data_3C2B # _model_server_result.job_id wB-dolHleWtwNwHGHl9jnA _model_server_result.datetime_utc '2024-12-26 23:25:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c2b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 3C2B # _exptl.entry_id 3C2B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3C2B _cell.length_a 44.134 _cell.length_b 72.791 _cell.length_c 127.198 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C2B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 65 A ALA 63 1_555 A N MSE 66 A MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 66 A MSE 64 1_555 A N ILE 67 A ILE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ARG 179 A ARG 177 1_555 A N MSE 180 A MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 A C MSE 180 A MSE 178 1_555 A N LEU 181 A LEU 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale5 B C ALA 65 B ALA 63 1_555 B N MSE 66 B MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale6 B C MSE 66 B MSE 64 1_555 B N ILE 67 B ILE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C ARG 179 B ARG 177 1_555 B N MSE 180 B MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale8 B C MSE 180 B MSE 178 1_555 B N LEU 181 B LEU 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 3C2B _atom_sites.fract_transf_matrix[1][1] 0.022658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013738 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007862 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMT A 1 302 302 FMT FMT . D 2 FMT B 1 301 301 FMT FMT . E 3 HOH A 1 303 1 HOH HOH . E 3 HOH A 2 304 4 HOH HOH . E 3 HOH A 3 305 6 HOH HOH . E 3 HOH A 4 306 8 HOH HOH . E 3 HOH A 5 307 10 HOH HOH . E 3 HOH A 6 308 11 HOH HOH . E 3 HOH A 7 309 13 HOH HOH . E 3 HOH A 8 310 14 HOH HOH . E 3 HOH A 9 311 15 HOH HOH . E 3 HOH A 10 312 16 HOH HOH . E 3 HOH A 11 313 17 HOH HOH . E 3 HOH A 12 314 19 HOH HOH . E 3 HOH A 13 315 21 HOH HOH . E 3 HOH A 14 316 24 HOH HOH . E 3 HOH A 15 317 28 HOH HOH . E 3 HOH A 16 318 32 HOH HOH . E 3 HOH A 17 319 33 HOH HOH . E 3 HOH A 18 320 35 HOH HOH . E 3 HOH A 19 321 36 HOH HOH . E 3 HOH A 20 322 41 HOH HOH . E 3 HOH A 21 323 43 HOH HOH . E 3 HOH A 22 324 44 HOH HOH . E 3 HOH A 23 325 46 HOH HOH . E 3 HOH A 24 326 49 HOH HOH . E 3 HOH A 25 327 51 HOH HOH . E 3 HOH A 26 328 53 HOH HOH . E 3 HOH A 27 329 54 HOH HOH . E 3 HOH A 28 330 56 HOH HOH . E 3 HOH A 29 331 57 HOH HOH . E 3 HOH A 30 332 61 HOH HOH . E 3 HOH A 31 333 63 HOH HOH . E 3 HOH A 32 334 73 HOH HOH . E 3 HOH A 33 335 75 HOH HOH . E 3 HOH A 34 336 79 HOH HOH . E 3 HOH A 35 337 80 HOH HOH . E 3 HOH A 36 338 82 HOH HOH . E 3 HOH A 37 339 84 HOH HOH . E 3 HOH A 38 340 86 HOH HOH . E 3 HOH A 39 341 88 HOH HOH . E 3 HOH A 40 342 89 HOH HOH . E 3 HOH A 41 343 91 HOH HOH . E 3 HOH A 42 344 92 HOH HOH . E 3 HOH A 43 345 94 HOH HOH . F 3 HOH B 1 302 2 HOH HOH . F 3 HOH B 2 303 5 HOH HOH . F 3 HOH B 3 304 7 HOH HOH . F 3 HOH B 4 305 9 HOH HOH . F 3 HOH B 5 306 12 HOH HOH . F 3 HOH B 6 307 18 HOH HOH . F 3 HOH B 7 308 20 HOH HOH . F 3 HOH B 8 309 22 HOH HOH . F 3 HOH B 9 310 23 HOH HOH . F 3 HOH B 10 311 25 HOH HOH . F 3 HOH B 11 312 26 HOH HOH . F 3 HOH B 12 313 27 HOH HOH . F 3 HOH B 13 314 30 HOH HOH . F 3 HOH B 14 315 31 HOH HOH . F 3 HOH B 15 316 34 HOH HOH . F 3 HOH B 16 317 37 HOH HOH . F 3 HOH B 17 318 38 HOH HOH . F 3 HOH B 18 319 39 HOH HOH . F 3 HOH B 19 320 40 HOH HOH . F 3 HOH B 20 321 42 HOH HOH . F 3 HOH B 21 322 45 HOH HOH . F 3 HOH B 22 323 47 HOH HOH . F 3 HOH B 23 324 48 HOH HOH . F 3 HOH B 24 325 50 HOH HOH . F 3 HOH B 25 326 52 HOH HOH . F 3 HOH B 26 327 55 HOH HOH . F 3 HOH B 27 328 58 HOH HOH . F 3 HOH B 28 329 59 HOH HOH . F 3 HOH B 29 330 60 HOH HOH . F 3 HOH B 30 331 62 HOH HOH . F 3 HOH B 31 332 64 HOH HOH . F 3 HOH B 32 333 65 HOH HOH . F 3 HOH B 33 334 66 HOH HOH . F 3 HOH B 34 335 67 HOH HOH . F 3 HOH B 35 336 68 HOH HOH . F 3 HOH B 36 337 69 HOH HOH . F 3 HOH B 37 338 70 HOH HOH . F 3 HOH B 38 339 71 HOH HOH . F 3 HOH B 39 340 72 HOH HOH . F 3 HOH B 40 341 74 HOH HOH . F 3 HOH B 41 342 76 HOH HOH . F 3 HOH B 42 343 77 HOH HOH . F 3 HOH B 43 344 78 HOH HOH . F 3 HOH B 44 345 81 HOH HOH . F 3 HOH B 45 346 83 HOH HOH . F 3 HOH B 46 347 85 HOH HOH . F 3 HOH B 47 348 87 HOH HOH . F 3 HOH B 48 349 90 HOH HOH . F 3 HOH B 49 350 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 2 28.503 49.822 99.882 1 61.33 ? C FMT 301 B 1 HETATM 2 O O1 FMT . . . D 2 27.352 50.235 99.886 1 60.71 ? O1 FMT 301 B 1 HETATM 3 O O2 FMT . . . D 2 29.471 50.569 99.997 1 62.26 ? O2 FMT 301 B 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 73 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 3 #