data_3CEB # _model_server_result.job_id tODGB9xZsAUMJzA-fmfNBA _model_server_result.datetime_utc '2024-11-13 12:08:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ceb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":194}' # _entry.id 3CEB # _exptl.entry_id 3CEB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3CEB _cell.length_a 149.73 _cell.length_b 149.73 _cell.length_c 34.04 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CEB _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale2 A C MSE 2 A MSE 1 1_555 A N TRP 3 A TRP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale3 A C LYS 38 A LYS 37 1_555 A N MSE 39 A MSE 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C MSE 39 A MSE 38 1_555 A N LYS 40 A LYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 A C LEU 102 A LEU 101 1_555 A N LLP 103 A LLP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? covale ? covale6 A C LLP 103 A LLP 102 1_555 A N PHE 104 A PHE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 A C ILE 123 A ILE 122 1_555 A N MSE 124 A MSE 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale8 A C MSE 124 A MSE 123 1_555 A N ILE 125 A ILE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 A C ALA 190 A ALA 189 1_555 A N MSE 191 A MSE 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale10 A C MSE 191 A MSE 190 1_555 A N ASN 192 A ASN 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CEB _atom_sites.fract_transf_matrix[1][1] 0.006679 _atom_sites.fract_transf_matrix[1][2] 0.003856 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007712 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 194 1 SO4 SO4 . C 2 SO4 A 1 195 2 SO4 SO4 . D 2 SO4 A 1 196 3 SO4 SO4 . E 2 SO4 A 1 197 4 SO4 SO4 . F 2 SO4 A 1 198 5 SO4 SO4 . G 3 GOL A 1 199 6 GOL GOL . H 4 HOH A 1 200 7 HOH HOH . H 4 HOH A 2 201 8 HOH HOH . H 4 HOH A 3 202 9 HOH HOH . H 4 HOH A 4 203 10 HOH HOH . H 4 HOH A 5 204 11 HOH HOH . H 4 HOH A 6 205 12 HOH HOH . H 4 HOH A 7 206 13 HOH HOH . H 4 HOH A 8 207 14 HOH HOH . H 4 HOH A 9 208 15 HOH HOH . H 4 HOH A 10 209 16 HOH HOH . H 4 HOH A 11 210 17 HOH HOH . H 4 HOH A 12 211 18 HOH HOH . H 4 HOH A 13 212 19 HOH HOH . H 4 HOH A 14 213 20 HOH HOH . H 4 HOH A 15 214 21 HOH HOH . H 4 HOH A 16 215 22 HOH HOH . H 4 HOH A 17 216 23 HOH HOH . H 4 HOH A 18 217 24 HOH HOH . H 4 HOH A 19 218 25 HOH HOH . H 4 HOH A 20 219 26 HOH HOH . H 4 HOH A 21 220 27 HOH HOH . H 4 HOH A 22 221 28 HOH HOH . H 4 HOH A 23 222 29 HOH HOH . H 4 HOH A 24 223 30 HOH HOH . H 4 HOH A 25 224 31 HOH HOH . H 4 HOH A 26 225 32 HOH HOH . H 4 HOH A 27 226 33 HOH HOH . H 4 HOH A 28 227 34 HOH HOH . H 4 HOH A 29 228 35 HOH HOH . H 4 HOH A 30 229 36 HOH HOH . H 4 HOH A 31 230 37 HOH HOH . H 4 HOH A 32 231 38 HOH HOH . H 4 HOH A 33 232 39 HOH HOH . H 4 HOH A 34 233 40 HOH HOH . H 4 HOH A 35 234 41 HOH HOH . H 4 HOH A 36 235 42 HOH HOH . H 4 HOH A 37 236 43 HOH HOH . H 4 HOH A 38 237 44 HOH HOH . H 4 HOH A 39 238 45 HOH HOH . H 4 HOH A 40 239 46 HOH HOH . H 4 HOH A 41 240 47 HOH HOH . H 4 HOH A 42 241 48 HOH HOH . H 4 HOH A 43 242 49 HOH HOH . H 4 HOH A 44 243 50 HOH HOH . H 4 HOH A 45 244 51 HOH HOH . H 4 HOH A 46 245 52 HOH HOH . H 4 HOH A 47 246 53 HOH HOH . H 4 HOH A 48 247 54 HOH HOH . H 4 HOH A 49 248 55 HOH HOH . H 4 HOH A 50 249 56 HOH HOH . H 4 HOH A 51 250 57 HOH HOH . H 4 HOH A 52 251 58 HOH HOH . H 4 HOH A 53 252 59 HOH HOH . H 4 HOH A 54 253 60 HOH HOH . H 4 HOH A 55 254 61 HOH HOH . H 4 HOH A 56 255 62 HOH HOH . H 4 HOH A 57 256 63 HOH HOH . H 4 HOH A 58 257 64 HOH HOH . H 4 HOH A 59 258 65 HOH HOH . H 4 HOH A 60 259 66 HOH HOH . H 4 HOH A 61 260 67 HOH HOH . H 4 HOH A 62 261 68 HOH HOH . H 4 HOH A 63 262 69 HOH HOH . H 4 HOH A 64 263 70 HOH HOH . H 4 HOH A 65 264 71 HOH HOH . H 4 HOH A 66 265 72 HOH HOH . H 4 HOH A 67 266 73 HOH HOH . H 4 HOH A 68 267 74 HOH HOH . H 4 HOH A 69 268 75 HOH HOH . H 4 HOH A 70 269 76 HOH HOH . H 4 HOH A 71 270 77 HOH HOH . H 4 HOH A 72 271 78 HOH HOH . H 4 HOH A 73 272 79 HOH HOH . H 4 HOH A 74 273 80 HOH HOH . H 4 HOH A 75 274 81 HOH HOH . H 4 HOH A 76 275 82 HOH HOH . H 4 HOH A 77 276 83 HOH HOH . H 4 HOH A 78 277 84 HOH HOH . H 4 HOH A 79 278 85 HOH HOH . H 4 HOH A 80 279 86 HOH HOH . H 4 HOH A 81 280 87 HOH HOH . H 4 HOH A 82 281 88 HOH HOH . H 4 HOH A 83 282 89 HOH HOH . H 4 HOH A 84 283 90 HOH HOH . H 4 HOH A 85 284 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 -8.291 87.672 -12.014 1 27.4 ? S SO4 194 A 1 HETATM 2 O O1 SO4 . . . B 2 -7.318 86.742 -12.616 1 25.49 ? O1 SO4 194 A 1 HETATM 3 O O2 SO4 . . . B 2 -9.023 88.379 -13.032 1 25.65 ? O2 SO4 194 A 1 HETATM 4 O O3 SO4 . . . B 2 -9.338 87.054 -11.211 1 22.91 ? O3 SO4 194 A 1 HETATM 5 O O4 SO4 . . . B 2 -7.504 88.564 -11.185 1 27.5 ? O4 SO4 194 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #