3BYZ 
#
_exptl.entry_id    3BYZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.445 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5S)-2-(cyclooctylamino)-5-methyl-5-propyl-1,3-thiazol-4(5H)-one 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3BYZ 
_cell.length_a            49.036 
_cell.length_b            138.48 
_cell.length_c            155.022 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3BYZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H 1 1 
C,D,I,J,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C15 H26 N2 O S' 
_chem_comp.formula_weight    282.445 
_chem_comp.id                H11 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5S)-2-(cyclooctylamino)-5-methyl-5-propyl-1,3-thiazol-4(5H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C4 N17 H11 sing 129 n n 
C4 S H11 sing 130 n n 
C4 N H11 doub 131 n n 
C5 C H11 sing 132 n n 
C5 C3 H11 sing 133 n n 
C6 C H11 sing 134 n n 
C7 C8 H11 sing 135 n n 
C7 C9 H11 sing 136 n n 
C7 N17 H11 sing 137 n n 
C8 C10 H11 sing 138 n n 
C10 C11 H11 sing 139 n n 
C13 C12 H11 sing 140 n n 
C13 C14 H11 sing 141 n n 
C15 C3 H11 sing 142 n n 
C11 C12 H11 sing 143 n n 
C14 C9 H11 sing 144 n n 
S C H11 sing 145 n n 
N C2 H11 sing 146 n n 
C2 O H11 doub 147 n n 
C2 C H11 sing 148 n n 
C5 H5 H11 sing 149 n n 
C5 H5A H11 sing 150 n n 
C6 H6 H11 sing 151 n n 
C6 H6A H11 sing 152 n n 
C6 H6B H11 sing 153 n n 
C7 H7 H11 sing 154 n n 
C8 H8 H11 sing 155 n n 
C8 H8A H11 sing 156 n n 
C10 H10 H11 sing 157 n n 
C10 H10A H11 sing 158 n n 
C13 H13 H11 sing 159 n n 
C13 H13A H11 sing 160 n n 
C15 H15 H11 sing 161 n n 
C15 H15A H11 sing 162 n n 
C15 H15B H11 sing 163 n n 
C11 H11 H11 sing 164 n n 
C11 H11A H11 sing 165 n n 
C12 H12 H11 sing 166 n n 
C12 H12A H11 sing 167 n n 
C14 H14 H11 sing 168 n n 
C14 H14A H11 sing 169 n n 
C9 H9 H11 sing 170 n n 
C9 H9A H11 sing 171 n n 
N17 HN17 H11 sing 172 n n 
C3 H3 H11 sing 173 n n 
C3 H3A H11 sing 174 n n 
#
_atom_sites.entry_id                     3BYZ 
_atom_sites.fract_transf_matrix[1][1]    0.020393 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007221 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006451 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NDP A 1 501 501 NDP NDP . 
F 3 H11 A 1 601 601 H11 LIG . 
G 2 NDP B 1 502 502 NDP NDP . 
H 3 H11 B 1 602 602 H11 LIG . 
I 2 NDP C 1 503 503 NDP NDP . 
J 3 H11 C 1 604 604 H11 LIG . 
K 2 NDP D 1 504 504 NDP NDP . 
L 3 H11 D 1 603 603 H11 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 H11 . . . L 3 23.357 1.35 101.267 1 31.34 ? C4 H11 603 D 1 
HETATM 2 C C5 H11 . . . L 3 23.468 -1.24 98.454 1 31.68 ? C5 H11 603 D 1 
HETATM 3 C C6 H11 . . . L 3 23.069 1.015 97.562 1 29.15 ? C6 H11 603 D 1 
HETATM 4 C C7 H11 . . . L 3 25.103 2.206 102.661 1 32.73 ? C7 H11 603 D 1 
HETATM 5 C C8 H11 . . . L 3 25.382 1.066 103.698 1 27.9 ? C8 H11 603 D 1 
HETATM 6 C C10 H11 . . . L 3 26.609 0.274 103.386 1 31.03 ? C10 H11 603 D 1 
HETATM 7 C C13 H11 . . . L 3 28.037 3.375 103.536 1 32.94 ? C13 H11 603 D 1 
HETATM 8 C C15 H11 . . . L 3 24.635 -3.459 99.061 1 32.83 ? C15 H11 603 D 1 
HETATM 9 C C11 H11 . . . L 3 27.832 0.885 104.1 1 31.51 ? C11 H11 603 D 1 
HETATM 10 C C12 H11 . . . L 3 28.49 1.925 103.226 1 29.82 ? C12 H11 603 D 1 
HETATM 11 C C14 H11 . . . L 3 26.674 3.483 104.242 1 32.95 ? C14 H11 603 D 1 
HETATM 12 C C9 H11 . . . L 3 25.487 3.575 103.259 1 32.66 ? C9 H11 603 D 1 
HETATM 13 N N17 H11 . . . L 3 23.659 1.967 102.382 1 32.64 ? N17 H11 603 D 1 
HETATM 14 S S H11 . . . L 3 24.495 0.942 100.043 1 32.49 ? S H11 603 D 1 
HETATM 15 N N H11 . . . L 3 22.131 1.015 100.96 1 31.96 ? N H11 603 D 1 
HETATM 16 C C2 H11 . . . L 3 21.959 0.389 99.773 1 32.71 ? C2 H11 603 D 1 
HETATM 17 O O H11 . . . L 3 20.822 0.054 99.415 1 32.8 ? O H11 603 D 1 
HETATM 18 C C H11 . . . L 3 23.236 0.214 98.884 1 32.4 ? C H11 603 D 1 
HETATM 19 C C3 H11 . . . L 3 23.929 -2.155 99.598 1 33.87 ? C3 H11 603 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           290 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           19 
#