data_3C2S # _model_server_result.job_id wFHuBTxrbaYlqn1LJ8ranA _model_server_result.datetime_utc '2024-11-28 20:20:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c2s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":451}' # _entry.id 3C2S # _exptl.entry_id 3C2S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3C2S _cell.length_a 50.178 _cell.length_b 147.301 _cell.length_c 75.473 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C2S _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_654 -x+1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 50.178 0 -37.7365 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 2 4 3 MAN BMA C1 O1 . O6 HO6 . sing 4 ? 2 5 4 NAG MAN C1 O1 . O2 HO2 . sing 5 ? 2 6 5 GAL NAG C1 O1 . O4 HO4 . sing 6 ? 2 7 3 MAN BMA C1 O1 . O3 HO3 . sing 7 ? 2 8 7 NAG MAN C1 O1 . O2 HO2 . sing 8 ? 2 9 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG C 1 NAG 2 n B NAG 2 B 2 NAG C 2 NAG 2 n B BMA 3 B 3 BMA C 3 BMA 2 n B MAN 4 B 4 MAN C 7 MAN 2 n B NAG 5 B 5 NAG C 8 NAG 2 n B GAL 6 B 6 GAL C 9 GAL 2 n B MAN 7 B 7 MAN C 4 MAN 2 n B NAG 8 B 8 NAG C 5 NAG 2 n B FUC 9 B 9 FUC C 11 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 39 A CYS 261 1_555 A SG CYS 99 A CYS 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 145 A CYS 367 1_555 A SG CYS 203 A CYS 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? covale ? covale1 A ND2 ASN 75 A ASN 297 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale2 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale3 B O6 NAG . B NAG 1 1_555 B C1 FUC . B FUC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.394 ? covale ? covale4 B O4 NAG . B NAG 2 1_555 B C1 BMA . B BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale5 B O6 BMA . B BMA 3 1_555 B C1 MAN . B MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale6 B O3 BMA . B BMA 3 1_555 B C1 MAN . B MAN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale7 B O2 MAN . B MAN 4 1_555 B C1 NAG . B NAG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale8 B O4 NAG . B NAG 5 1_555 B C1 GAL . B GAL 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale9 B O2 MAN . B MAN 7 1_555 B C1 NAG . B NAG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? metalc ? metalc1 A NE2 HIS 88 A HIS 310 1_555 C ZN ZN . A ZN 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc2 A OE1 GLU 96 A GLU 318 1_555 E ZN ZN . A ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc3 A OE2 GLU 96 A GLU 318 1_555 E ZN ZN . A ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc4 A NE2 HIS 213 A HIS 435 1_555 C ZN ZN . A ZN 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc5 C ZN ZN . A ZN 448 1_555 G O HOH . A HOH 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc6 C ZN ZN . A ZN 448 1_555 G O HOH . A HOH 485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc7 D ZN ZN . A ZN 449 1_555 G O HOH . A HOH 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc8 D ZN ZN . A ZN 449 1_555 G O HOH . A HOH 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3C2S _atom_sites.fract_transf_matrix[1][1] 0.019929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006789 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01325 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 448 1 ZN ZN . D 3 ZN A 1 449 2 ZN ZN . E 3 ZN A 1 450 3 ZN ZN . F 3 ZN A 1 451 4 ZN ZN . G 4 HOH A 1 452 1 HOH HOH . G 4 HOH A 2 453 2 HOH HOH . G 4 HOH A 3 454 3 HOH HOH . G 4 HOH A 4 455 4 HOH HOH . G 4 HOH A 5 456 5 HOH HOH . G 4 HOH A 6 457 6 HOH HOH . G 4 HOH A 7 458 7 HOH HOH . G 4 HOH A 8 459 8 HOH HOH . G 4 HOH A 9 460 9 HOH HOH . G 4 HOH A 10 461 10 HOH HOH . G 4 HOH A 11 462 11 HOH HOH . G 4 HOH A 12 463 12 HOH HOH . G 4 HOH A 13 464 13 HOH HOH . G 4 HOH A 14 465 14 HOH HOH . G 4 HOH A 15 466 15 HOH HOH . G 4 HOH A 16 467 16 HOH HOH . G 4 HOH A 17 468 17 HOH HOH . G 4 HOH A 18 469 18 HOH HOH . G 4 HOH A 19 470 19 HOH HOH . G 4 HOH A 20 471 20 HOH HOH . G 4 HOH A 21 472 21 HOH HOH . G 4 HOH A 22 473 22 HOH HOH . G 4 HOH A 23 474 23 HOH HOH . G 4 HOH A 24 475 24 HOH HOH . G 4 HOH A 25 476 25 HOH HOH . G 4 HOH A 26 477 26 HOH HOH . G 4 HOH A 27 478 27 HOH HOH . G 4 HOH A 28 479 28 HOH HOH . G 4 HOH A 29 480 29 HOH HOH . G 4 HOH A 30 481 30 HOH HOH . G 4 HOH A 31 482 31 HOH HOH . G 4 HOH A 32 483 32 HOH HOH . G 4 HOH A 33 484 33 HOH HOH . G 4 HOH A 34 485 34 HOH HOH . G 4 HOH A 35 486 35 HOH HOH . G 4 HOH A 36 487 36 HOH HOH . G 4 HOH A 37 488 37 HOH HOH . G 4 HOH A 38 489 38 HOH HOH . G 4 HOH A 39 490 39 HOH HOH . G 4 HOH A 40 491 40 HOH HOH . G 4 HOH A 41 492 41 HOH HOH . G 4 HOH A 42 493 42 HOH HOH . G 4 HOH A 43 494 43 HOH HOH . G 4 HOH A 44 495 44 HOH HOH . G 4 HOH A 45 496 45 HOH HOH . G 4 HOH A 46 497 46 HOH HOH . G 4 HOH A 47 498 47 HOH HOH . G 4 HOH A 48 499 48 HOH HOH . G 4 HOH A 49 500 49 HOH HOH . G 4 HOH A 50 501 50 HOH HOH . G 4 HOH A 51 502 51 HOH HOH . G 4 HOH A 52 503 52 HOH HOH . G 4 HOH A 53 504 53 HOH HOH . G 4 HOH A 54 505 54 HOH HOH . G 4 HOH A 55 506 55 HOH HOH . G 4 HOH A 56 507 56 HOH HOH . G 4 HOH A 57 508 57 HOH HOH . G 4 HOH A 58 509 58 HOH HOH . G 4 HOH A 59 510 59 HOH HOH . G 4 HOH A 60 511 60 HOH HOH . G 4 HOH A 61 512 61 HOH HOH . G 4 HOH A 62 513 62 HOH HOH . G 4 HOH A 63 514 63 HOH HOH . G 4 HOH A 64 515 64 HOH HOH . G 4 HOH A 65 516 65 HOH HOH . G 4 HOH A 66 517 66 HOH HOH . G 4 HOH A 67 518 67 HOH HOH . G 4 HOH A 68 519 68 HOH HOH . G 4 HOH A 69 520 69 HOH HOH . G 4 HOH A 70 521 70 HOH HOH . G 4 HOH A 71 522 71 HOH HOH . G 4 HOH A 72 523 72 HOH HOH . G 4 HOH A 73 524 73 HOH HOH . G 4 HOH A 74 525 74 HOH HOH . G 4 HOH A 75 526 75 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 4.094 _atom_site.Cartn_y -7.924 _atom_site.Cartn_z -14.198 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 63.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 451 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #