data_3C9S # _model_server_result.job_id Cwy0kOKbNYOrfyAbVXkplw _model_server_result.datetime_utc '2024-12-03 20:01:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3c9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":903}' # _entry.id 3C9S # _exptl.entry_id 3C9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3C9S _cell.length_a 61.204 _cell.length_b 67.137 _cell.length_c 203.472 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3C9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 70 A CYS 34 1_555 B SG CYS 70 B CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 A OD1 ASP 63 A ASP 27 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc2 A OD1 ASP 79 A ASP 43 1_555 C MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 A OD2 ASP 79 A ASP 43 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc4 A OD1 ASP 107 A ASP 71 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc5 A OD2 ASP 107 A ASP 71 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc6 A OD1 ASP 243 A ASP 207 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc7 C MG MG . A MG 901 1_555 B ND2 ASN 155 B ASN 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc8 C MG MG . A MG 901 1_555 J O1A ACP . B ACP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc9 C MG MG . A MG 901 1_555 J O2B ACP . B ACP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc10 C MG MG . A MG 901 1_555 L O HOH . B HOH 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc11 D MG MG . A MG 902 1_555 K O HOH . A HOH 982 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc12 K O HOH . A HOH 981 1_555 H MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc13 K O HOH . A HOH 984 1_555 H MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc14 B OD2 ASP 63 B ASP 27 1_555 G MG MG . B MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc15 B O THR 78 B THR 42 1_555 H MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc16 B OD1 ASP 79 B ASP 43 1_555 H MG MG . B MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc17 B OD1 ASP 107 B ASP 71 1_555 G MG MG . B MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc18 B OD2 ASP 107 B ASP 71 1_555 I MG MG . B MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc19 B OD1 ASP 243 B ASP 207 1_555 G MG MG . B MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc20 I MG MG . B MG 903 1_555 L O HOH . B HOH 973 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3C9S _atom_sites.fract_transf_matrix[1][1] 0.016339 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004915 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 901 901 MG MG . D 2 MG A 1 902 902 MG MG . E 2 MG A 1 903 903 MG MG . F 3 ACP A 1 900 900 ACP ACP . G 2 MG B 1 901 901 MG MG . H 2 MG B 1 902 902 MG MG . I 2 MG B 1 903 903 MG MG . J 3 ACP B 1 900 900 ACP ACP . K 4 HOH A 1 904 3 HOH TIP . K 4 HOH A 2 905 5 HOH TIP . K 4 HOH A 3 906 8 HOH TIP . K 4 HOH A 4 907 9 HOH TIP . K 4 HOH A 5 908 11 HOH TIP . K 4 HOH A 6 909 14 HOH TIP . K 4 HOH A 7 910 16 HOH TIP . K 4 HOH A 8 911 17 HOH TIP . K 4 HOH A 9 912 18 HOH TIP . K 4 HOH A 10 913 20 HOH TIP . K 4 HOH A 11 914 22 HOH TIP . K 4 HOH A 12 915 23 HOH TIP . K 4 HOH A 13 916 25 HOH TIP . K 4 HOH A 14 917 26 HOH TIP . K 4 HOH A 15 918 28 HOH TIP . K 4 HOH A 16 919 29 HOH TIP . K 4 HOH A 17 920 30 HOH TIP . K 4 HOH A 18 921 31 HOH TIP . K 4 HOH A 19 922 35 HOH TIP . K 4 HOH A 20 923 42 HOH TIP . K 4 HOH A 21 924 45 HOH TIP . K 4 HOH A 22 925 49 HOH TIP . K 4 HOH A 23 926 52 HOH TIP . K 4 HOH A 24 927 55 HOH TIP . K 4 HOH A 25 928 56 HOH TIP . K 4 HOH A 26 929 57 HOH TIP . K 4 HOH A 27 930 58 HOH TIP . K 4 HOH A 28 931 60 HOH TIP . K 4 HOH A 29 932 63 HOH TIP . K 4 HOH A 30 933 64 HOH TIP . K 4 HOH A 31 934 65 HOH TIP . K 4 HOH A 32 935 66 HOH TIP . K 4 HOH A 33 936 69 HOH TIP . K 4 HOH A 34 937 71 HOH TIP . K 4 HOH A 35 938 73 HOH TIP . K 4 HOH A 36 939 74 HOH TIP . K 4 HOH A 37 940 76 HOH TIP . K 4 HOH A 38 941 77 HOH TIP . K 4 HOH A 39 942 78 HOH TIP . K 4 HOH A 40 943 81 HOH TIP . K 4 HOH A 41 944 84 HOH TIP . K 4 HOH A 42 945 89 HOH TIP . K 4 HOH A 43 946 111 HOH TIP . K 4 HOH A 44 947 112 HOH TIP . K 4 HOH A 45 948 113 HOH TIP . K 4 HOH A 46 949 114 HOH TIP . K 4 HOH A 47 950 115 HOH TIP . K 4 HOH A 48 951 116 HOH TIP . K 4 HOH A 49 952 117 HOH TIP . K 4 HOH A 50 953 118 HOH TIP . K 4 HOH A 51 954 119 HOH TIP . K 4 HOH A 52 955 120 HOH TIP . K 4 HOH A 53 956 121 HOH TIP . K 4 HOH A 54 957 122 HOH TIP . K 4 HOH A 55 958 124 HOH TIP . K 4 HOH A 56 959 125 HOH TIP . K 4 HOH A 57 960 126 HOH TIP . K 4 HOH A 58 961 127 HOH TIP . K 4 HOH A 59 962 129 HOH TIP . K 4 HOH A 60 963 130 HOH TIP . K 4 HOH A 61 964 131 HOH TIP . K 4 HOH A 62 965 132 HOH TIP . K 4 HOH A 63 966 133 HOH TIP . K 4 HOH A 64 967 134 HOH TIP . K 4 HOH A 65 968 135 HOH TIP . K 4 HOH A 66 969 136 HOH TIP . K 4 HOH A 67 970 140 HOH TIP . K 4 HOH A 68 971 141 HOH TIP . K 4 HOH A 69 972 142 HOH TIP . K 4 HOH A 70 973 143 HOH TIP . K 4 HOH A 71 974 144 HOH TIP . K 4 HOH A 72 975 145 HOH TIP . K 4 HOH A 73 976 146 HOH TIP . K 4 HOH A 74 977 147 HOH TIP . K 4 HOH A 75 978 166 HOH TIP . K 4 HOH A 76 979 167 HOH TIP . K 4 HOH A 77 980 168 HOH TIP . K 4 HOH A 78 981 170 HOH TIP . K 4 HOH A 79 982 172 HOH TIP . K 4 HOH A 80 983 173 HOH TIP . K 4 HOH A 81 984 175 HOH TIP . K 4 HOH A 82 985 178 HOH TIP . K 4 HOH A 83 986 179 HOH TIP . K 4 HOH A 84 987 180 HOH TIP . L 4 HOH B 1 904 1 HOH TIP . L 4 HOH B 2 905 2 HOH TIP . L 4 HOH B 3 906 4 HOH TIP . L 4 HOH B 4 907 7 HOH TIP . L 4 HOH B 5 908 10 HOH TIP . L 4 HOH B 6 909 12 HOH TIP . L 4 HOH B 7 910 13 HOH TIP . L 4 HOH B 8 911 15 HOH TIP . L 4 HOH B 9 912 19 HOH TIP . L 4 HOH B 10 913 21 HOH TIP . L 4 HOH B 11 914 24 HOH TIP . L 4 HOH B 12 915 27 HOH TIP . L 4 HOH B 13 916 32 HOH TIP . L 4 HOH B 14 917 33 HOH TIP . L 4 HOH B 15 918 34 HOH TIP . L 4 HOH B 16 919 36 HOH TIP . L 4 HOH B 17 920 37 HOH TIP . L 4 HOH B 18 921 38 HOH TIP . L 4 HOH B 19 922 39 HOH TIP . L 4 HOH B 20 923 40 HOH TIP . L 4 HOH B 21 924 41 HOH TIP . L 4 HOH B 22 925 43 HOH TIP . L 4 HOH B 23 926 44 HOH TIP . L 4 HOH B 24 927 46 HOH TIP . L 4 HOH B 25 928 47 HOH TIP . L 4 HOH B 26 929 48 HOH TIP . L 4 HOH B 27 930 50 HOH TIP . L 4 HOH B 28 931 51 HOH TIP . L 4 HOH B 29 932 53 HOH TIP . L 4 HOH B 30 933 54 HOH TIP . L 4 HOH B 31 934 59 HOH TIP . L 4 HOH B 32 935 61 HOH TIP . L 4 HOH B 33 936 62 HOH TIP . L 4 HOH B 34 937 67 HOH TIP . L 4 HOH B 35 938 68 HOH TIP . L 4 HOH B 36 939 70 HOH TIP . L 4 HOH B 37 940 72 HOH TIP . L 4 HOH B 38 941 75 HOH TIP . L 4 HOH B 39 942 79 HOH TIP . L 4 HOH B 40 943 80 HOH TIP . L 4 HOH B 41 944 82 HOH TIP . L 4 HOH B 42 945 83 HOH TIP . L 4 HOH B 43 946 85 HOH TIP . L 4 HOH B 44 947 86 HOH TIP . L 4 HOH B 45 948 87 HOH TIP . L 4 HOH B 46 949 88 HOH TIP . L 4 HOH B 47 950 123 HOH TIP . L 4 HOH B 48 951 128 HOH TIP . L 4 HOH B 49 952 137 HOH TIP . L 4 HOH B 50 953 138 HOH TIP . L 4 HOH B 51 954 148 HOH TIP . L 4 HOH B 52 955 150 HOH TIP . L 4 HOH B 53 956 151 HOH TIP . L 4 HOH B 54 957 152 HOH TIP . L 4 HOH B 55 958 153 HOH TIP . L 4 HOH B 56 959 154 HOH TIP . L 4 HOH B 57 960 155 HOH TIP . L 4 HOH B 58 961 156 HOH TIP . L 4 HOH B 59 962 157 HOH TIP . L 4 HOH B 60 963 158 HOH TIP . L 4 HOH B 61 964 159 HOH TIP . L 4 HOH B 62 965 160 HOH TIP . L 4 HOH B 63 966 161 HOH TIP . L 4 HOH B 64 967 162 HOH TIP . L 4 HOH B 65 968 163 HOH TIP . L 4 HOH B 66 969 164 HOH TIP . L 4 HOH B 67 970 165 HOH TIP . L 4 HOH B 68 971 169 HOH TIP . L 4 HOH B 69 972 171 HOH TIP . L 4 HOH B 70 973 174 HOH TIP . L 4 HOH B 71 974 176 HOH TIP . L 4 HOH B 72 975 177 HOH TIP . L 4 HOH B 73 976 181 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.619 _atom_site.Cartn_y 50.581 _atom_site.Cartn_z 122.308 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 903 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 40 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 754 _model_server_stats.encode_time_ms 36 _model_server_stats.element_count 1 #