data_3CCO # _model_server_result.job_id lWJbJjtAzfa-1TgQ5dFxvQ _model_server_result.datetime_utc '2024-11-24 07:56:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":31}' # _entry.id 3CCO # _exptl.entry_id 3CCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3CCO _cell.length_a 61.35 _cell.length_b 61.35 _cell.length_c 43.63 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -30.675 53.130659 -14.543333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NA NA . A NA 4 1_555 A O4' DG 11 A DG 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc2 C K K . A K 30 1_555 A O6 DG 4 A DG 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? metalc ? metalc3 C K K . A K 30 1_555 A O6 DG 5 A DG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.769 ? metalc ? metalc4 C K K . A K 30 1_555 A O6 DG 11 A DG 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc5 D K K . A K 31 1_555 A O6 DG 3 A DG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc6 D K K . A K 31 1_555 A O6 DG 9 A DG 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? metalc ? metalc7 E K K . A K 32 1_555 A O6 DG 3 A DG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? metalc ? metalc8 E K K . A K 32 1_555 A O6 DG 9 A DG 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? hydrog TYPE_11_PAIR hydrog1 A N2 DG 3 A DG 1003 1_555 A N7 DA 8 A DA 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog2 A N3 DG 3 A DG 1003 1_555 A N6 DA 8 A DA 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog3 A N1 DG 3 A DG 1003 1_555 A O6 DG 9 A DG 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog4 A N2 DG 3 A DG 1003 1_555 A N7 DG 9 A DG 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog5 A N1 DG 4 A DG 1004 1_555 A O6 DG 10 A DG 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog6 A N2 DG 4 A DG 1004 1_555 A N7 DG 10 A DG 1010 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog7 A N1 DG 5 A DG 1005 1_555 A O6 DG 11 A DG 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog8 A N2 DG 5 A DG 1005 1_555 A N7 DG 11 A DG 1011 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CCO _atom_sites.fract_transf_matrix[1][1] 0.0163 _atom_sites.fract_transf_matrix[1][2] 0.009411 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018822 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02292 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 4 1 NA NA . C 3 K A 1 30 30 K K . D 3 K A 1 31 31 K K . E 3 K A 1 32 32 K K . F 4 NII A 1 1 1 NII P10 . G 4 NII A 1 2 2 NII P10 . H 4 NII A 1 3 3 NII P10 . I 5 HOH A 1 1013 2 HOH HOH . I 5 HOH A 2 1014 3 HOH HOH . I 5 HOH A 3 1015 4 HOH HOH . I 5 HOH A 4 1016 5 HOH HOH . I 5 HOH A 5 1017 6 HOH HOH . I 5 HOH A 6 1018 7 HOH HOH . I 5 HOH A 7 1019 8 HOH HOH . I 5 HOH A 8 1020 9 HOH HOH . I 5 HOH A 9 1021 10 HOH HOH . I 5 HOH A 10 1022 11 HOH HOH . I 5 HOH A 11 1023 12 HOH HOH . I 5 HOH A 12 1024 13 HOH HOH . I 5 HOH A 13 1025 14 HOH HOH . I 5 HOH A 14 1026 15 HOH HOH . I 5 HOH A 15 1027 16 HOH HOH . I 5 HOH A 16 1028 17 HOH HOH . I 5 HOH A 17 1029 18 HOH HOH . I 5 HOH A 18 1030 19 HOH HOH . I 5 HOH A 19 1031 20 HOH HOH . I 5 HOH A 20 1032 21 HOH HOH . I 5 HOH A 21 1033 22 HOH HOH . I 5 HOH A 22 1034 23 HOH HOH . I 5 HOH A 23 1035 24 HOH HOH . I 5 HOH A 24 1036 25 HOH HOH . I 5 HOH A 25 1037 26 HOH HOH . I 5 HOH A 26 1038 27 HOH HOH . I 5 HOH A 27 1039 28 HOH HOH . I 5 HOH A 28 1040 29 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -18.15 _atom_site.Cartn_y 24.747 _atom_site.Cartn_z -7.311 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 15.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 31 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #