data_3C8R # _model_server_result.job_id jZB0WwdGVwGaA3NzN6LKQA _model_server_result.datetime_utc '2024-11-09 02:30:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c8r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":600}' # _entry.id 3C8R # _exptl.entry_id 3C8R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3C8R _cell.length_a 61.09 _cell.length_b 61.09 _cell.length_c 97.84 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C8R _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 3C8R _atom_sites.fract_transf_matrix[1][1] 0.016369 _atom_sites.fract_transf_matrix[1][2] 0.009451 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010221 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 168 168 CL CL . C 2 CL A 1 173 173 CL CL . D 3 BME A 1 600 600 BME BME . E 4 HOH A 1 601 601 HOH HOH . E 4 HOH A 2 602 602 HOH HOH . E 4 HOH A 3 603 603 HOH HOH . E 4 HOH A 4 604 604 HOH HOH . E 4 HOH A 5 605 605 HOH HOH . E 4 HOH A 6 606 606 HOH HOH . E 4 HOH A 7 607 607 HOH HOH . E 4 HOH A 8 608 608 HOH HOH . E 4 HOH A 9 609 609 HOH HOH . E 4 HOH A 10 610 610 HOH HOH . E 4 HOH A 11 611 611 HOH HOH . E 4 HOH A 12 612 612 HOH HOH . E 4 HOH A 13 613 613 HOH HOH . E 4 HOH A 14 614 614 HOH HOH . E 4 HOH A 15 615 615 HOH HOH . E 4 HOH A 16 616 616 HOH HOH . E 4 HOH A 17 617 617 HOH HOH . E 4 HOH A 18 618 618 HOH HOH . E 4 HOH A 19 619 619 HOH HOH . E 4 HOH A 20 620 620 HOH HOH . E 4 HOH A 21 621 621 HOH HOH . E 4 HOH A 22 622 622 HOH HOH . E 4 HOH A 23 623 623 HOH HOH . E 4 HOH A 24 624 624 HOH HOH . E 4 HOH A 25 625 625 HOH HOH . E 4 HOH A 26 626 626 HOH HOH . E 4 HOH A 27 627 627 HOH HOH . E 4 HOH A 28 628 628 HOH HOH . E 4 HOH A 29 629 629 HOH HOH . E 4 HOH A 30 630 630 HOH HOH . E 4 HOH A 31 631 631 HOH HOH . E 4 HOH A 32 632 632 HOH HOH . E 4 HOH A 33 633 633 HOH HOH . E 4 HOH A 34 634 634 HOH HOH . E 4 HOH A 35 635 635 HOH HOH . E 4 HOH A 36 636 636 HOH HOH . E 4 HOH A 37 637 637 HOH HOH . E 4 HOH A 38 638 638 HOH HOH . E 4 HOH A 39 639 639 HOH HOH . E 4 HOH A 40 640 640 HOH HOH . E 4 HOH A 41 641 641 HOH HOH . E 4 HOH A 42 642 642 HOH HOH . E 4 HOH A 43 643 643 HOH HOH . E 4 HOH A 44 644 644 HOH HOH . E 4 HOH A 45 645 645 HOH HOH . E 4 HOH A 46 646 646 HOH HOH . E 4 HOH A 47 647 647 HOH HOH . E 4 HOH A 48 648 648 HOH HOH . E 4 HOH A 49 649 649 HOH HOH . E 4 HOH A 50 650 650 HOH HOH . E 4 HOH A 51 651 651 HOH HOH . E 4 HOH A 52 652 652 HOH HOH . E 4 HOH A 53 653 653 HOH HOH . E 4 HOH A 54 654 654 HOH HOH . E 4 HOH A 55 655 655 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 33.883 -3.687 12.599 0.5 28.44 ? C1 BME 600 A 1 HETATM 2 C C2 BME . . . D 3 32.439 -3.154 12.335 0.5 36.5 ? C2 BME 600 A 1 HETATM 3 O O1 BME . . . D 3 34.642 -3.814 11.407 0.5 41.03 ? O1 BME 600 A 1 HETATM 4 S S2 BME . . . D 3 31.927 -1.703 13.304 0.5 38.23 ? S2 BME 600 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #