data_3C3C
#
_model_server_result.job_id            dNcgwnjDTQD94qYfeQ9zZw 
_model_server_result.datetime_utc      '2024-11-05 23:29:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3c3c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":418}' 
#
_entry.id    3C3C 
#
_exptl.entry_id    3C3C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              186.057 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-PHOSPHOGLYCERIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         78.95 
_cell.angle_beta          84.51 
_cell.angle_gamma         83.23 
_cell.entry_id            3C3C 
_cell.length_a            35.789 
_cell.length_b            55.824 
_cell.length_c            94.497 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3C3C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,G 1 1 
B,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 102 B CYS 98 1_555 B SG CYS 111 B CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 A OD1 ASP 222 A ASP 218 1_555 C MG MG . A MG 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? 
#
_chem_comp.formula           'C3 H7 O7 P' 
_chem_comp.formula_weight    186.057 
_chem_comp.id                3PG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-PHOSPHOGLYCERIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 3PG doub 1 n n 
C1 O2 3PG sing 2 n n 
C1 C2 3PG sing 3 n n 
O2 HO2 3PG sing 4 n n 
C2 O3 3PG sing 5 n n 
C2 C3 3PG sing 6 n n 
C2 H2 3PG sing 7 n n 
O3 HO3 3PG sing 8 n n 
C3 O1P 3PG sing 9 n n 
C3 H31 3PG sing 10 n n 
C3 H32 3PG sing 11 n n 
O1P P 3PG sing 12 n n 
P O2P 3PG doub 13 n n 
P O3P 3PG sing 14 n n 
P O4P 3PG sing 15 n n 
O3P HOP3 3PG sing 16 n n 
O4P HOP4 3PG sing 17 n n 
#
_atom_sites.entry_id                     3C3C 
_atom_sites.fract_transf_matrix[1][1]    0.027942 
_atom_sites.fract_transf_matrix[1][2]    -0.003319 
_atom_sites.fract_transf_matrix[1][3]    -0.002117 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018039 
_atom_sites.fract_transf_matrix[2][3]    -0.00335 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010813 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 417 1 MG MG . 
D 3 3PG A 1 418 1 3PG MP3 . 
E 4 CDP A 1 419 1 CDP CDP . 
F 3 3PG B 1 417 1 3PG MP3 . 
G 5 HOH A 1 420 2 HOH HOH . 
G 5 HOH A 2 421 4 HOH HOH . 
G 5 HOH A 3 422 5 HOH HOH . 
G 5 HOH A 4 423 6 HOH HOH . 
G 5 HOH A 5 424 7 HOH HOH . 
G 5 HOH A 6 425 8 HOH HOH . 
G 5 HOH A 7 426 10 HOH HOH . 
G 5 HOH A 8 427 13 HOH HOH . 
G 5 HOH A 9 428 14 HOH HOH . 
G 5 HOH A 10 429 15 HOH HOH . 
G 5 HOH A 11 430 16 HOH HOH . 
G 5 HOH A 12 431 17 HOH HOH . 
G 5 HOH A 13 432 18 HOH HOH . 
G 5 HOH A 14 433 19 HOH HOH . 
G 5 HOH A 15 434 21 HOH HOH . 
G 5 HOH A 16 435 22 HOH HOH . 
G 5 HOH A 17 436 26 HOH HOH . 
G 5 HOH A 18 437 27 HOH HOH . 
G 5 HOH A 19 438 30 HOH HOH . 
G 5 HOH A 20 439 33 HOH HOH . 
G 5 HOH A 21 440 34 HOH HOH . 
G 5 HOH A 22 441 38 HOH HOH . 
G 5 HOH A 23 442 39 HOH HOH . 
G 5 HOH A 24 443 40 HOH HOH . 
G 5 HOH A 25 444 41 HOH HOH . 
G 5 HOH A 26 445 42 HOH HOH . 
G 5 HOH A 27 446 43 HOH HOH . 
G 5 HOH A 28 447 46 HOH HOH . 
G 5 HOH A 29 448 47 HOH HOH . 
G 5 HOH A 30 449 48 HOH HOH . 
G 5 HOH A 31 450 51 HOH HOH . 
G 5 HOH A 32 451 54 HOH HOH . 
G 5 HOH A 33 452 58 HOH HOH . 
G 5 HOH A 34 453 61 HOH HOH . 
G 5 HOH A 35 454 67 HOH HOH . 
G 5 HOH A 36 455 70 HOH HOH . 
G 5 HOH A 37 456 71 HOH HOH . 
G 5 HOH A 38 457 77 HOH HOH . 
G 5 HOH A 39 458 80 HOH HOH . 
G 5 HOH A 40 459 83 HOH HOH . 
G 5 HOH A 41 460 85 HOH HOH . 
G 5 HOH A 42 461 86 HOH HOH . 
G 5 HOH A 43 462 89 HOH HOH . 
G 5 HOH A 44 463 92 HOH HOH . 
G 5 HOH A 45 464 93 HOH HOH . 
G 5 HOH A 46 465 97 HOH HOH . 
G 5 HOH A 47 466 98 HOH HOH . 
G 5 HOH A 48 467 99 HOH HOH . 
G 5 HOH A 49 468 100 HOH HOH . 
G 5 HOH A 50 469 101 HOH HOH . 
G 5 HOH A 51 470 107 HOH HOH . 
G 5 HOH A 52 471 110 HOH HOH . 
G 5 HOH A 53 472 113 HOH HOH . 
G 5 HOH A 54 473 114 HOH HOH . 
G 5 HOH A 55 474 116 HOH HOH . 
G 5 HOH A 56 475 118 HOH HOH . 
G 5 HOH A 57 476 119 HOH HOH . 
G 5 HOH A 58 477 121 HOH HOH . 
G 5 HOH A 59 478 123 HOH HOH . 
G 5 HOH A 60 479 124 HOH HOH . 
G 5 HOH A 61 480 125 HOH HOH . 
G 5 HOH A 62 481 127 HOH HOH . 
G 5 HOH A 63 482 130 HOH HOH . 
G 5 HOH A 64 483 131 HOH HOH . 
G 5 HOH A 65 484 132 HOH HOH . 
G 5 HOH A 66 485 133 HOH HOH . 
G 5 HOH A 67 486 134 HOH HOH . 
G 5 HOH A 68 487 135 HOH HOH . 
G 5 HOH A 69 488 137 HOH HOH . 
G 5 HOH A 70 489 139 HOH HOH . 
G 5 HOH A 71 490 141 HOH HOH . 
G 5 HOH A 72 491 150 HOH HOH . 
G 5 HOH A 73 492 152 HOH HOH . 
G 5 HOH A 74 493 155 HOH HOH . 
G 5 HOH A 75 494 157 HOH HOH . 
G 5 HOH A 76 495 158 HOH HOH . 
G 5 HOH A 77 496 160 HOH HOH . 
G 5 HOH A 78 497 161 HOH HOH . 
G 5 HOH A 79 498 164 HOH HOH . 
G 5 HOH A 80 499 165 HOH HOH . 
G 5 HOH A 81 500 166 HOH HOH . 
G 5 HOH A 82 501 169 HOH HOH . 
G 5 HOH A 83 502 170 HOH HOH . 
G 5 HOH A 84 503 172 HOH HOH . 
G 5 HOH A 85 504 173 HOH HOH . 
G 5 HOH A 86 505 175 HOH HOH . 
G 5 HOH A 87 506 177 HOH HOH . 
G 5 HOH A 88 507 182 HOH HOH . 
G 5 HOH A 89 508 185 HOH HOH . 
H 5 HOH B 1 418 1 HOH HOH . 
H 5 HOH B 2 419 9 HOH HOH . 
H 5 HOH B 3 420 11 HOH HOH . 
H 5 HOH B 4 421 12 HOH HOH . 
H 5 HOH B 5 422 20 HOH HOH . 
H 5 HOH B 6 423 23 HOH HOH . 
H 5 HOH B 7 424 24 HOH HOH . 
H 5 HOH B 8 425 25 HOH HOH . 
H 5 HOH B 9 426 28 HOH HOH . 
H 5 HOH B 10 427 29 HOH HOH . 
H 5 HOH B 11 428 31 HOH HOH . 
H 5 HOH B 12 429 32 HOH HOH . 
H 5 HOH B 13 430 35 HOH HOH . 
H 5 HOH B 14 431 36 HOH HOH . 
H 5 HOH B 15 432 37 HOH HOH . 
H 5 HOH B 16 433 44 HOH HOH . 
H 5 HOH B 17 434 45 HOH HOH . 
H 5 HOH B 18 435 49 HOH HOH . 
H 5 HOH B 19 436 50 HOH HOH . 
H 5 HOH B 20 437 52 HOH HOH . 
H 5 HOH B 21 438 53 HOH HOH . 
H 5 HOH B 22 439 55 HOH HOH . 
H 5 HOH B 23 440 56 HOH HOH . 
H 5 HOH B 24 441 57 HOH HOH . 
H 5 HOH B 25 442 59 HOH HOH . 
H 5 HOH B 26 443 60 HOH HOH . 
H 5 HOH B 27 444 62 HOH HOH . 
H 5 HOH B 28 445 63 HOH HOH . 
H 5 HOH B 29 446 64 HOH HOH . 
H 5 HOH B 30 447 65 HOH HOH . 
H 5 HOH B 31 448 66 HOH HOH . 
H 5 HOH B 32 449 68 HOH HOH . 
H 5 HOH B 33 450 69 HOH HOH . 
H 5 HOH B 34 451 73 HOH HOH . 
H 5 HOH B 35 452 74 HOH HOH . 
H 5 HOH B 36 453 75 HOH HOH . 
H 5 HOH B 37 454 76 HOH HOH . 
H 5 HOH B 38 455 78 HOH HOH . 
H 5 HOH B 39 456 79 HOH HOH . 
H 5 HOH B 40 457 81 HOH HOH . 
H 5 HOH B 41 458 82 HOH HOH . 
H 5 HOH B 42 459 84 HOH HOH . 
H 5 HOH B 43 460 87 HOH HOH . 
H 5 HOH B 44 461 88 HOH HOH . 
H 5 HOH B 45 462 90 HOH HOH . 
H 5 HOH B 46 463 91 HOH HOH . 
H 5 HOH B 47 464 94 HOH HOH . 
H 5 HOH B 48 465 95 HOH HOH . 
H 5 HOH B 49 466 96 HOH HOH . 
H 5 HOH B 50 467 102 HOH HOH . 
H 5 HOH B 51 468 104 HOH HOH . 
H 5 HOH B 52 469 105 HOH HOH . 
H 5 HOH B 53 470 106 HOH HOH . 
H 5 HOH B 54 471 108 HOH HOH . 
H 5 HOH B 55 472 111 HOH HOH . 
H 5 HOH B 56 473 112 HOH HOH . 
H 5 HOH B 57 474 115 HOH HOH . 
H 5 HOH B 58 475 120 HOH HOH . 
H 5 HOH B 59 476 122 HOH HOH . 
H 5 HOH B 60 477 126 HOH HOH . 
H 5 HOH B 61 478 129 HOH HOH . 
H 5 HOH B 62 479 138 HOH HOH . 
H 5 HOH B 63 480 140 HOH HOH . 
H 5 HOH B 64 481 142 HOH HOH . 
H 5 HOH B 65 482 143 HOH HOH . 
H 5 HOH B 66 483 144 HOH HOH . 
H 5 HOH B 67 484 145 HOH HOH . 
H 5 HOH B 68 485 147 HOH HOH . 
H 5 HOH B 69 486 149 HOH HOH . 
H 5 HOH B 70 487 151 HOH HOH . 
H 5 HOH B 71 488 153 HOH HOH . 
H 5 HOH B 72 489 154 HOH HOH . 
H 5 HOH B 73 490 156 HOH HOH . 
H 5 HOH B 74 491 159 HOH HOH . 
H 5 HOH B 75 492 162 HOH HOH . 
H 5 HOH B 76 493 163 HOH HOH . 
H 5 HOH B 77 494 168 HOH HOH . 
H 5 HOH B 78 495 176 HOH HOH . 
H 5 HOH B 79 496 178 HOH HOH . 
H 5 HOH B 80 497 181 HOH HOH . 
H 5 HOH B 81 498 183 HOH HOH . 
H 5 HOH B 82 499 184 HOH HOH . 
H 5 HOH B 83 500 186 HOH HOH . 
H 5 HOH B 84 501 187 HOH HOH . 
H 5 HOH B 85 502 188 HOH HOH . 
H 5 HOH B 86 503 189 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 3PG . . . D 3 7.155 7.149 23.013 1 13.15 ? C1 3PG 418 A 1 
HETATM 2 O O1 3PG . . . D 3 6.49 6.249 23.566 1 14.63 ? O1 3PG 418 A 1 
HETATM 3 O O2 3PG . . . D 3 8.364 7.3 23.294 1 11.74 ? O2 3PG 418 A 1 
HETATM 4 C C2 3PG . . . D 3 6.49 8.025 21.959 1 21.4 ? C2 3PG 418 A 1 
HETATM 5 O O3 3PG . . . D 3 7.344 9.054 21.392 1 17.93 ? O3 3PG 418 A 1 
HETATM 6 C C3 3PG . . . D 3 5.221 8.655 22.509 1 16.93 ? C3 3PG 418 A 1 
HETATM 7 O O1P 3PG . . . D 3 5.585 9.456 23.624 1 18.76 ? O1P 3PG 418 A 1 
HETATM 8 P P 3PG . . . D 3 4.598 9.678 24.896 1 20.79 ? P 3PG 418 A 1 
HETATM 9 O O2P 3PG . . . D 3 4.749 8.347 25.562 1 22.62 ? O2P 3PG 418 A 1 
HETATM 10 O O3P 3PG . . . D 3 3.173 9.942 24.392 1 19.73 ? O3P 3PG 418 A 1 
HETATM 11 O O4P 3PG . . . D 3 5.252 10.828 25.624 1 14.23 ? O4P 3PG 418 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           11 
#