data_3C4H
#
_model_server_result.job_id            QrNar6-n0KBqptY6exoQdQ 
_model_server_result.datetime_utc      '2024-11-23 16:36:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3c4h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    3C4H 
#
_exptl.entry_id    3C4H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              182.243 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-methyl-3,5,7,8-tetrahydro-4H-thiopyrano[4,3-d]pyrimidin-4-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.36 
_cell.angle_gamma         90 
_cell.entry_id            3C4H 
_cell.length_a            54.91 
_cell.length_b            57.33 
_cell.length_c            56.26 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3C4H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C8 H10 N2 O S' 
_chem_comp.formula_weight    182.243 
_chem_comp.id                DRL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-methyl-3,5,7,8-tetrahydro-4H-thiopyrano[4,3-d]pyrimidin-4-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1A C1I DRL sing 92 n n 
C1I N1G DRL doub 93 n n 
C1I N1F DRL sing 94 n n 
N1G C1J DRL sing 95 n n 
C1J C1D DRL sing 96 n n 
C1J C1K DRL doub 97 n n 
C1D C1C DRL sing 98 n n 
C1C S1H DRL sing 99 n n 
S1H C1E DRL sing 100 n n 
C1E C1K DRL sing 101 n n 
C1K C1L DRL sing 102 n n 
C1L O1B DRL doub 103 n n 
C1L N1F DRL sing 104 n n 
C1A H1A DRL sing 105 n n 
C1A H1AA DRL sing 106 n n 
C1A H1AB DRL sing 107 n n 
C1D H1D DRL sing 108 n n 
C1D H1DA DRL sing 109 n n 
C1C H1C DRL sing 110 n n 
C1C H1CA DRL sing 111 n n 
C1E H1E DRL sing 112 n n 
C1E H1EA DRL sing 113 n n 
N1F HN1F DRL sing 114 n n 
#
_atom_sites.entry_id                     3C4H 
_atom_sites.fract_transf_matrix[1][1]    0.018212 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007491 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017443 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01922 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DRL A 1 601 1 DRL DRL . 
C 3 DMS A 1 700 1 DMS DMS . 
D 4 HOH A 1 701 1 HOH HOH . 
D 4 HOH A 2 702 2 HOH HOH . 
D 4 HOH A 3 703 3 HOH HOH . 
D 4 HOH A 4 704 4 HOH HOH . 
D 4 HOH A 5 705 5 HOH HOH . 
D 4 HOH A 6 706 6 HOH HOH . 
D 4 HOH A 7 707 7 HOH HOH . 
D 4 HOH A 8 708 8 HOH HOH . 
D 4 HOH A 9 709 9 HOH HOH . 
D 4 HOH A 10 710 10 HOH HOH . 
D 4 HOH A 11 711 11 HOH HOH . 
D 4 HOH A 12 712 12 HOH HOH . 
D 4 HOH A 13 713 13 HOH HOH . 
D 4 HOH A 14 714 14 HOH HOH . 
D 4 HOH A 15 715 15 HOH HOH . 
D 4 HOH A 16 716 16 HOH HOH . 
D 4 HOH A 17 717 17 HOH HOH . 
D 4 HOH A 18 718 18 HOH HOH . 
D 4 HOH A 19 719 19 HOH HOH . 
D 4 HOH A 20 720 20 HOH HOH . 
D 4 HOH A 21 721 21 HOH HOH . 
D 4 HOH A 22 722 22 HOH HOH . 
D 4 HOH A 23 723 23 HOH HOH . 
D 4 HOH A 24 724 24 HOH HOH . 
D 4 HOH A 25 725 25 HOH HOH . 
D 4 HOH A 26 726 26 HOH HOH . 
D 4 HOH A 27 727 27 HOH HOH . 
D 4 HOH A 28 728 28 HOH HOH . 
D 4 HOH A 29 729 29 HOH HOH . 
D 4 HOH A 30 730 30 HOH HOH . 
D 4 HOH A 31 731 31 HOH HOH . 
D 4 HOH A 32 732 32 HOH HOH . 
D 4 HOH A 33 733 33 HOH HOH . 
D 4 HOH A 34 734 34 HOH HOH . 
D 4 HOH A 35 735 35 HOH HOH . 
D 4 HOH A 36 736 36 HOH HOH . 
D 4 HOH A 37 737 37 HOH HOH . 
D 4 HOH A 38 738 38 HOH HOH . 
D 4 HOH A 39 739 39 HOH HOH . 
D 4 HOH A 40 740 40 HOH HOH . 
D 4 HOH A 41 741 41 HOH HOH . 
D 4 HOH A 42 742 43 HOH HOH . 
D 4 HOH A 43 743 44 HOH HOH . 
D 4 HOH A 44 744 45 HOH HOH . 
D 4 HOH A 45 745 46 HOH HOH . 
D 4 HOH A 46 746 47 HOH HOH . 
D 4 HOH A 47 747 48 HOH HOH . 
D 4 HOH A 48 748 49 HOH HOH . 
D 4 HOH A 49 749 50 HOH HOH . 
D 4 HOH A 50 750 51 HOH HOH . 
D 4 HOH A 51 751 52 HOH HOH . 
D 4 HOH A 52 752 53 HOH HOH . 
D 4 HOH A 53 753 54 HOH HOH . 
D 4 HOH A 54 754 55 HOH HOH . 
D 4 HOH A 55 755 56 HOH HOH . 
D 4 HOH A 56 756 57 HOH HOH . 
D 4 HOH A 57 757 58 HOH HOH . 
D 4 HOH A 58 758 59 HOH HOH . 
D 4 HOH A 59 759 60 HOH HOH . 
D 4 HOH A 60 760 61 HOH HOH . 
D 4 HOH A 61 761 62 HOH HOH . 
D 4 HOH A 62 762 63 HOH HOH . 
D 4 HOH A 63 763 64 HOH HOH . 
D 4 HOH A 64 764 65 HOH HOH . 
D 4 HOH A 65 765 66 HOH HOH . 
D 4 HOH A 66 766 67 HOH HOH . 
D 4 HOH A 67 767 68 HOH HOH . 
D 4 HOH A 68 768 69 HOH HOH . 
D 4 HOH A 69 769 70 HOH HOH . 
D 4 HOH A 70 770 71 HOH HOH . 
D 4 HOH A 71 771 72 HOH HOH . 
D 4 HOH A 72 772 73 HOH HOH . 
D 4 HOH A 73 773 74 HOH HOH . 
D 4 HOH A 74 774 75 HOH HOH . 
D 4 HOH A 75 775 76 HOH HOH . 
D 4 HOH A 76 776 77 HOH HOH . 
D 4 HOH A 77 777 78 HOH HOH . 
D 4 HOH A 78 778 79 HOH HOH . 
D 4 HOH A 79 779 80 HOH HOH . 
D 4 HOH A 80 780 81 HOH HOH . 
D 4 HOH A 81 781 82 HOH HOH . 
D 4 HOH A 82 782 83 HOH HOH . 
D 4 HOH A 83 783 84 HOH HOH . 
D 4 HOH A 84 784 85 HOH HOH . 
D 4 HOH A 85 785 86 HOH HOH . 
D 4 HOH A 86 786 87 HOH HOH . 
D 4 HOH A 87 787 88 HOH HOH . 
D 4 HOH A 88 788 89 HOH HOH . 
D 4 HOH A 89 789 90 HOH HOH . 
D 4 HOH A 90 790 91 HOH HOH . 
D 4 HOH A 91 791 92 HOH HOH . 
D 4 HOH A 92 792 93 HOH HOH . 
D 4 HOH A 93 793 94 HOH HOH . 
D 4 HOH A 94 794 95 HOH HOH . 
D 4 HOH A 95 795 96 HOH HOH . 
D 4 HOH A 96 796 97 HOH HOH . 
D 4 HOH A 97 797 98 HOH HOH . 
D 4 HOH A 98 798 99 HOH HOH . 
D 4 HOH A 99 799 100 HOH HOH . 
D 4 HOH A 100 800 101 HOH HOH . 
D 4 HOH A 101 801 102 HOH HOH . 
D 4 HOH A 102 802 103 HOH HOH . 
D 4 HOH A 103 803 104 HOH HOH . 
D 4 HOH A 104 804 105 HOH HOH . 
D 4 HOH A 105 805 106 HOH HOH . 
D 4 HOH A 106 806 107 HOH HOH . 
D 4 HOH A 107 807 108 HOH HOH . 
D 4 HOH A 108 808 109 HOH HOH . 
D 4 HOH A 109 809 110 HOH HOH . 
D 4 HOH A 110 810 111 HOH HOH . 
D 4 HOH A 111 811 112 HOH HOH . 
D 4 HOH A 112 812 113 HOH HOH . 
D 4 HOH A 113 813 114 HOH HOH . 
D 4 HOH A 114 814 115 HOH HOH . 
D 4 HOH A 115 815 116 HOH HOH . 
D 4 HOH A 116 816 117 HOH HOH . 
D 4 HOH A 117 817 118 HOH HOH . 
D 4 HOH A 118 818 119 HOH HOH . 
D 4 HOH A 119 819 120 HOH HOH . 
D 4 HOH A 120 820 122 HOH HOH . 
D 4 HOH A 121 821 123 HOH HOH . 
D 4 HOH A 122 822 124 HOH HOH . 
D 4 HOH A 123 823 125 HOH HOH . 
D 4 HOH A 124 824 126 HOH HOH . 
D 4 HOH A 125 825 127 HOH HOH . 
D 4 HOH A 126 826 128 HOH HOH . 
D 4 HOH A 127 827 129 HOH HOH . 
D 4 HOH A 128 828 130 HOH HOH . 
D 4 HOH A 129 829 131 HOH HOH . 
D 4 HOH A 130 830 132 HOH HOH . 
D 4 HOH A 131 831 133 HOH HOH . 
D 4 HOH A 132 832 134 HOH HOH . 
D 4 HOH A 133 833 135 HOH HOH . 
D 4 HOH A 134 834 136 HOH HOH . 
D 4 HOH A 135 835 137 HOH HOH . 
D 4 HOH A 136 836 138 HOH HOH . 
D 4 HOH A 137 837 139 HOH HOH . 
D 4 HOH A 138 838 140 HOH HOH . 
D 4 HOH A 139 839 142 HOH HOH . 
D 4 HOH A 140 840 143 HOH HOH . 
D 4 HOH A 141 841 144 HOH HOH . 
D 4 HOH A 142 842 145 HOH HOH . 
D 4 HOH A 143 843 146 HOH HOH . 
D 4 HOH A 144 844 147 HOH HOH . 
D 4 HOH A 145 845 148 HOH HOH . 
D 4 HOH A 146 846 149 HOH HOH . 
D 4 HOH A 147 847 150 HOH HOH . 
D 4 HOH A 148 848 151 HOH HOH . 
D 4 HOH A 149 849 152 HOH HOH . 
D 4 HOH A 150 850 153 HOH HOH . 
D 4 HOH A 151 851 154 HOH HOH . 
D 4 HOH A 152 852 155 HOH HOH . 
D 4 HOH A 153 853 156 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1A DRL . . . B 2 18.857 -4.579 12.977 1 14.07 ? C1A DRL 601 A 1 
HETATM 2 C C1I DRL . . . B 2 17.911 -5.595 12.324 1 15.67 ? C1I DRL 601 A 1 
HETATM 3 N N1G DRL . . . B 2 18.325 -6.828 12.019 1 16.41 ? N1G DRL 601 A 1 
HETATM 4 C C1J DRL . . . B 2 17.534 -7.752 11.442 1 15.62 ? C1J DRL 601 A 1 
HETATM 5 C C1D DRL . . . B 2 18.241 -9.1 11.224 1 14.78 ? C1D DRL 601 A 1 
HETATM 6 C C1C DRL . . . B 2 17.268 -10.261 10.991 1 14 ? C1C DRL 601 A 1 
HETATM 7 S S1H DRL . . . B 2 16.137 -9.817 9.64 1 14.81 ? S1H DRL 601 A 1 
HETATM 8 C C1E DRL . . . B 2 15.241 -8.456 10.485 1 14.14 ? C1E DRL 601 A 1 
HETATM 9 C C1K DRL . . . B 2 16.198 -7.447 11.136 1 14.99 ? C1K DRL 601 A 1 
HETATM 10 C C1L DRL . . . B 2 15.759 -6.158 11.446 1 15.02 ? C1L DRL 601 A 1 
HETATM 11 O O1B DRL . . . B 2 14.607 -5.798 11.211 1 13 ? O1B DRL 601 A 1 
HETATM 12 N N1F DRL . . . B 2 16.604 -5.245 12.051 1 13.55 ? N1F DRL 601 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           214 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           12 
#