data_3C9R
#
_model_server_result.job_id            J120A1dgoXQZBNJJ0Me_gQ 
_model_server_result.datetime_utc      '2024-10-14 07:28:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3c9r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":307}' 
#
_entry.id    3C9R 
#
_exptl.entry_id    3C9R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3C9R 
_cell.length_a            61.29 
_cell.length_b            67.14 
_cell.length_c            200.7 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3C9R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 70 A CYS 34 1_555 B SG CYS 70 B CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc1 A OD2 ASP 79 A ASP 43 1_555 C MG MG . A MG 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc2 A OD1 ASP 107 A ASP 71 1_555 D MG MG . A MG 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc3 A OD2 ASP 107 A ASP 71 1_555 C MG MG . A MG 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc4 A OD1 ASP 243 A ASP 207 1_555 D MG MG . A MG 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc5 A OD1 ASP 246 A ASP 210 1_555 F MG MG . A MG 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
metalc ? metalc6 B OD2 ASP 63 B ASP 27 1_555 H MG MG . B MG 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
metalc ? metalc7 B OD1 ASP 79 B ASP 43 1_555 J MG MG . B MG 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc8 B OD2 ASP 79 B ASP 43 1_555 I MG MG . B MG 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc9 B OD1 ASP 107 B ASP 71 1_555 H MG MG . B MG 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc10 B OD2 ASP 107 B ASP 71 1_555 I MG MG . B MG 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc11 B OD1 ASP 243 B ASP 207 1_555 H MG MG . B MG 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc12 C MG MG . A MG 309 1_555 L O2G ATP . B ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? 
metalc ? metalc13 D MG MG . A MG 310 1_555 L O2G ATP . B ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc14 D MG MG . A MG 310 1_555 L O2B ATP . B ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? 
metalc ? metalc15 E MG MG . A MG 311 1_555 L O1A ATP . B ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc16 H MG MG . B MG 309 1_555 G O2B ATP . A ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc17 H MG MG . B MG 309 1_555 G O3G ATP . A ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc18 I MG MG . B MG 310 1_555 G O2G ATP . A ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? 
metalc ? metalc19 J MG MG . B MG 311 1_555 G O1A ATP . A ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc20 J MG MG . B MG 311 1_555 G O2G ATP . A ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc21 K MG MG . B MG 312 1_555 G O1G ATP . A ATP 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc22 H MG MG . B MG 309 1_555 M O HOH . A HOH 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3C9R 
_atom_sites.fract_transf_matrix[1][1]    0.016316 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014894 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004983 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 309 309 MG MG . 
D 2 MG A 1 310 310 MG MG . 
E 2 MG A 1 311 311 MG MG . 
F 2 MG A 1 312 312 MG MG . 
G 3 ATP A 1 307 307 ATP ATP . 
H 2 MG B 1 309 309 MG MG . 
I 2 MG B 1 310 310 MG MG . 
J 2 MG B 1 311 311 MG MG . 
K 2 MG B 1 312 312 MG MG . 
L 3 ATP B 1 307 307 ATP ATP . 
M 4 HOH A 1 313 1 HOH TIP . 
M 4 HOH A 2 314 2 HOH TIP . 
M 4 HOH A 3 315 4 HOH TIP . 
M 4 HOH A 4 316 5 HOH TIP . 
M 4 HOH A 5 317 9 HOH TIP . 
M 4 HOH A 6 318 10 HOH TIP . 
M 4 HOH A 7 319 16 HOH TIP . 
M 4 HOH A 8 320 18 HOH TIP . 
M 4 HOH A 9 321 20 HOH TIP . 
M 4 HOH A 10 322 21 HOH TIP . 
M 4 HOH A 11 323 22 HOH TIP . 
M 4 HOH A 12 324 26 HOH TIP . 
M 4 HOH A 13 325 27 HOH TIP . 
M 4 HOH A 14 326 29 HOH TIP . 
M 4 HOH A 15 327 30 HOH TIP . 
M 4 HOH A 16 328 32 HOH TIP . 
M 4 HOH A 17 329 34 HOH TIP . 
M 4 HOH A 18 330 35 HOH TIP . 
M 4 HOH A 19 331 36 HOH TIP . 
M 4 HOH A 20 332 37 HOH TIP . 
M 4 HOH A 21 333 38 HOH TIP . 
M 4 HOH A 22 334 40 HOH TIP . 
M 4 HOH A 23 335 41 HOH TIP . 
M 4 HOH A 24 336 43 HOH TIP . 
M 4 HOH A 25 337 44 HOH TIP . 
M 4 HOH A 26 338 45 HOH TIP . 
M 4 HOH A 27 339 47 HOH TIP . 
M 4 HOH A 28 340 48 HOH TIP . 
M 4 HOH A 29 341 50 HOH TIP . 
M 4 HOH A 30 342 51 HOH TIP . 
M 4 HOH A 31 343 55 HOH TIP . 
M 4 HOH A 32 344 56 HOH TIP . 
M 4 HOH A 33 345 58 HOH TIP . 
M 4 HOH A 34 346 59 HOH TIP . 
M 4 HOH A 35 347 60 HOH TIP . 
M 4 HOH A 36 348 61 HOH TIP . 
M 4 HOH A 37 349 62 HOH TIP . 
M 4 HOH A 38 350 63 HOH TIP . 
M 4 HOH A 39 351 64 HOH TIP . 
M 4 HOH A 40 352 65 HOH TIP . 
M 4 HOH A 41 353 66 HOH TIP . 
M 4 HOH A 42 354 68 HOH TIP . 
M 4 HOH A 43 355 69 HOH TIP . 
M 4 HOH A 44 356 71 HOH TIP . 
M 4 HOH A 45 357 72 HOH TIP . 
M 4 HOH A 46 358 73 HOH TIP . 
M 4 HOH A 47 359 74 HOH TIP . 
M 4 HOH A 48 360 75 HOH TIP . 
M 4 HOH A 49 361 76 HOH TIP . 
M 4 HOH A 50 362 77 HOH TIP . 
M 4 HOH A 51 363 78 HOH TIP . 
M 4 HOH A 52 364 79 HOH TIP . 
M 4 HOH A 53 365 80 HOH TIP . 
M 4 HOH A 54 366 81 HOH TIP . 
M 4 HOH A 55 367 82 HOH TIP . 
M 4 HOH A 56 368 95 HOH TIP . 
M 4 HOH A 57 369 96 HOH TIP . 
N 4 HOH B 1 313 3 HOH TIP . 
N 4 HOH B 2 314 6 HOH TIP . 
N 4 HOH B 3 315 7 HOH TIP . 
N 4 HOH B 4 316 8 HOH TIP . 
N 4 HOH B 5 317 11 HOH TIP . 
N 4 HOH B 6 318 12 HOH TIP . 
N 4 HOH B 7 319 13 HOH TIP . 
N 4 HOH B 8 320 14 HOH TIP . 
N 4 HOH B 9 321 15 HOH TIP . 
N 4 HOH B 10 322 17 HOH TIP . 
N 4 HOH B 11 323 19 HOH TIP . 
N 4 HOH B 12 324 23 HOH TIP . 
N 4 HOH B 13 325 24 HOH TIP . 
N 4 HOH B 14 326 25 HOH TIP . 
N 4 HOH B 15 327 28 HOH TIP . 
N 4 HOH B 16 328 31 HOH TIP . 
N 4 HOH B 17 329 33 HOH TIP . 
N 4 HOH B 18 330 39 HOH TIP . 
N 4 HOH B 19 331 42 HOH TIP . 
N 4 HOH B 20 332 46 HOH TIP . 
N 4 HOH B 21 333 49 HOH TIP . 
N 4 HOH B 22 334 52 HOH TIP . 
N 4 HOH B 23 335 53 HOH TIP . 
N 4 HOH B 24 336 54 HOH TIP . 
N 4 HOH B 25 337 57 HOH TIP . 
N 4 HOH B 26 338 67 HOH TIP . 
N 4 HOH B 27 339 70 HOH TIP . 
N 4 HOH B 28 340 83 HOH TIP . 
N 4 HOH B 29 341 84 HOH TIP . 
N 4 HOH B 30 342 85 HOH TIP . 
N 4 HOH B 31 343 86 HOH TIP . 
N 4 HOH B 32 344 87 HOH TIP . 
N 4 HOH B 33 345 88 HOH TIP . 
N 4 HOH B 34 346 89 HOH TIP . 
N 4 HOH B 35 347 90 HOH TIP . 
N 4 HOH B 36 348 91 HOH TIP . 
N 4 HOH B 37 349 92 HOH TIP . 
N 4 HOH B 38 350 93 HOH TIP . 
N 4 HOH B 39 351 94 HOH TIP . 
N 4 HOH B 40 352 97 HOH TIP . 
N 4 HOH B 41 353 98 HOH TIP . 
N 4 HOH B 42 354 99 HOH TIP . 
N 4 HOH B 43 355 100 HOH TIP . 
N 4 HOH B 44 356 101 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . G 3 33.47 69.24 129.508 1 30.38 ? PG ATP 307 A 1 
HETATM 2 O O1G ATP . . . G 3 34.948 69.159 129.548 1 30.38 ? O1G ATP 307 A 1 
HETATM 3 O O2G ATP . . . G 3 32.547 67.926 129.375 1 30.38 ? O2G ATP 307 A 1 
HETATM 4 O O3G ATP . . . G 3 32.642 70.489 130.103 1 30.38 ? O3G ATP 307 A 1 
HETATM 5 P PB ATP . . . G 3 31.82 70.25 127.579 1 30.38 ? PB ATP 307 A 1 
HETATM 6 O O1B ATP . . . G 3 30.773 69.202 127.664 1 30.38 ? O1B ATP 307 A 1 
HETATM 7 O O2B ATP . . . G 3 31.603 71.703 127.766 1 30.38 ? O2B ATP 307 A 1 
HETATM 8 O O3B ATP . . . G 3 33.271 69.68 127.972 1 30.38 ? O3B ATP 307 A 1 
HETATM 9 P PA ATP . . . G 3 32.689 69.123 125.114 1 30.38 ? PA ATP 307 A 1 
HETATM 10 O O1A ATP . . . G 3 32.203 67.828 125.641 1 30.38 ? O1A ATP 307 A 1 
HETATM 11 O O2A ATP . . . G 3 34.151 69.347 125.029 1 30.38 ? O2A ATP 307 A 1 
HETATM 12 O O3A ATP . . . G 3 32.054 70.322 125.983 1 30.38 ? O3A ATP 307 A 1 
HETATM 13 O O5' ATP . . . G 3 32.038 69.396 123.664 1 30.38 ? O5' ATP 307 A 1 
HETATM 14 C C5' ATP . . . G 3 32.18 70.687 123.062 1 30.38 ? C5' ATP 307 A 1 
HETATM 15 C C4' ATP . . . G 3 31.192 70.88 121.91 1 30.38 ? C4' ATP 307 A 1 
HETATM 16 O O4' ATP . . . G 3 31.396 69.797 120.984 1 30.38 ? O4' ATP 307 A 1 
HETATM 17 C C3' ATP . . . G 3 29.75 70.758 122.414 1 30.38 ? C3' ATP 307 A 1 
HETATM 18 O O3' ATP . . . G 3 28.875 71.574 121.629 1 30.38 ? O3' ATP 307 A 1 
HETATM 19 C C2' ATP . . . G 3 29.463 69.279 122.16 1 30.38 ? C2' ATP 307 A 1 
HETATM 20 O O2' ATP . . . G 3 28.056 69.08 122.002 1 30.38 ? O2' ATP 307 A 1 
HETATM 21 C C1' ATP . . . G 3 30.133 69.137 120.794 1 30.38 ? C1' ATP 307 A 1 
HETATM 22 N N9 ATP . . . G 3 30.349 67.706 120.483 1 30.38 ? N9 ATP 307 A 1 
HETATM 23 C C8 ATP . . . G 3 31.186 66.895 121.129 1 30.38 ? C8 ATP 307 A 1 
HETATM 24 N N7 ATP . . . G 3 31.122 65.672 120.606 1 30.38 ? N7 ATP 307 A 1 
HETATM 25 C C5 ATP . . . G 3 30.231 65.699 119.619 1 30.38 ? C5 ATP 307 A 1 
HETATM 26 C C6 ATP . . . G 3 29.734 64.74 118.745 1 30.38 ? C6 ATP 307 A 1 
HETATM 27 N N6 ATP . . . G 3 30.179 63.486 118.791 1 30.38 ? N6 ATP 307 A 1 
HETATM 28 N N1 ATP . . . G 3 28.803 65.108 117.851 1 30.38 ? N1 ATP 307 A 1 
HETATM 29 C C2 ATP . . . G 3 28.366 66.355 117.795 1 30.38 ? C2 ATP 307 A 1 
HETATM 30 N N3 ATP . . . G 3 28.816 67.291 118.612 1 30.38 ? N3 ATP 307 A 1 
HETATM 31 C C4 ATP . . . G 3 29.743 66.996 119.535 1 30.38 ? C4 ATP 307 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#