data_3C2V # _model_server_result.job_id QPGNXHw_252s9q7rRir5Lg _model_server_result.datetime_utc '2024-10-27 22:32:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c2v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 3C2V # _exptl.entry_id 3C2V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.131 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHTHALIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3C2V _cell.length_a 154.668 _cell.length_b 154.668 _cell.length_c 69.346 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C2V _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 69.346 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 69.346 5 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 69.346 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H6 O4' _chem_comp.formula_weight 166.131 _chem_comp.id PHT _chem_comp.mon_nstd_flag . _chem_comp.name 'PHTHALIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O8 C7 PHT doub 260 n n O9 C7 PHT sing 261 n n O9 H9 PHT sing 262 n n C10 O11 PHT doub 263 n n C10 O12 PHT sing 264 n n C10 C2 PHT sing 265 n n O12 H12 PHT sing 266 n n C7 C3 PHT sing 267 n n C1 C2 PHT doub 268 n y C1 C6 PHT sing 269 n y C1 H1 PHT sing 270 n n C2 C3 PHT sing 271 n y C3 C4 PHT doub 272 n y C4 C5 PHT sing 273 n y C4 H4 PHT sing 274 n n C5 C6 PHT doub 275 n y C5 H5 PHT sing 276 n n C6 H6 PHT sing 277 n n # _atom_sites.entry_id 3C2V _atom_sites.fract_transf_matrix[1][1] 0.006465 _atom_sites.fract_transf_matrix[1][2] 0.003733 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01442 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PRP A 1 300 300 PRP PRP . C 3 PHT A 1 301 301 PHT PHT . D 4 HOH A 1 302 302 HOH HOH . D 4 HOH A 2 303 303 HOH HOH . D 4 HOH A 3 304 304 HOH HOH . D 4 HOH A 4 305 305 HOH HOH . D 4 HOH A 5 306 306 HOH HOH . D 4 HOH A 6 307 307 HOH HOH . D 4 HOH A 7 308 308 HOH HOH . D 4 HOH A 8 309 309 HOH HOH . D 4 HOH A 9 310 310 HOH HOH . D 4 HOH A 10 311 311 HOH HOH . D 4 HOH A 11 312 312 HOH HOH . D 4 HOH A 12 313 313 HOH HOH . D 4 HOH A 13 314 314 HOH HOH . D 4 HOH A 14 315 315 HOH HOH . D 4 HOH A 15 316 316 HOH HOH . D 4 HOH A 16 317 317 HOH HOH . D 4 HOH A 17 319 319 HOH HOH . D 4 HOH A 18 320 320 HOH HOH . D 4 HOH A 19 321 321 HOH HOH . D 4 HOH A 20 322 322 HOH HOH . D 4 HOH A 21 323 323 HOH HOH . D 4 HOH A 22 324 324 HOH HOH . D 4 HOH A 23 325 325 HOH HOH . D 4 HOH A 24 326 326 HOH HOH . D 4 HOH A 25 327 327 HOH HOH . D 4 HOH A 26 328 328 HOH HOH . D 4 HOH A 27 329 329 HOH HOH . D 4 HOH A 28 330 330 HOH HOH . D 4 HOH A 29 331 331 HOH HOH . D 4 HOH A 30 332 332 HOH HOH . D 4 HOH A 31 333 333 HOH HOH . D 4 HOH A 32 334 334 HOH HOH . D 4 HOH A 33 335 335 HOH HOH . D 4 HOH A 34 336 336 HOH HOH . D 4 HOH A 35 337 337 HOH HOH . D 4 HOH A 36 338 338 HOH HOH . D 4 HOH A 37 339 339 HOH HOH . D 4 HOH A 38 340 340 HOH HOH . D 4 HOH A 39 341 341 HOH HOH . D 4 HOH A 40 342 342 HOH HOH . D 4 HOH A 41 343 343 HOH HOH . D 4 HOH A 42 344 344 HOH HOH . D 4 HOH A 43 345 345 HOH HOH . D 4 HOH A 44 346 346 HOH HOH . D 4 HOH A 45 347 347 HOH HOH . D 4 HOH A 46 348 348 HOH HOH . D 4 HOH A 47 349 349 HOH HOH . D 4 HOH A 48 350 350 HOH HOH . D 4 HOH A 49 351 351 HOH HOH . D 4 HOH A 50 352 352 HOH HOH . D 4 HOH A 51 353 353 HOH HOH . D 4 HOH A 52 354 354 HOH HOH . D 4 HOH A 53 355 355 HOH HOH . D 4 HOH A 54 356 356 HOH HOH . D 4 HOH A 55 357 357 HOH HOH . D 4 HOH A 56 358 358 HOH HOH . D 4 HOH A 57 359 359 HOH HOH . D 4 HOH A 58 360 360 HOH HOH . D 4 HOH A 59 361 361 HOH HOH . D 4 HOH A 60 362 362 HOH HOH . D 4 HOH A 61 363 363 HOH HOH . D 4 HOH A 62 364 364 HOH HOH . D 4 HOH A 63 365 365 HOH HOH . D 4 HOH A 64 366 366 HOH HOH . D 4 HOH A 65 367 367 HOH HOH . D 4 HOH A 66 368 368 HOH HOH . D 4 HOH A 67 369 369 HOH HOH . D 4 HOH A 68 370 370 HOH HOH . D 4 HOH A 69 371 371 HOH HOH . D 4 HOH A 70 372 372 HOH HOH . D 4 HOH A 71 373 373 HOH HOH . D 4 HOH A 72 374 374 HOH HOH . D 4 HOH A 73 375 375 HOH HOH . D 4 HOH A 74 376 376 HOH HOH . D 4 HOH A 75 377 377 HOH HOH . D 4 HOH A 76 378 378 HOH HOH . D 4 HOH A 77 379 379 HOH HOH . D 4 HOH A 78 380 380 HOH HOH . D 4 HOH A 79 381 381 HOH HOH . D 4 HOH A 80 382 382 HOH HOH . D 4 HOH A 81 383 383 HOH HOH . D 4 HOH A 82 384 384 HOH HOH . D 4 HOH A 83 385 385 HOH HOH . D 4 HOH A 84 386 386 HOH HOH . D 4 HOH A 85 387 387 HOH HOH . D 4 HOH A 86 388 388 HOH HOH . D 4 HOH A 87 389 389 HOH HOH . D 4 HOH A 88 390 390 HOH HOH . D 4 HOH A 89 391 391 HOH HOH . D 4 HOH A 90 392 392 HOH HOH . D 4 HOH A 91 393 393 HOH HOH . D 4 HOH A 92 394 394 HOH HOH . D 4 HOH A 93 395 395 HOH HOH . D 4 HOH A 94 396 396 HOH HOH . D 4 HOH A 95 397 397 HOH HOH . D 4 HOH A 96 398 398 HOH HOH . D 4 HOH A 97 399 399 HOH HOH . D 4 HOH A 98 400 400 HOH HOH . D 4 HOH A 99 401 401 HOH HOH . D 4 HOH A 100 402 402 HOH HOH . D 4 HOH A 101 403 403 HOH HOH . D 4 HOH A 102 404 404 HOH HOH . D 4 HOH A 103 405 405 HOH HOH . D 4 HOH A 104 406 406 HOH HOH . D 4 HOH A 105 407 407 HOH HOH . D 4 HOH A 106 408 408 HOH HOH . D 4 HOH A 107 409 409 HOH HOH . D 4 HOH A 108 410 410 HOH HOH . D 4 HOH A 109 411 411 HOH HOH . D 4 HOH A 110 412 412 HOH HOH . D 4 HOH A 111 413 413 HOH HOH . D 4 HOH A 112 414 414 HOH HOH . D 4 HOH A 113 415 415 HOH HOH . D 4 HOH A 114 416 416 HOH HOH . D 4 HOH A 115 417 417 HOH HOH . D 4 HOH A 116 418 418 HOH HOH . D 4 HOH A 117 419 419 HOH HOH . D 4 HOH A 118 420 420 HOH HOH . D 4 HOH A 119 421 421 HOH HOH . D 4 HOH A 120 422 422 HOH HOH . D 4 HOH A 121 423 423 HOH HOH . D 4 HOH A 122 424 424 HOH HOH . D 4 HOH A 123 425 425 HOH HOH . D 4 HOH A 124 426 426 HOH HOH . D 4 HOH A 125 427 427 HOH HOH . D 4 HOH A 126 428 428 HOH HOH . D 4 HOH A 127 429 429 HOH HOH . D 4 HOH A 128 430 430 HOH HOH . D 4 HOH A 129 431 431 HOH HOH . D 4 HOH A 130 432 432 HOH HOH . D 4 HOH A 131 433 433 HOH HOH . D 4 HOH A 132 434 434 HOH HOH . D 4 HOH A 133 435 435 HOH HOH . D 4 HOH A 134 436 436 HOH HOH . D 4 HOH A 135 437 437 HOH HOH . D 4 HOH A 136 438 438 HOH HOH . D 4 HOH A 137 439 439 HOH HOH . D 4 HOH A 138 440 440 HOH HOH . D 4 HOH A 139 441 441 HOH HOH . D 4 HOH A 140 442 442 HOH HOH . D 4 HOH A 141 443 443 HOH HOH . D 4 HOH A 142 445 445 HOH HOH . D 4 HOH A 143 446 446 HOH HOH . D 4 HOH A 144 447 447 HOH HOH . D 4 HOH A 145 448 448 HOH HOH . D 4 HOH A 146 449 449 HOH HOH . D 4 HOH A 147 450 450 HOH HOH . D 4 HOH A 148 451 451 HOH HOH . D 4 HOH A 149 452 452 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O8 PHT . . . C 3 -22.949 -13.043 42.027 1 36.82 ? O8 PHT 301 A 1 HETATM 2 O O9 PHT . . . C 3 -24.057 -13.539 43.872 1 39.05 ? O9 PHT 301 A 1 HETATM 3 C C10 PHT . . . C 3 -24.947 -10.707 41.329 1 38.7 ? C10 PHT 301 A 1 HETATM 4 O O11 PHT . . . C 3 -25.052 -9.867 40.406 1 36.65 ? O11 PHT 301 A 1 HETATM 5 O O12 PHT . . . C 3 -24.303 -10.506 42.378 1 37.79 ? O12 PHT 301 A 1 HETATM 6 C C7 PHT . . . C 3 -24.007 -13.264 42.655 1 39.75 ? C7 PHT 301 A 1 HETATM 7 C C1 PHT . . . C 3 -26.839 -12.064 40.379 1 39.77 ? C1 PHT 301 A 1 HETATM 8 C C2 PHT . . . C 3 -25.699 -12.036 41.181 1 39.2 ? C2 PHT 301 A 1 HETATM 9 C C3 PHT . . . C 3 -25.328 -13.182 41.881 1 39.29 ? C3 PHT 301 A 1 HETATM 10 C C4 PHT . . . C 3 -26.102 -14.332 41.79 1 40.14 ? C4 PHT 301 A 1 HETATM 11 C C5 PHT . . . C 3 -27.245 -14.357 40.991 1 38.36 ? C5 PHT 301 A 1 HETATM 12 C C6 PHT . . . C 3 -27.61 -13.219 40.282 1 38.16 ? C6 PHT 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #