data_3C66 # _model_server_result.job_id my1uGC2qpJJVUYOo4lVplg _model_server_result.datetime_utc '2024-11-12 20:39:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c66 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":544}' # _entry.id 3C66 # _exptl.entry_id 3C66 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3C66 _cell.length_a 111.124 _cell.length_b 184.211 _cell.length_c 73.534 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C66 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,S,U 1 1 B,D,K,L,M,N,O,P,Q,R,T,V 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3C66 _atom_sites.fract_transf_matrix[1][1] 0.008999 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MES A 1 538 1 MES MES . F 4 GOL A 1 539 3 GOL GOL . G 4 GOL A 1 540 4 GOL GOL . H 4 GOL A 1 541 10 GOL GOL . I 4 GOL A 1 542 11 GOL GOL . J 4 GOL A 1 543 12 GOL GOL . K 3 MES B 1 538 2 MES MES . L 3 MES B 1 539 3 MES MES . M 4 GOL B 1 540 1 GOL GOL . N 4 GOL B 1 541 2 GOL GOL . O 4 GOL B 1 542 5 GOL GOL . P 4 GOL B 1 543 7 GOL GOL . Q 4 GOL B 1 544 8 GOL GOL . R 4 GOL B 1 545 9 GOL GOL . S 5 HOH A 1 544 1 HOH HOH . S 5 HOH A 2 545 2 HOH HOH . S 5 HOH A 3 546 14 HOH HOH . S 5 HOH A 4 547 17 HOH HOH . S 5 HOH A 5 548 18 HOH HOH . S 5 HOH A 6 549 19 HOH HOH . S 5 HOH A 7 550 20 HOH HOH . S 5 HOH A 8 551 21 HOH HOH . S 5 HOH A 9 552 22 HOH HOH . S 5 HOH A 10 553 28 HOH HOH . S 5 HOH A 11 554 29 HOH HOH . S 5 HOH A 12 555 33 HOH HOH . S 5 HOH A 13 556 34 HOH HOH . S 5 HOH A 14 557 35 HOH HOH . S 5 HOH A 15 558 36 HOH HOH . S 5 HOH A 16 559 37 HOH HOH . S 5 HOH A 17 560 38 HOH HOH . S 5 HOH A 18 561 39 HOH HOH . S 5 HOH A 19 562 40 HOH HOH . S 5 HOH A 20 563 41 HOH HOH . S 5 HOH A 21 564 46 HOH HOH . S 5 HOH A 22 565 47 HOH HOH . S 5 HOH A 23 566 48 HOH HOH . S 5 HOH A 24 567 49 HOH HOH . S 5 HOH A 25 568 50 HOH HOH . S 5 HOH A 26 569 51 HOH HOH . S 5 HOH A 27 570 52 HOH HOH . S 5 HOH A 28 571 53 HOH HOH . S 5 HOH A 29 572 56 HOH HOH . S 5 HOH A 30 573 57 HOH HOH . S 5 HOH A 31 574 59 HOH HOH . S 5 HOH A 32 575 60 HOH HOH . S 5 HOH A 33 576 63 HOH HOH . S 5 HOH A 34 577 64 HOH HOH . S 5 HOH A 35 578 65 HOH HOH . S 5 HOH A 36 579 70 HOH HOH . S 5 HOH A 37 580 71 HOH HOH . S 5 HOH A 38 581 72 HOH HOH . S 5 HOH A 39 582 73 HOH HOH . S 5 HOH A 40 583 79 HOH HOH . S 5 HOH A 41 584 80 HOH HOH . S 5 HOH A 42 585 81 HOH HOH . S 5 HOH A 43 586 82 HOH HOH . S 5 HOH A 44 587 83 HOH HOH . S 5 HOH A 45 588 84 HOH HOH . S 5 HOH A 46 589 86 HOH HOH . S 5 HOH A 47 590 87 HOH HOH . S 5 HOH A 48 591 88 HOH HOH . S 5 HOH A 49 592 89 HOH HOH . S 5 HOH A 50 593 92 HOH HOH . S 5 HOH A 51 594 93 HOH HOH . S 5 HOH A 52 595 94 HOH HOH . S 5 HOH A 53 596 98 HOH HOH . S 5 HOH A 54 597 101 HOH HOH . S 5 HOH A 55 598 106 HOH HOH . S 5 HOH A 56 599 107 HOH HOH . S 5 HOH A 57 600 109 HOH HOH . S 5 HOH A 58 601 111 HOH HOH . S 5 HOH A 59 602 115 HOH HOH . S 5 HOH A 60 603 116 HOH HOH . S 5 HOH A 61 604 117 HOH HOH . S 5 HOH A 62 605 124 HOH HOH . S 5 HOH A 63 606 127 HOH HOH . S 5 HOH A 64 607 129 HOH HOH . S 5 HOH A 65 608 131 HOH HOH . S 5 HOH A 66 609 133 HOH HOH . S 5 HOH A 67 610 134 HOH HOH . S 5 HOH A 68 611 135 HOH HOH . S 5 HOH A 69 612 139 HOH HOH . S 5 HOH A 70 613 140 HOH HOH . S 5 HOH A 71 614 141 HOH HOH . S 5 HOH A 72 615 145 HOH HOH . S 5 HOH A 73 616 146 HOH HOH . S 5 HOH A 74 617 149 HOH HOH . S 5 HOH A 75 618 151 HOH HOH . S 5 HOH A 76 619 153 HOH HOH . S 5 HOH A 77 620 156 HOH HOH . S 5 HOH A 78 621 158 HOH HOH . S 5 HOH A 79 622 160 HOH HOH . S 5 HOH A 80 623 161 HOH HOH . S 5 HOH A 81 624 162 HOH HOH . S 5 HOH A 82 625 166 HOH HOH . S 5 HOH A 83 626 168 HOH HOH . S 5 HOH A 84 627 169 HOH HOH . S 5 HOH A 85 628 170 HOH HOH . S 5 HOH A 86 629 171 HOH HOH . S 5 HOH A 87 630 174 HOH HOH . S 5 HOH A 88 631 175 HOH HOH . S 5 HOH A 89 632 178 HOH HOH . S 5 HOH A 90 633 179 HOH HOH . S 5 HOH A 91 634 180 HOH HOH . S 5 HOH A 92 635 181 HOH HOH . S 5 HOH A 93 636 182 HOH HOH . S 5 HOH A 94 637 183 HOH HOH . S 5 HOH A 95 638 188 HOH HOH . S 5 HOH A 96 639 190 HOH HOH . S 5 HOH A 97 640 191 HOH HOH . S 5 HOH A 98 641 195 HOH HOH . S 5 HOH A 99 642 196 HOH HOH . S 5 HOH A 100 643 200 HOH HOH . S 5 HOH A 101 644 202 HOH HOH . S 5 HOH A 102 645 203 HOH HOH . S 5 HOH A 103 646 206 HOH HOH . S 5 HOH A 104 647 210 HOH HOH . S 5 HOH A 105 648 211 HOH HOH . S 5 HOH A 106 649 215 HOH HOH . S 5 HOH A 107 650 217 HOH HOH . S 5 HOH A 108 651 219 HOH HOH . S 5 HOH A 109 652 220 HOH HOH . S 5 HOH A 110 653 221 HOH HOH . T 5 HOH B 1 546 3 HOH HOH . T 5 HOH B 2 547 4 HOH HOH . T 5 HOH B 3 548 5 HOH HOH . T 5 HOH B 4 549 6 HOH HOH . T 5 HOH B 5 550 7 HOH HOH . T 5 HOH B 6 551 8 HOH HOH . T 5 HOH B 7 552 9 HOH HOH . T 5 HOH B 8 553 10 HOH HOH . T 5 HOH B 9 554 15 HOH HOH . T 5 HOH B 10 555 16 HOH HOH . T 5 HOH B 11 556 23 HOH HOH . T 5 HOH B 12 557 24 HOH HOH . T 5 HOH B 13 558 25 HOH HOH . T 5 HOH B 14 559 26 HOH HOH . T 5 HOH B 15 560 27 HOH HOH . T 5 HOH B 16 561 30 HOH HOH . T 5 HOH B 17 562 31 HOH HOH . T 5 HOH B 18 563 32 HOH HOH . T 5 HOH B 19 564 42 HOH HOH . T 5 HOH B 20 565 43 HOH HOH . T 5 HOH B 21 566 44 HOH HOH . T 5 HOH B 22 567 45 HOH HOH . T 5 HOH B 23 568 54 HOH HOH . T 5 HOH B 24 569 55 HOH HOH . T 5 HOH B 25 570 61 HOH HOH . T 5 HOH B 26 571 62 HOH HOH . T 5 HOH B 27 572 67 HOH HOH . T 5 HOH B 28 573 68 HOH HOH . T 5 HOH B 29 574 69 HOH HOH . T 5 HOH B 30 575 74 HOH HOH . T 5 HOH B 31 576 75 HOH HOH . T 5 HOH B 32 577 76 HOH HOH . T 5 HOH B 33 578 77 HOH HOH . T 5 HOH B 34 579 78 HOH HOH . T 5 HOH B 35 580 85 HOH HOH . T 5 HOH B 36 581 90 HOH HOH . T 5 HOH B 37 582 91 HOH HOH . T 5 HOH B 38 583 95 HOH HOH . T 5 HOH B 39 584 96 HOH HOH . T 5 HOH B 40 585 97 HOH HOH . T 5 HOH B 41 586 99 HOH HOH . T 5 HOH B 42 587 100 HOH HOH . T 5 HOH B 43 588 102 HOH HOH . T 5 HOH B 44 589 103 HOH HOH . T 5 HOH B 45 590 104 HOH HOH . T 5 HOH B 46 591 105 HOH HOH . T 5 HOH B 47 592 110 HOH HOH . T 5 HOH B 48 593 112 HOH HOH . T 5 HOH B 49 594 113 HOH HOH . T 5 HOH B 50 595 114 HOH HOH . T 5 HOH B 51 596 118 HOH HOH . T 5 HOH B 52 597 119 HOH HOH . T 5 HOH B 53 598 120 HOH HOH . T 5 HOH B 54 599 121 HOH HOH . T 5 HOH B 55 600 122 HOH HOH . T 5 HOH B 56 601 123 HOH HOH . T 5 HOH B 57 602 125 HOH HOH . T 5 HOH B 58 603 126 HOH HOH . T 5 HOH B 59 604 130 HOH HOH . T 5 HOH B 60 605 132 HOH HOH . T 5 HOH B 61 606 136 HOH HOH . T 5 HOH B 62 607 137 HOH HOH . T 5 HOH B 63 608 138 HOH HOH . T 5 HOH B 64 609 148 HOH HOH . T 5 HOH B 65 610 152 HOH HOH . T 5 HOH B 66 611 154 HOH HOH . T 5 HOH B 67 612 157 HOH HOH . T 5 HOH B 68 613 159 HOH HOH . T 5 HOH B 69 614 163 HOH HOH . T 5 HOH B 70 615 164 HOH HOH . T 5 HOH B 71 616 165 HOH HOH . T 5 HOH B 72 617 167 HOH HOH . T 5 HOH B 73 618 172 HOH HOH . T 5 HOH B 74 619 173 HOH HOH . T 5 HOH B 75 620 176 HOH HOH . T 5 HOH B 76 621 177 HOH HOH . T 5 HOH B 77 622 184 HOH HOH . T 5 HOH B 78 623 185 HOH HOH . T 5 HOH B 79 624 187 HOH HOH . T 5 HOH B 80 625 189 HOH HOH . T 5 HOH B 81 626 194 HOH HOH . T 5 HOH B 82 627 197 HOH HOH . T 5 HOH B 83 628 199 HOH HOH . T 5 HOH B 84 629 201 HOH HOH . T 5 HOH B 85 630 204 HOH HOH . T 5 HOH B 86 631 207 HOH HOH . T 5 HOH B 87 632 209 HOH HOH . T 5 HOH B 88 633 212 HOH HOH . T 5 HOH B 89 634 213 HOH HOH . T 5 HOH B 90 635 214 HOH HOH . T 5 HOH B 91 636 216 HOH HOH . T 5 HOH B 92 637 222 HOH HOH . U 5 HOH C 1 12 12 HOH HOH . U 5 HOH C 2 13 13 HOH HOH . U 5 HOH C 3 128 128 HOH HOH . U 5 HOH C 4 143 143 HOH HOH . U 5 HOH C 5 144 144 HOH HOH . U 5 HOH C 6 192 192 HOH HOH . V 5 HOH D 1 11 11 HOH HOH . V 5 HOH D 2 150 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . Q 4 -26.103 -21.25 -32.634 1 89.69 ? C1 GOL 544 B 1 HETATM 2 O O1 GOL . . . Q 4 -25.387 -20.122 -33.089 1 89.87 ? O1 GOL 544 B 1 HETATM 3 C C2 GOL . . . Q 4 -27.445 -21.415 -33.348 1 88.86 ? C2 GOL 544 B 1 HETATM 4 O O2 GOL . . . Q 4 -28.067 -22.611 -32.912 1 89.07 ? O2 GOL 544 B 1 HETATM 5 C C3 GOL . . . Q 4 -28.343 -20.195 -33.136 1 87.99 ? C3 GOL 544 B 1 HETATM 6 O O3 GOL . . . Q 4 -29.33 -20.409 -32.147 1 86.69 ? O3 GOL 544 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #