data_3C4W # _model_server_result.job_id WfO0tGrtGMYzwR6G2BZP1Q _model_server_result.datetime_utc '2024-11-24 11:38:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c4w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":563}' # _entry.id 3C4W # _exptl.entry_id 3C4W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.82 _cell.angle_gamma 90 _cell.entry_id 3C4W _cell.length_a 202.889 _cell.length_b 55.054 _cell.length_c 122.699 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C4W _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GLU 7 B GLU 7 1_555 B N TPO 8 B TPO 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 B C TPO 8 B TPO 8 1_555 B N VAL 9 B VAL 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? metalc ? metalc1 A OD1 ASP 332 A ASP 332 1_555 C MG MG . A MG 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc2 G O1G ATP . A ATP 562 1_555 C MG MG . A MG 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc3 G O2B ATP . A ATP 562 1_555 C MG MG . A MG 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc4 C MG MG . A MG 564 1_555 K O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc5 C MG MG . A MG 564 1_555 K O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc6 C MG MG . A MG 564 1_555 K O HOH . A HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? metalc ? metalc7 B OD1 ASN 319 B ASN 319 1_555 H MG MG . B MG 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc8 B OD2 ASP 332 B ASP 332 1_555 H MG MG . B MG 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc9 B OD1 ASP 332 B ASP 332 1_555 I MG MG . B MG 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc10 J O2A ATP . B ATP 562 1_555 H MG MG . B MG 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc11 J O2B ATP . B ATP 562 1_555 I MG MG . B MG 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3C4W _atom_sites.fract_transf_matrix[1][1] 0.004929 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000942 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008297 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 564 564 MG MG . D 3 CL A 1 565 565 CL CL . E 3 CL A 1 566 566 CL CL . F 3 CL A 1 567 565 CL CL . G 4 ATP A 1 562 562 ATP ATP . H 2 MG B 1 563 563 MG MG . I 2 MG B 1 564 564 MG MG . J 4 ATP B 1 562 562 ATP ATP . K 5 HOH A 1 568 2 HOH HOH . K 5 HOH A 2 569 6 HOH HOH . K 5 HOH A 3 570 8 HOH HOH . K 5 HOH A 4 571 9 HOH HOH . K 5 HOH A 5 572 11 HOH HOH . K 5 HOH A 6 573 14 HOH HOH . K 5 HOH A 7 574 15 HOH HOH . K 5 HOH A 8 575 16 HOH HOH . K 5 HOH A 9 576 17 HOH HOH . K 5 HOH A 10 577 18 HOH HOH . K 5 HOH A 11 578 19 HOH HOH . K 5 HOH A 12 579 21 HOH HOH . K 5 HOH A 13 580 26 HOH HOH . K 5 HOH A 14 581 28 HOH HOH . K 5 HOH A 15 582 29 HOH HOH . K 5 HOH A 16 583 31 HOH HOH . K 5 HOH A 17 584 32 HOH HOH . K 5 HOH A 18 585 33 HOH HOH . K 5 HOH A 19 586 34 HOH HOH . K 5 HOH A 20 587 35 HOH HOH . K 5 HOH A 21 588 37 HOH HOH . K 5 HOH A 22 589 39 HOH HOH . K 5 HOH A 23 590 40 HOH HOH . K 5 HOH A 24 591 41 HOH HOH . K 5 HOH A 25 592 43 HOH HOH . K 5 HOH A 26 593 81 HOH HOH . K 5 HOH A 27 594 82 HOH HOH . K 5 HOH A 28 595 84 HOH HOH . K 5 HOH A 29 596 85 HOH HOH . K 5 HOH A 30 597 86 HOH HOH . K 5 HOH A 31 598 88 HOH HOH . K 5 HOH A 32 599 102 HOH HOH . K 5 HOH A 33 600 103 HOH HOH . K 5 HOH A 34 601 104 HOH HOH . K 5 HOH A 35 602 105 HOH HOH . K 5 HOH A 36 603 106 HOH HOH . K 5 HOH A 37 604 107 HOH HOH . K 5 HOH A 38 605 108 HOH HOH . K 5 HOH A 39 606 109 HOH HOH . K 5 HOH A 40 607 110 HOH HOH . K 5 HOH A 41 608 111 HOH HOH . K 5 HOH A 42 609 112 HOH HOH . K 5 HOH A 43 610 113 HOH HOH . K 5 HOH A 44 611 114 HOH HOH . K 5 HOH A 45 612 115 HOH HOH . K 5 HOH A 46 613 116 HOH HOH . K 5 HOH A 47 614 117 HOH HOH . K 5 HOH A 48 615 118 HOH HOH . K 5 HOH A 49 616 119 HOH HOH . K 5 HOH A 50 617 121 HOH HOH . K 5 HOH A 51 618 123 HOH HOH . K 5 HOH A 52 619 124 HOH HOH . K 5 HOH A 53 620 155 HOH HOH . K 5 HOH A 54 621 156 HOH HOH . K 5 HOH A 55 622 157 HOH HOH . K 5 HOH A 56 623 159 HOH HOH . K 5 HOH A 57 624 160 HOH HOH . K 5 HOH A 58 625 162 HOH HOH . K 5 HOH A 59 626 168 HOH HOH . K 5 HOH A 60 627 181 HOH HOH . K 5 HOH A 61 628 185 HOH HOH . K 5 HOH A 62 629 187 HOH HOH . K 5 HOH A 63 630 188 HOH HOH . K 5 HOH A 64 631 190 HOH HOH . K 5 HOH A 65 632 192 HOH HOH . K 5 HOH A 66 633 193 HOH HOH . K 5 HOH A 67 634 194 HOH HOH . K 5 HOH A 68 635 195 HOH HOH . K 5 HOH A 69 636 196 HOH HOH . K 5 HOH A 70 637 197 HOH HOH . K 5 HOH A 71 638 198 HOH HOH . K 5 HOH A 72 639 199 HOH HOH . K 5 HOH A 73 640 200 HOH HOH . K 5 HOH A 74 641 201 HOH HOH . K 5 HOH A 75 642 202 HOH HOH . K 5 HOH A 76 643 204 HOH HOH . K 5 HOH A 77 644 205 HOH HOH . K 5 HOH A 78 645 206 HOH HOH . K 5 HOH A 79 646 230 HOH HOH . K 5 HOH A 80 647 234 HOH HOH . K 5 HOH A 81 648 235 HOH HOH . K 5 HOH A 82 649 236 HOH HOH . K 5 HOH A 83 650 237 HOH HOH . K 5 HOH A 84 651 239 HOH HOH . K 5 HOH A 85 652 242 HOH HOH . K 5 HOH A 86 653 243 HOH HOH . K 5 HOH A 87 654 244 HOH HOH . K 5 HOH A 88 655 245 HOH HOH . K 5 HOH A 89 656 246 HOH HOH . K 5 HOH A 90 657 247 HOH HOH . K 5 HOH A 91 658 248 HOH HOH . K 5 HOH A 92 659 250 HOH HOH . K 5 HOH A 93 660 252 HOH HOH . K 5 HOH A 94 661 254 HOH HOH . K 5 HOH A 95 662 255 HOH HOH . K 5 HOH A 96 663 256 HOH HOH . K 5 HOH A 97 664 257 HOH HOH . K 5 HOH A 98 665 259 HOH HOH . K 5 HOH A 99 666 260 HOH HOH . K 5 HOH A 100 667 261 HOH HOH . K 5 HOH A 101 668 262 HOH HOH . K 5 HOH A 102 669 275 HOH HOH . K 5 HOH A 103 670 280 HOH HOH . K 5 HOH A 104 671 282 HOH HOH . K 5 HOH A 105 672 283 HOH HOH . K 5 HOH A 106 673 284 HOH HOH . K 5 HOH A 107 674 292 HOH HOH . K 5 HOH A 108 675 294 HOH HOH . K 5 HOH A 109 676 297 HOH HOH . L 5 HOH B 1 565 44 HOH HOH . L 5 HOH B 2 566 47 HOH HOH . L 5 HOH B 3 567 51 HOH HOH . L 5 HOH B 4 568 52 HOH HOH . L 5 HOH B 5 569 55 HOH HOH . L 5 HOH B 6 570 56 HOH HOH . L 5 HOH B 7 571 58 HOH HOH . L 5 HOH B 8 572 61 HOH HOH . L 5 HOH B 9 573 63 HOH HOH . L 5 HOH B 10 574 64 HOH HOH . L 5 HOH B 11 575 67 HOH HOH . L 5 HOH B 12 576 69 HOH HOH . L 5 HOH B 13 577 71 HOH HOH . L 5 HOH B 14 578 74 HOH HOH . L 5 HOH B 15 579 75 HOH HOH . L 5 HOH B 16 580 76 HOH HOH . L 5 HOH B 17 581 78 HOH HOH . L 5 HOH B 18 582 79 HOH HOH . L 5 HOH B 19 583 100 HOH HOH . L 5 HOH B 20 584 101 HOH HOH . L 5 HOH B 21 585 126 HOH HOH . L 5 HOH B 22 586 130 HOH HOH . L 5 HOH B 23 587 132 HOH HOH . L 5 HOH B 24 588 134 HOH HOH . L 5 HOH B 25 589 135 HOH HOH . L 5 HOH B 26 590 136 HOH HOH . L 5 HOH B 27 591 137 HOH HOH . L 5 HOH B 28 592 138 HOH HOH . L 5 HOH B 29 593 141 HOH HOH . L 5 HOH B 30 594 142 HOH HOH . L 5 HOH B 31 595 143 HOH HOH . L 5 HOH B 32 596 144 HOH HOH . L 5 HOH B 33 597 145 HOH HOH . L 5 HOH B 34 598 146 HOH HOH . L 5 HOH B 35 599 147 HOH HOH . L 5 HOH B 36 600 148 HOH HOH . L 5 HOH B 37 601 150 HOH HOH . L 5 HOH B 38 602 163 HOH HOH . L 5 HOH B 39 603 166 HOH HOH . L 5 HOH B 40 604 169 HOH HOH . L 5 HOH B 41 605 207 HOH HOH . L 5 HOH B 42 606 209 HOH HOH . L 5 HOH B 43 607 210 HOH HOH . L 5 HOH B 44 608 212 HOH HOH . L 5 HOH B 45 609 213 HOH HOH . L 5 HOH B 46 610 214 HOH HOH . L 5 HOH B 47 611 215 HOH HOH . L 5 HOH B 48 612 216 HOH HOH . L 5 HOH B 49 613 268 HOH HOH . L 5 HOH B 50 614 269 HOH HOH . L 5 HOH B 51 615 271 HOH HOH . L 5 HOH B 52 616 272 HOH HOH . L 5 HOH B 53 617 276 HOH HOH . L 5 HOH B 54 618 277 HOH HOH . L 5 HOH B 55 619 281 HOH HOH . L 5 HOH B 56 620 286 HOH HOH . L 5 HOH B 57 621 287 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x -111.422 _atom_site.Cartn_y 55.272 _atom_site.Cartn_z -51.21 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 563 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #