data_3C08 # _model_server_result.job_id zPYHOkN3BHXzY8YYRKqAxw _model_server_result.datetime_utc '2024-10-12 12:28:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c08 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":225}' # _entry.id 3C08 # _exptl.entry_id 3C08 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3C08 _cell.length_a 56.821 _cell.length_b 61.377 _cell.length_c 102.675 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C08 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 87 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? disulf ? disulf2 A SG CYS 133 L CYS 133 1_555 A SG CYS 193 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf4 B SG CYS 148 H CYS 148 1_555 B SG CYS 204 H CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3C08 _atom_sites.fract_transf_matrix[1][1] 0.017599 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009739 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 L 1 214 1 SO4 SO4 . D 3 SO4 H 1 225 2 SO4 SO4 . E 4 HOH L 1 215 3 HOH HOH . E 4 HOH L 2 216 4 HOH HOH . E 4 HOH L 3 217 5 HOH HOH . E 4 HOH L 4 218 6 HOH HOH . E 4 HOH L 5 219 7 HOH HOH . E 4 HOH L 6 220 8 HOH HOH . E 4 HOH L 7 221 9 HOH HOH . E 4 HOH L 8 222 10 HOH HOH . E 4 HOH L 9 223 11 HOH HOH . E 4 HOH L 10 224 12 HOH HOH . E 4 HOH L 11 225 13 HOH HOH . E 4 HOH L 12 226 14 HOH HOH . E 4 HOH L 13 227 15 HOH HOH . E 4 HOH L 14 228 16 HOH HOH . E 4 HOH L 15 229 17 HOH HOH . E 4 HOH L 16 230 18 HOH HOH . E 4 HOH L 17 231 19 HOH HOH . E 4 HOH L 18 232 20 HOH HOH . E 4 HOH L 19 233 21 HOH HOH . E 4 HOH L 20 234 22 HOH HOH . E 4 HOH L 21 235 23 HOH HOH . E 4 HOH L 22 236 24 HOH HOH . E 4 HOH L 23 237 25 HOH HOH . E 4 HOH L 24 238 26 HOH HOH . E 4 HOH L 25 239 27 HOH HOH . E 4 HOH L 26 240 28 HOH HOH . E 4 HOH L 27 241 29 HOH HOH . E 4 HOH L 28 242 30 HOH HOH . E 4 HOH L 29 243 31 HOH HOH . E 4 HOH L 30 244 32 HOH HOH . E 4 HOH L 31 245 33 HOH HOH . E 4 HOH L 32 246 34 HOH HOH . E 4 HOH L 33 247 35 HOH HOH . E 4 HOH L 34 248 36 HOH HOH . E 4 HOH L 35 249 37 HOH HOH . E 4 HOH L 36 250 38 HOH HOH . E 4 HOH L 37 251 39 HOH HOH . E 4 HOH L 38 252 40 HOH HOH . E 4 HOH L 39 253 41 HOH HOH . E 4 HOH L 40 254 42 HOH HOH . E 4 HOH L 41 255 43 HOH HOH . E 4 HOH L 42 256 44 HOH HOH . E 4 HOH L 43 257 45 HOH HOH . E 4 HOH L 44 258 46 HOH HOH . E 4 HOH L 45 259 47 HOH HOH . E 4 HOH L 46 260 95 HOH HOH . E 4 HOH L 47 261 96 HOH HOH . F 4 HOH H 1 226 48 HOH HOH . F 4 HOH H 2 227 49 HOH HOH . F 4 HOH H 3 228 50 HOH HOH . F 4 HOH H 4 229 51 HOH HOH . F 4 HOH H 5 230 52 HOH HOH . F 4 HOH H 6 231 53 HOH HOH . F 4 HOH H 7 232 54 HOH HOH . F 4 HOH H 8 233 55 HOH HOH . F 4 HOH H 9 234 56 HOH HOH . F 4 HOH H 10 235 57 HOH HOH . F 4 HOH H 11 236 58 HOH HOH . F 4 HOH H 12 237 59 HOH HOH . F 4 HOH H 13 238 60 HOH HOH . F 4 HOH H 14 239 61 HOH HOH . F 4 HOH H 15 240 62 HOH HOH . F 4 HOH H 16 241 63 HOH HOH . F 4 HOH H 17 242 64 HOH HOH . F 4 HOH H 18 243 65 HOH HOH . F 4 HOH H 19 244 66 HOH HOH . F 4 HOH H 20 245 67 HOH HOH . F 4 HOH H 21 246 68 HOH HOH . F 4 HOH H 22 247 69 HOH HOH . F 4 HOH H 23 248 70 HOH HOH . F 4 HOH H 24 249 71 HOH HOH . F 4 HOH H 25 250 72 HOH HOH . F 4 HOH H 26 251 73 HOH HOH . F 4 HOH H 27 252 74 HOH HOH . F 4 HOH H 28 253 75 HOH HOH . F 4 HOH H 29 254 76 HOH HOH . F 4 HOH H 30 255 77 HOH HOH . F 4 HOH H 31 256 78 HOH HOH . F 4 HOH H 32 257 79 HOH HOH . F 4 HOH H 33 258 80 HOH HOH . F 4 HOH H 34 259 81 HOH HOH . F 4 HOH H 35 260 82 HOH HOH . F 4 HOH H 36 261 83 HOH HOH . F 4 HOH H 37 262 84 HOH HOH . F 4 HOH H 38 263 85 HOH HOH . F 4 HOH H 39 264 86 HOH HOH . F 4 HOH H 40 265 87 HOH HOH . F 4 HOH H 41 266 88 HOH HOH . F 4 HOH H 42 267 89 HOH HOH . F 4 HOH H 43 268 90 HOH HOH . F 4 HOH H 44 269 91 HOH HOH . F 4 HOH H 45 270 92 HOH HOH . F 4 HOH H 46 271 93 HOH HOH . F 4 HOH H 47 272 94 HOH HOH . F 4 HOH H 48 273 97 HOH HOH . F 4 HOH H 49 274 98 HOH HOH . F 4 HOH H 50 275 99 HOH HOH . F 4 HOH H 51 276 100 HOH HOH . F 4 HOH H 52 277 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -3.745 -11.724 6.246 1 48.36 ? S SO4 225 H 1 HETATM 2 O O1 SO4 . . . D 3 -3.329 -12.031 4.91 1 48.11 ? O1 SO4 225 H 1 HETATM 3 O O2 SO4 . . . D 3 -5.116 -12.149 6.44 1 48.57 ? O2 SO4 225 H 1 HETATM 4 O O3 SO4 . . . D 3 -2.884 -12.401 7.176 1 49.13 ? O3 SO4 225 H 1 HETATM 5 O O4 SO4 . . . D 3 -3.677 -10.309 6.478 1 48.71 ? O4 SO4 225 H 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #