data_3C3S # _model_server_result.job_id xhyOuPNaTXdv_s3bOpm8Mw _model_server_result.datetime_utc '2025-01-05 00:46:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c3s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":199}' # _entry.id 3C3S # _exptl.entry_id 3C3S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment 'Sulfate ion' _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3C3S _cell.length_a 81.27 _cell.length_b 81.27 _cell.length_c 242.501 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C3S _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1,2 A,B,C,D,E,F,G,H 2 1 B,E,F,H 3 1,2 A,C,D,G 4 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+5/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 40.635 70.381885 202.084167 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 159 A ASP 159 1_555 C MN MN . A MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc2 C MN MN . A MN 199 1_555 G O HOH . A HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc3 B OD1 ASP 159 B ASP 159 1_555 E MN MN . B MN 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc4 E MN MN . B MN 199 1_555 H O HOH . B HOH 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3C3S _atom_sites.fract_transf_matrix[1][1] 0.012305 _atom_sites.fract_transf_matrix[1][2] 0.007104 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 199 199 MN MN2 . D 3 SO4 A 1 402 402 SO4 SO4 . E 2 MN B 1 199 199 MN MN2 . F 3 SO4 B 1 401 401 SO4 SO4 . G 4 HOH A 1 202 202 HOH HOH . G 4 HOH A 2 205 205 HOH HOH . G 4 HOH A 3 208 208 HOH HOH . G 4 HOH A 4 209 209 HOH HOH . G 4 HOH A 5 212 212 HOH HOH . G 4 HOH A 6 213 213 HOH HOH . G 4 HOH A 7 214 214 HOH HOH . G 4 HOH A 8 215 215 HOH HOH . G 4 HOH A 9 216 216 HOH HOH . G 4 HOH A 10 219 219 HOH HOH . G 4 HOH A 11 220 220 HOH HOH . G 4 HOH A 12 226 226 HOH HOH . G 4 HOH A 13 227 227 HOH HOH . G 4 HOH A 14 232 232 HOH HOH . G 4 HOH A 15 233 233 HOH HOH . G 4 HOH A 16 234 234 HOH HOH . G 4 HOH A 17 237 237 HOH HOH . G 4 HOH A 18 239 239 HOH HOH . G 4 HOH A 19 242 242 HOH HOH . G 4 HOH A 20 244 244 HOH HOH . G 4 HOH A 21 245 245 HOH HOH . G 4 HOH A 22 247 247 HOH HOH . G 4 HOH A 23 250 250 HOH HOH . G 4 HOH A 24 251 251 HOH HOH . G 4 HOH A 25 254 254 HOH HOH . G 4 HOH A 26 255 255 HOH HOH . G 4 HOH A 27 257 257 HOH HOH . G 4 HOH A 28 259 259 HOH HOH . G 4 HOH A 29 260 260 HOH HOH . G 4 HOH A 30 261 261 HOH HOH . G 4 HOH A 31 262 262 HOH HOH . G 4 HOH A 32 266 266 HOH HOH . G 4 HOH A 33 272 272 HOH HOH . G 4 HOH A 34 273 273 HOH HOH . G 4 HOH A 35 274 274 HOH HOH . G 4 HOH A 36 275 275 HOH HOH . G 4 HOH A 37 277 277 HOH HOH . G 4 HOH A 38 280 280 HOH HOH . G 4 HOH A 39 281 281 HOH HOH . G 4 HOH A 40 282 282 HOH HOH . G 4 HOH A 41 283 283 HOH HOH . G 4 HOH A 42 285 285 HOH HOH . G 4 HOH A 43 292 292 HOH HOH . G 4 HOH A 44 302 302 HOH HOH . G 4 HOH A 45 303 303 HOH HOH . G 4 HOH A 46 320 320 HOH HOH . G 4 HOH A 47 322 322 HOH HOH . G 4 HOH A 48 330 330 HOH HOH . G 4 HOH A 49 334 334 HOH HOH . G 4 HOH A 50 335 335 HOH HOH . G 4 HOH A 51 336 336 HOH HOH . G 4 HOH A 52 338 338 HOH HOH . H 4 HOH B 1 201 201 HOH HOH . H 4 HOH B 2 204 204 HOH HOH . H 4 HOH B 3 206 206 HOH HOH . H 4 HOH B 4 210 210 HOH HOH . H 4 HOH B 5 211 211 HOH HOH . H 4 HOH B 6 217 217 HOH HOH . H 4 HOH B 7 218 218 HOH HOH . H 4 HOH B 8 221 221 HOH HOH . H 4 HOH B 9 222 222 HOH HOH . H 4 HOH B 10 223 223 HOH HOH . H 4 HOH B 11 224 224 HOH HOH . H 4 HOH B 12 225 225 HOH HOH . H 4 HOH B 13 228 228 HOH HOH . H 4 HOH B 14 229 229 HOH HOH . H 4 HOH B 15 230 230 HOH HOH . H 4 HOH B 16 231 231 HOH HOH . H 4 HOH B 17 235 235 HOH HOH . H 4 HOH B 18 236 236 HOH HOH . H 4 HOH B 19 238 238 HOH HOH . H 4 HOH B 20 241 241 HOH HOH . H 4 HOH B 21 243 243 HOH HOH . H 4 HOH B 22 246 246 HOH HOH . H 4 HOH B 23 248 248 HOH HOH . H 4 HOH B 24 249 249 HOH HOH . H 4 HOH B 25 252 252 HOH HOH . H 4 HOH B 26 253 253 HOH HOH . H 4 HOH B 27 256 256 HOH HOH . H 4 HOH B 28 258 258 HOH HOH . H 4 HOH B 29 264 264 HOH HOH . H 4 HOH B 30 265 265 HOH HOH . H 4 HOH B 31 267 267 HOH HOH . H 4 HOH B 32 268 268 HOH HOH . H 4 HOH B 33 269 269 HOH HOH . H 4 HOH B 34 270 270 HOH HOH . H 4 HOH B 35 271 271 HOH HOH . H 4 HOH B 36 276 276 HOH HOH . H 4 HOH B 37 279 279 HOH HOH . H 4 HOH B 38 289 289 HOH HOH . H 4 HOH B 39 291 291 HOH HOH . H 4 HOH B 40 296 296 HOH HOH . H 4 HOH B 41 300 300 HOH HOH . H 4 HOH B 42 315 315 HOH HOH . H 4 HOH B 43 316 316 HOH HOH . H 4 HOH B 44 317 317 HOH HOH . H 4 HOH B 45 318 318 HOH HOH . H 4 HOH B 46 326 326 HOH HOH . H 4 HOH B 47 329 329 HOH HOH . H 4 HOH B 48 331 331 HOH HOH . H 4 HOH B 49 332 332 HOH HOH . H 4 HOH B 50 333 333 HOH HOH . H 4 HOH B 51 337 337 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.945 _atom_site.Cartn_y 36.3 _atom_site.Cartn_z 92.48 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 199 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #