data_3C14
#
_model_server_result.job_id            FjS7NUzYEl1rwWkfHVU1Nw 
_model_server_result.datetime_utc      '2024-11-23 03:14:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3c14 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1}' 
#
_entry.id    3C14 
#
_exptl.entry_id    3C14 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.959 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PYROPHOSPHATE 2-' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3C14 
_cell.length_a            117.874 
_cell.length_b            132.997 
_cell.length_c            69.998 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3C14 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 E O2 POP . A POP 1 1_555 F CA CA . A CA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? 
metalc ? metalc2 E O6 POP . A POP 1 1_555 F CA CA . A CA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
metalc ? metalc3 E O1 POP . A POP 1 1_555 F CA CA . A CA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? 
metalc ? metalc4 F CA CA . A CA 29 1_555 A OD2 ASP 41 A ASP 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? 
metalc ? metalc5 F CA CA . A CA 29 1_555 A O ILE 42 A ILE 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.092 ? 
metalc ? metalc6 F CA CA . A CA 29 1_555 A OD2 ASP 85 A ASP 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc7 C OG SER 54 C SER 54 1_555 G MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc8 C OG1 THR 204 C THR 204 1_555 G MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc9 G MG MG . C MG 403 1_555 I O2G GSP . C GSP 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc10 G MG MG . C MG 403 1_555 I O2B GSP . C GSP 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc11 G MG MG . C MG 403 1_555 I O3G GSP . C GSP 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? 
#
_chem_comp.formula           'H2 O7 P2 -2' 
_chem_comp.formula_weight    175.959 
_chem_comp.id                POP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PYROPHOSPHATE 2-' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1 POP doub 375 n n 
P1 O2 POP sing 376 n n 
P1 O3 POP sing 377 n n 
P1 O POP sing 378 n n 
O2 HO2 POP sing 379 n n 
O P2 POP sing 380 n n 
P2 O4 POP doub 381 n n 
P2 O5 POP sing 382 n n 
P2 O6 POP sing 383 n n 
O5 HO5 POP sing 384 n n 
#
_atom_sites.entry_id                     3C14 
_atom_sites.fract_transf_matrix[1][1]    0.008484 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007519 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014286 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 FOK A 1 101 101 FOK FOK . 
E 5 POP A 1 1 1 POP POP . 
F 6 CA A 1 29 29 CA CA . 
G 7 MG C 1 403 403 MG MG . 
H 8 CL C 1 404 404 CL CL . 
I 9 GSP C 1 405 405 GSP GSP . 
J 10 HOH A 1 8 8 HOH HOH . 
J 10 HOH A 2 18 18 HOH HOH . 
J 10 HOH A 3 20 20 HOH HOH . 
J 10 HOH A 4 22 22 HOH HOH . 
J 10 HOH A 5 30 30 HOH HOH . 
K 10 HOH B 1 10 10 HOH HOH . 
K 10 HOH B 2 19 19 HOH HOH . 
K 10 HOH B 3 21 21 HOH HOH . 
K 10 HOH B 4 24 24 HOH HOH . 
K 10 HOH B 5 25 25 HOH HOH . 
K 10 HOH B 6 40 40 HOH HOH . 
K 10 HOH B 7 41 41 HOH HOH . 
K 10 HOH B 8 46 46 HOH HOH . 
K 10 HOH B 9 49 49 HOH HOH . 
K 10 HOH B 10 50 50 HOH HOH . 
K 10 HOH B 11 51 51 HOH HOH . 
K 10 HOH B 12 59 59 HOH HOH . 
L 10 HOH C 1 406 406 HOH HOH . 
L 10 HOH C 2 407 407 HOH HOH . 
L 10 HOH C 3 408 408 HOH HOH . 
L 10 HOH C 4 409 409 HOH HOH . 
L 10 HOH C 5 410 410 HOH HOH . 
L 10 HOH C 6 411 411 HOH HOH . 
L 10 HOH C 7 412 412 HOH HOH . 
L 10 HOH C 8 413 413 HOH HOH . 
L 10 HOH C 9 414 414 HOH HOH . 
L 10 HOH C 10 415 415 HOH HOH . 
L 10 HOH C 11 416 416 HOH HOH . 
L 10 HOH C 12 417 417 HOH HOH . 
L 10 HOH C 13 418 418 HOH HOH . 
L 10 HOH C 14 419 419 HOH HOH . 
L 10 HOH C 15 420 420 HOH HOH . 
L 10 HOH C 16 421 421 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 POP . . . E 5 0.751 7.439 -24.852 1 67.52 ? P1 POP 1 A 1 
HETATM 2 O O1 POP . . . E 5 0.606 8.071 -23.482 1 68.94 ? O1 POP 1 A 1 
HETATM 3 O O2 POP . . . E 5 0.211 8.358 -25.924 1 68.54 ? O2 POP 1 A 1 
HETATM 4 O O3 POP . . . E 5 2.213 7.182 -25.123 1 68.27 ? O3 POP 1 A 1 
HETATM 5 O O POP . . . E 5 -0.027 6.026 -24.889 1 67.24 ? O POP 1 A 1 
HETATM 6 P P2 POP . . . E 5 -1.448 5.808 -24.159 1 65.97 ? P2 POP 1 A 1 
HETATM 7 O O4 POP . . . E 5 -2.272 4.886 -25.022 1 67.39 ? O4 POP 1 A 1 
HETATM 8 O O5 POP . . . E 5 -1.252 5.18 -22.793 1 68.11 ? O5 POP 1 A 1 
HETATM 9 O O6 POP . . . E 5 -2.177 7.125 -24.017 1 67.96 ? O6 POP 1 A 1 
#
_model_server_stats.io_time_ms              87 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           9 
#