data_3C4X # _model_server_result.job_id o2JBsLI0FDg0TrMofVyH7g _model_server_result.datetime_utc '2024-11-28 06:10:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c4x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":564}' # _entry.id 3C4X # _exptl.entry_id 3C4X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3C4X _cell.length_a 54.116 _cell.length_b 95.122 _cell.length_c 234.823 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C4X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F O1G ATP . A ATP 562 1_555 C MG MG . A MG 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc2 F O2B ATP . A ATP 562 1_555 C MG MG . A MG 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc3 C MG MG . A MG 564 1_555 I O HOH . A HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc4 C MG MG . A MG 564 1_555 I O HOH . A HOH 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc5 B OD1 ASN 319 B ASN 319 1_555 G MG MG . B MG 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc6 H O2A ATP . B ATP 562 1_555 G MG MG . B MG 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3C4X _atom_sites.fract_transf_matrix[1][1] 0.018479 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010513 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 564 564 MG MG . D 3 CL A 1 565 565 CL CL . E 3 CL A 1 566 566 CL CL . F 4 ATP A 1 562 562 ATP ATP . G 2 MG B 1 563 563 MG MG . H 4 ATP B 1 562 562 ATP ATP . I 5 HOH A 1 567 2 HOH HOH . I 5 HOH A 2 568 3 HOH HOH . I 5 HOH A 3 569 5 HOH HOH . I 5 HOH A 4 570 8 HOH HOH . I 5 HOH A 5 571 9 HOH HOH . I 5 HOH A 6 572 10 HOH HOH . I 5 HOH A 7 573 11 HOH HOH . I 5 HOH A 8 574 12 HOH HOH . I 5 HOH A 9 575 13 HOH HOH . I 5 HOH A 10 576 14 HOH HOH . I 5 HOH A 11 577 15 HOH HOH . I 5 HOH A 12 578 16 HOH HOH . I 5 HOH A 13 579 17 HOH HOH . I 5 HOH A 14 580 18 HOH HOH . I 5 HOH A 15 581 19 HOH HOH . I 5 HOH A 16 582 20 HOH HOH . I 5 HOH A 17 583 22 HOH HOH . I 5 HOH A 18 584 23 HOH HOH . I 5 HOH A 19 585 24 HOH HOH . I 5 HOH A 20 586 25 HOH HOH . I 5 HOH A 21 587 26 HOH HOH . I 5 HOH A 22 588 28 HOH HOH . I 5 HOH A 23 589 29 HOH HOH . I 5 HOH A 24 590 30 HOH HOH . I 5 HOH A 25 591 31 HOH HOH . I 5 HOH A 26 592 32 HOH HOH . I 5 HOH A 27 593 33 HOH HOH . I 5 HOH A 28 594 34 HOH HOH . I 5 HOH A 29 595 35 HOH HOH . I 5 HOH A 30 596 36 HOH HOH . I 5 HOH A 31 597 37 HOH HOH . I 5 HOH A 32 598 38 HOH HOH . I 5 HOH A 33 599 42 HOH HOH . I 5 HOH A 34 600 43 HOH HOH . I 5 HOH A 35 601 44 HOH HOH . I 5 HOH A 36 602 45 HOH HOH . I 5 HOH A 37 603 46 HOH HOH . I 5 HOH A 38 604 49 HOH HOH . I 5 HOH A 39 605 51 HOH HOH . I 5 HOH A 40 606 52 HOH HOH . I 5 HOH A 41 607 53 HOH HOH . I 5 HOH A 42 608 54 HOH HOH . I 5 HOH A 43 609 55 HOH HOH . I 5 HOH A 44 610 56 HOH HOH . I 5 HOH A 45 611 57 HOH HOH . I 5 HOH A 46 612 58 HOH HOH . I 5 HOH A 47 613 63 HOH HOH . I 5 HOH A 48 614 66 HOH HOH . I 5 HOH A 49 615 67 HOH HOH . I 5 HOH A 50 616 68 HOH HOH . I 5 HOH A 51 617 69 HOH HOH . I 5 HOH A 52 618 72 HOH HOH . I 5 HOH A 53 619 73 HOH HOH . J 5 HOH B 1 564 39 HOH HOH . J 5 HOH B 2 565 40 HOH HOH . J 5 HOH B 3 566 47 HOH HOH . J 5 HOH B 4 567 48 HOH HOH . J 5 HOH B 5 568 59 HOH HOH . J 5 HOH B 6 569 61 HOH HOH . J 5 HOH B 7 570 71 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -47.49 _atom_site.Cartn_y -15.967 _atom_site.Cartn_z -2.618 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 564 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #