data_3C02 # _model_server_result.job_id kfc7NKufBkw3iZev8D9icQ _model_server_result.datetime_utc '2025-08-31 06:31:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c02 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":475}' # _entry.id 3C02 # _exptl.entry_id 3C02 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3C02 _cell.length_a 92.43 _cell.length_b 92.43 _cell.length_c 193.168 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C02 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 70 n n C1 C2 BOG sing 71 n n C1 O5 BOG sing 72 n n C1 H1 BOG sing 73 n n O1 C1' BOG sing 74 n n C2 O2 BOG sing 75 n n C2 C3 BOG sing 76 n n C2 H2 BOG sing 77 n n O2 HO2 BOG sing 78 n n C3 O3 BOG sing 79 n n C3 C4 BOG sing 80 n n C3 H3 BOG sing 81 n n O3 HO3 BOG sing 82 n n C4 O4 BOG sing 83 n n C4 C5 BOG sing 84 n n C4 H4 BOG sing 85 n n O4 HO4 BOG sing 86 n n C5 O5 BOG sing 87 n n C5 C6 BOG sing 88 n n C5 H5 BOG sing 89 n n C6 O6 BOG sing 90 n n C6 H61 BOG sing 91 n n C6 H62 BOG sing 92 n n O6 HO6 BOG sing 93 n n C1' C2' BOG sing 94 n n C1' "H1'1" BOG sing 95 n n C1' "H1'2" BOG sing 96 n n C2' C3' BOG sing 97 n n C2' "H2'1" BOG sing 98 n n C2' "H2'2" BOG sing 99 n n C3' C4' BOG sing 100 n n C3' "H3'1" BOG sing 101 n n C3' "H3'2" BOG sing 102 n n C4' C5' BOG sing 103 n n C4' "H4'1" BOG sing 104 n n C4' "H4'2" BOG sing 105 n n C5' C6' BOG sing 106 n n C5' "H5'1" BOG sing 107 n n C5' "H5'2" BOG sing 108 n n C6' C7' BOG sing 109 n n C6' "H6'1" BOG sing 110 n n C6' "H6'2" BOG sing 111 n n C7' C8' BOG sing 112 n n C7' "H7'1" BOG sing 113 n n C7' "H7'2" BOG sing 114 n n C8' "H8'1" BOG sing 115 n n C8' "H8'2" BOG sing 116 n n C8' "H8'3" BOG sing 117 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 3C02 _atom_sites.fract_transf_matrix[1][1] 0.010819 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 475 475 BOG BOG . C 3 GOL A 1 661 661 GOL GOL . D 3 GOL A 1 662 662 GOL GOL . E 3 GOL A 1 663 663 GOL GOL . F 3 GOL A 1 664 664 GOL GOL . G 3 GOL A 1 665 665 GOL GOL . H 4 HOH A 1 666 1 HOH HOH . H 4 HOH A 2 667 2 HOH HOH . H 4 HOH A 3 668 3 HOH HOH . H 4 HOH A 4 669 4 HOH HOH . H 4 HOH A 5 670 5 HOH HOH . H 4 HOH A 6 671 6 HOH HOH . H 4 HOH A 7 672 7 HOH HOH . H 4 HOH A 8 673 8 HOH HOH . H 4 HOH A 9 674 9 HOH HOH . H 4 HOH A 10 675 10 HOH HOH . H 4 HOH A 11 676 11 HOH HOH . H 4 HOH A 12 677 12 HOH HOH . H 4 HOH A 13 678 13 HOH HOH . H 4 HOH A 14 679 14 HOH HOH . H 4 HOH A 15 680 15 HOH HOH . H 4 HOH A 16 681 16 HOH HOH . H 4 HOH A 17 682 17 HOH HOH . H 4 HOH A 18 683 18 HOH HOH . H 4 HOH A 19 684 19 HOH HOH . H 4 HOH A 20 685 20 HOH HOH . H 4 HOH A 21 686 21 HOH HOH . H 4 HOH A 22 687 22 HOH HOH . H 4 HOH A 23 688 23 HOH HOH . H 4 HOH A 24 689 24 HOH HOH . H 4 HOH A 25 690 25 HOH HOH . H 4 HOH A 26 691 26 HOH HOH . H 4 HOH A 27 692 27 HOH HOH . H 4 HOH A 28 693 28 HOH HOH . H 4 HOH A 29 694 29 HOH HOH . H 4 HOH A 30 695 30 HOH HOH . H 4 HOH A 31 696 31 HOH HOH . H 4 HOH A 32 697 32 HOH HOH . H 4 HOH A 33 698 33 HOH HOH . H 4 HOH A 34 699 34 HOH HOH . H 4 HOH A 35 700 35 HOH HOH . H 4 HOH A 36 701 36 HOH HOH . H 4 HOH A 37 702 37 HOH HOH . H 4 HOH A 38 703 38 HOH HOH . H 4 HOH A 39 704 39 HOH HOH . H 4 HOH A 40 705 40 HOH HOH . H 4 HOH A 41 706 41 HOH HOH . H 4 HOH A 42 707 42 HOH HOH . H 4 HOH A 43 708 43 HOH HOH . H 4 HOH A 44 709 44 HOH HOH . H 4 HOH A 45 710 45 HOH HOH . H 4 HOH A 46 711 46 HOH HOH . H 4 HOH A 47 712 47 HOH HOH . H 4 HOH A 48 713 48 HOH HOH . H 4 HOH A 49 714 49 HOH HOH . H 4 HOH A 50 715 50 HOH HOH . H 4 HOH A 51 716 51 HOH HOH . H 4 HOH A 52 717 52 HOH HOH . H 4 HOH A 53 718 53 HOH HOH . H 4 HOH A 54 719 54 HOH HOH . H 4 HOH A 55 720 55 HOH HOH . H 4 HOH A 56 721 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . B 2 27.814 18.691 8.381 1 118.1 ? C1 BOG 475 A 1 HETATM 2 O O1 BOG . . . B 2 27.744 18.938 9.813 1 113.21 ? O1 BOG 475 A 1 HETATM 3 C C2 BOG . . . B 2 28.517 19.799 7.572 1 119.22 ? C2 BOG 475 A 1 HETATM 4 O O2 BOG . . . B 2 28.13 21.107 7.994 1 120.97 ? O2 BOG 475 A 1 HETATM 5 C C3 BOG . . . B 2 28.196 19.581 6.089 1 119.85 ? C3 BOG 475 A 1 HETATM 6 O O3 BOG . . . B 2 28.667 20.641 5.253 1 119.89 ? O3 BOG 475 A 1 HETATM 7 C C4 BOG . . . B 2 28.796 18.247 5.652 1 120.93 ? C4 BOG 475 A 1 HETATM 8 O O4 BOG . . . B 2 28.46 18.011 4.276 1 121.49 ? O4 BOG 475 A 1 HETATM 9 C C5 BOG . . . B 2 28.253 17.142 6.584 1 121.4 ? C5 BOG 475 A 1 HETATM 10 O O5 BOG . . . B 2 28.471 17.457 7.987 1 120.8 ? O5 BOG 475 A 1 HETATM 11 C C6 BOG . . . B 2 28.756 15.741 6.233 1 121.32 ? C6 BOG 475 A 1 HETATM 12 O O6 BOG . . . B 2 27.648 15.061 5.63 1 121.35 ? O6 BOG 475 A 1 HETATM 13 C C1' BOG . . . B 2 27.24 17.849 10.596 1 108.28 ? C1' BOG 475 A 1 HETATM 14 C C2' BOG . . . B 2 26.714 18.334 11.935 1 104.94 ? C2' BOG 475 A 1 HETATM 15 C C3' BOG . . . B 2 27.309 17.571 13.114 1 102.82 ? C3' BOG 475 A 1 HETATM 16 C C4' BOG . . . B 2 27.01 18.29 14.433 1 101.32 ? C4' BOG 475 A 1 HETATM 17 C C5' BOG . . . B 2 28.252 18.657 15.251 1 99.6 ? C5' BOG 475 A 1 HETATM 18 C C6' BOG . . . B 2 27.903 19.038 16.691 1 98.62 ? C6' BOG 475 A 1 HETATM 19 C C7' BOG . . . B 2 28.64 18.177 17.714 1 97.25 ? C7' BOG 475 A 1 HETATM 20 C C8' BOG . . . B 2 27.803 17.942 18.952 1 95.77 ? C8' BOG 475 A 1 # _model_server_stats.io_time_ms 4 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #