data_3C6N # _model_server_result.job_id l10eWurRkIAMZylnn0-1Wg _model_server_result.datetime_utc '2024-12-04 21:45:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1000}' # _entry.id 3C6N # _exptl.entry_id 3C6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 660.035 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.95 _cell.angle_gamma 90 _cell.entry_id 3C6N _cell.length_a 102.51 _cell.length_b 80.661 _cell.length_c 125.071 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IHP sing 210 n n C1 C6 IHP sing 211 n n C1 O11 IHP sing 212 n n C1 H1 IHP sing 213 n n C2 C3 IHP sing 214 n n C2 O12 IHP sing 215 n n C2 H2 IHP sing 216 n n C3 C4 IHP sing 217 n n C3 O13 IHP sing 218 n n C3 H3 IHP sing 219 n n C4 C5 IHP sing 220 n n C4 O14 IHP sing 221 n n C4 H4 IHP sing 222 n n C5 C6 IHP sing 223 n n C5 O15 IHP sing 224 n n C5 H5 IHP sing 225 n n C6 O16 IHP sing 226 n n C6 H6 IHP sing 227 n n O11 P1 IHP sing 228 n n P1 O21 IHP doub 229 n n P1 O31 IHP sing 230 n n P1 O41 IHP sing 231 n n O31 H31 IHP sing 232 n n O41 H41 IHP sing 233 n n O12 P2 IHP sing 234 n n P2 O22 IHP doub 235 n n P2 O32 IHP sing 236 n n P2 O42 IHP sing 237 n n O32 H32 IHP sing 238 n n O42 H42 IHP sing 239 n n O13 P3 IHP sing 240 n n P3 O23 IHP doub 241 n n P3 O33 IHP sing 242 n n P3 O43 IHP sing 243 n n O33 H33 IHP sing 244 n n O43 H43 IHP sing 245 n n O14 P4 IHP sing 246 n n P4 O24 IHP doub 247 n n P4 O34 IHP sing 248 n n P4 O44 IHP sing 249 n n O34 H34 IHP sing 250 n n O44 H44 IHP sing 251 n n O15 P5 IHP sing 252 n n P5 O25 IHP doub 253 n n P5 O35 IHP sing 254 n n P5 O45 IHP sing 255 n n O35 H35 IHP sing 256 n n O45 H45 IHP sing 257 n n O16 P6 IHP sing 258 n n P6 O26 IHP doub 259 n n P6 O36 IHP sing 260 n n P6 O46 IHP sing 261 n n O36 H36 IHP sing 262 n n O46 H46 IHP sing 263 n n # _atom_sites.entry_id 3C6N _atom_sites.fract_transf_matrix[1][1] 0.009755 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002605 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012398 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008276 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IHP B 1 1000 1000 IHP IHP . D 4 2S8 B 1 1001 1001 2S8 2S8 . E 5 HOH A 1 161 161 HOH HOH . E 5 HOH A 2 162 162 HOH HOH . E 5 HOH A 3 163 163 HOH HOH . E 5 HOH A 4 164 164 HOH HOH . E 5 HOH A 5 165 165 HOH HOH . E 5 HOH A 6 166 166 HOH HOH . E 5 HOH A 7 167 167 HOH HOH . E 5 HOH A 8 168 168 HOH HOH . E 5 HOH A 9 169 169 HOH HOH . E 5 HOH A 10 170 170 HOH HOH . E 5 HOH A 11 171 171 HOH HOH . E 5 HOH A 12 172 172 HOH HOH . E 5 HOH A 13 173 173 HOH HOH . E 5 HOH A 14 174 174 HOH HOH . E 5 HOH A 15 176 176 HOH HOH . E 5 HOH A 16 177 177 HOH HOH . F 5 HOH B 1 1002 1002 HOH HOH . F 5 HOH B 2 1003 1003 HOH HOH . F 5 HOH B 3 1004 1004 HOH HOH . F 5 HOH B 4 1005 1005 HOH HOH . F 5 HOH B 5 1006 1006 HOH HOH . F 5 HOH B 6 1007 1007 HOH HOH . F 5 HOH B 7 1008 1008 HOH HOH . F 5 HOH B 8 1009 1009 HOH HOH . F 5 HOH B 9 1010 1010 HOH HOH . F 5 HOH B 10 1011 1011 HOH HOH . F 5 HOH B 11 1012 1012 HOH HOH . F 5 HOH B 12 1013 1013 HOH HOH . F 5 HOH B 13 1014 1014 HOH HOH . F 5 HOH B 14 1015 1015 HOH HOH . F 5 HOH B 15 1016 1016 HOH HOH . F 5 HOH B 16 1017 1017 HOH HOH . F 5 HOH B 17 1018 1018 HOH HOH . F 5 HOH B 18 1019 1019 HOH HOH . F 5 HOH B 19 1020 1020 HOH HOH . F 5 HOH B 20 1021 1021 HOH HOH . F 5 HOH B 21 1022 1022 HOH HOH . F 5 HOH B 22 1023 1023 HOH HOH . F 5 HOH B 23 1024 1024 HOH HOH . F 5 HOH B 24 1025 1025 HOH HOH . F 5 HOH B 25 1026 1026 HOH HOH . F 5 HOH B 26 1027 1027 HOH HOH . F 5 HOH B 27 1028 1028 HOH HOH . F 5 HOH B 28 1029 1029 HOH HOH . F 5 HOH B 29 1030 1030 HOH HOH . F 5 HOH B 30 1031 1031 HOH HOH . F 5 HOH B 31 1032 1032 HOH HOH . F 5 HOH B 32 1033 1033 HOH HOH . F 5 HOH B 33 1034 1034 HOH HOH . F 5 HOH B 34 1035 1035 HOH HOH . F 5 HOH B 35 1036 1036 HOH HOH . F 5 HOH B 36 1037 1037 HOH HOH . F 5 HOH B 37 1038 1038 HOH HOH . F 5 HOH B 38 1039 1039 HOH HOH . F 5 HOH B 39 1040 1040 HOH HOH . F 5 HOH B 40 1041 1041 HOH HOH . F 5 HOH B 41 1042 1042 HOH HOH . F 5 HOH B 42 1043 1043 HOH HOH . F 5 HOH B 43 1044 1044 HOH HOH . F 5 HOH B 44 1045 1045 HOH HOH . F 5 HOH B 45 1046 1046 HOH HOH . F 5 HOH B 46 1047 1047 HOH HOH . F 5 HOH B 47 1048 1048 HOH HOH . F 5 HOH B 48 1049 1049 HOH HOH . F 5 HOH B 49 1050 1050 HOH HOH . F 5 HOH B 50 1051 1051 HOH HOH . F 5 HOH B 51 1052 1052 HOH HOH . F 5 HOH B 52 1053 1053 HOH HOH . F 5 HOH B 53 1055 1055 HOH HOH . F 5 HOH B 54 1056 1056 HOH HOH . F 5 HOH B 55 1057 1057 HOH HOH . F 5 HOH B 56 1058 1058 HOH HOH . F 5 HOH B 57 1059 1059 HOH HOH . F 5 HOH B 58 1060 1060 HOH HOH . F 5 HOH B 59 1061 1061 HOH HOH . F 5 HOH B 60 1062 1062 HOH HOH . F 5 HOH B 61 1063 1063 HOH HOH . F 5 HOH B 62 1064 1064 HOH HOH . F 5 HOH B 63 1065 1065 HOH HOH . F 5 HOH B 64 1066 1066 HOH HOH . F 5 HOH B 65 1067 1067 HOH HOH . F 5 HOH B 66 1068 1068 HOH HOH . F 5 HOH B 67 1069 1069 HOH HOH . F 5 HOH B 68 1070 1070 HOH HOH . F 5 HOH B 69 1071 1071 HOH HOH . F 5 HOH B 70 1072 1072 HOH HOH . F 5 HOH B 71 1073 1073 HOH HOH . F 5 HOH B 72 1074 1074 HOH HOH . F 5 HOH B 73 1075 1075 HOH HOH . F 5 HOH B 74 1076 1076 HOH HOH . F 5 HOH B 75 1077 1077 HOH HOH . F 5 HOH B 76 1078 1078 HOH HOH . F 5 HOH B 77 1079 1079 HOH HOH . F 5 HOH B 78 1080 1080 HOH HOH . F 5 HOH B 79 1081 1081 HOH HOH . F 5 HOH B 80 1082 1082 HOH HOH . F 5 HOH B 81 1083 1083 HOH HOH . F 5 HOH B 82 1084 1084 HOH HOH . F 5 HOH B 83 1085 1085 HOH HOH . F 5 HOH B 84 1086 1086 HOH HOH . F 5 HOH B 85 1087 1087 HOH HOH . F 5 HOH B 86 1088 1088 HOH HOH . F 5 HOH B 87 1089 1089 HOH HOH . F 5 HOH B 88 1090 1090 HOH HOH . F 5 HOH B 89 1091 1091 HOH HOH . F 5 HOH B 90 1092 1092 HOH HOH . F 5 HOH B 91 1093 1093 HOH HOH . F 5 HOH B 92 1094 1094 HOH HOH . F 5 HOH B 93 1095 1095 HOH HOH . F 5 HOH B 94 1096 1096 HOH HOH . F 5 HOH B 95 1097 1097 HOH HOH . F 5 HOH B 96 1098 1098 HOH HOH . F 5 HOH B 97 1099 1099 HOH HOH . F 5 HOH B 98 1100 1100 HOH HOH . F 5 HOH B 99 1101 1101 HOH HOH . F 5 HOH B 100 1102 1102 HOH HOH . F 5 HOH B 101 1103 1103 HOH HOH . F 5 HOH B 102 1104 1104 HOH HOH . F 5 HOH B 103 1105 1105 HOH HOH . F 5 HOH B 104 1106 1106 HOH HOH . F 5 HOH B 105 1107 1107 HOH HOH . F 5 HOH B 106 1108 1108 HOH HOH . F 5 HOH B 107 1109 1109 HOH HOH . F 5 HOH B 108 1110 1110 HOH HOH . F 5 HOH B 109 1111 1111 HOH HOH . F 5 HOH B 110 1112 1112 HOH HOH . F 5 HOH B 111 1113 1113 HOH HOH . F 5 HOH B 112 1114 1114 HOH HOH . F 5 HOH B 113 1115 1115 HOH HOH . F 5 HOH B 114 1116 1116 HOH HOH . F 5 HOH B 115 1117 1117 HOH HOH . F 5 HOH B 116 1118 1118 HOH HOH . F 5 HOH B 117 1119 1119 HOH HOH . F 5 HOH B 118 1120 1120 HOH HOH . F 5 HOH B 119 1121 1121 HOH HOH . F 5 HOH B 120 1122 1122 HOH HOH . F 5 HOH B 121 1123 1123 HOH HOH . F 5 HOH B 122 1124 1124 HOH HOH . F 5 HOH B 123 1125 1125 HOH HOH . F 5 HOH B 124 1126 1126 HOH HOH . F 5 HOH B 125 1127 1127 HOH HOH . F 5 HOH B 126 1128 1128 HOH HOH . F 5 HOH B 127 1129 1129 HOH HOH . F 5 HOH B 128 1130 1130 HOH HOH . F 5 HOH B 129 1131 1131 HOH HOH . F 5 HOH B 130 1132 1132 HOH HOH . F 5 HOH B 131 1133 1133 HOH HOH . F 5 HOH B 132 1134 1134 HOH HOH . F 5 HOH B 133 1135 1135 HOH HOH . F 5 HOH B 134 1136 1136 HOH HOH . F 5 HOH B 135 1137 1137 HOH HOH . F 5 HOH B 136 1138 1138 HOH HOH . F 5 HOH B 137 1139 1139 HOH HOH . F 5 HOH B 138 1140 1140 HOH HOH . F 5 HOH B 139 1141 1141 HOH HOH . F 5 HOH B 140 1142 1142 HOH HOH . F 5 HOH B 141 1143 1143 HOH HOH . F 5 HOH B 142 1144 1144 HOH HOH . F 5 HOH B 143 1145 1145 HOH HOH . F 5 HOH B 144 1146 1146 HOH HOH . F 5 HOH B 145 1147 1147 HOH HOH . F 5 HOH B 146 1148 1148 HOH HOH . F 5 HOH B 147 1149 1149 HOH HOH . F 5 HOH B 148 1150 1150 HOH HOH . F 5 HOH B 149 1151 1151 HOH HOH . F 5 HOH B 150 1152 1152 HOH HOH . F 5 HOH B 151 1154 1154 HOH HOH . F 5 HOH B 152 1155 1155 HOH HOH . F 5 HOH B 153 1156 1156 HOH HOH . F 5 HOH B 154 1157 1157 HOH HOH . F 5 HOH B 155 1158 1158 HOH HOH . F 5 HOH B 156 1159 1159 HOH HOH . F 5 HOH B 157 1160 1160 HOH HOH . F 5 HOH B 158 1161 1161 HOH HOH . F 5 HOH B 159 1162 1162 HOH HOH . F 5 HOH B 160 1163 1163 HOH HOH . F 5 HOH B 161 1164 1164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . C 3 -2.122 0.307 35.784 1 69.81 ? C1 IHP 1000 B 1 HETATM 2 C C2 IHP . . . C 3 -2.378 -0.441 34.496 1 69.1 ? C2 IHP 1000 B 1 HETATM 3 C C3 IHP . . . C 3 -3.047 0.445 33.485 1 71.14 ? C3 IHP 1000 B 1 HETATM 4 C C4 IHP . . . C 3 -2.107 1.556 33.103 1 69.93 ? C4 IHP 1000 B 1 HETATM 5 C C5 IHP . . . C 3 -1.95 2.41 34.332 1 64.3 ? C5 IHP 1000 B 1 HETATM 6 C C6 IHP . . . C 3 -1.431 1.65 35.547 1 81.49 ? C6 IHP 1000 B 1 HETATM 7 O O11 IHP . . . C 3 -1.321 -0.527 36.615 1 91.1 ? O11 IHP 1000 B 1 HETATM 8 P P1 IHP . . . C 3 -2.001 -1.528 37.653 1 66.79 ? P1 IHP 1000 B 1 HETATM 9 O O21 IHP . . . C 3 -1.173 -1.715 38.842 1 76.13 ? O21 IHP 1000 B 1 HETATM 10 O O31 IHP . . . C 3 -3.433 -0.93 37.969 1 59.04 ? O31 IHP 1000 B 1 HETATM 11 O O41 IHP . . . C 3 -2.272 -2.883 36.916 1 55.86 ? O41 IHP 1000 B 1 HETATM 12 O O12 IHP . . . C 3 -1.148 -0.901 33.974 1 89.62 ? O12 IHP 1000 B 1 HETATM 13 P P2 IHP . . . C 3 -0.971 -2.457 33.724 1 71.71 ? P2 IHP 1000 B 1 HETATM 14 O O22 IHP . . . C 3 -0.218 -3.122 34.801 1 72.75 ? O22 IHP 1000 B 1 HETATM 15 O O32 IHP . . . C 3 -2.451 -3.04 33.537 1 62.18 ? O32 IHP 1000 B 1 HETATM 16 O O42 IHP . . . C 3 -0.251 -2.579 32.309 1 58.27 ? O42 IHP 1000 B 1 HETATM 17 O O13 IHP . . . C 3 -3.378 -0.321 32.349 1 84.46 ? O13 IHP 1000 B 1 HETATM 18 P P3 IHP . . . C 3 -4.818 -0.222 31.692 1 67.48 ? P3 IHP 1000 B 1 HETATM 19 O O23 IHP . . . C 3 -5.278 -1.562 31.289 1 72.14 ? O23 IHP 1000 B 1 HETATM 20 O O33 IHP . . . C 3 -4.676 0.81 30.485 1 53 ? O33 IHP 1000 B 1 HETATM 21 O O43 IHP . . . C 3 -5.78 0.486 32.737 1 61.18 ? O43 IHP 1000 B 1 HETATM 22 O O14 IHP . . . C 3 -2.765 2.348 32.125 1 87.05 ? O14 IHP 1000 B 1 HETATM 23 P P4 IHP . . . C 3 -2.073 2.87 30.813 1 64.24 ? P4 IHP 1000 B 1 HETATM 24 O O24 IHP . . . C 3 -2.132 4.325 30.7 1 67.88 ? O24 IHP 1000 B 1 HETATM 25 O O34 IHP . . . C 3 -0.601 2.309 30.776 1 57.29 ? O34 IHP 1000 B 1 HETATM 26 O O44 IHP . . . C 3 -2.865 2.13 29.68 1 61.04 ? O44 IHP 1000 B 1 HETATM 27 O O15 IHP . . . C 3 -1.141 3.533 34.05 1 74.19 ? O15 IHP 1000 B 1 HETATM 28 P P5 IHP . . . C 3 -1.551 4.875 34.719 1 62.08 ? P5 IHP 1000 B 1 HETATM 29 O O25 IHP . . . C 3 -2.002 4.67 36.096 1 63.71 ? O25 IHP 1000 B 1 HETATM 30 O O35 IHP . . . C 3 -2.64 5.495 33.787 1 62.99 ? O35 IHP 1000 B 1 HETATM 31 O O45 IHP . . . C 3 -0.319 5.827 34.602 1 53.79 ? O45 IHP 1000 B 1 HETATM 32 O O16 IHP . . . C 3 -1.634 2.476 36.679 1 80.34 ? O16 IHP 1000 B 1 HETATM 33 P P6 IHP . . . C 3 -0.482 2.529 37.703 1 64.06 ? P6 IHP 1000 B 1 HETATM 34 O O26 IHP . . . C 3 0.555 1.568 37.334 1 50.69 ? O26 IHP 1000 B 1 HETATM 35 O O36 IHP . . . C 3 -1.166 2.255 39.085 1 54.56 ? O36 IHP 1000 B 1 HETATM 36 O O46 IHP . . . C 3 0.008 4.021 37.769 1 53.24 ? O46 IHP 1000 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #