data_3CEB
#
_model_server_result.job_id            ubQQDZbkOUh6KUf59lx9GA 
_model_server_result.datetime_utc      '2024-11-13 11:54:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ceb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":199}' 
#
_entry.id    3CEB 
#
_exptl.entry_id    3CEB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3CEB 
_cell.length_a            149.73 
_cell.length_b            149.73 
_cell.length_c            34.04 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3CEB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale2 A C MSE 2 A MSE 1 1_555 A N TRP 3 A TRP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? 
covale ? covale3 A C LYS 38 A LYS 37 1_555 A N MSE 39 A MSE 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 A C MSE 39 A MSE 38 1_555 A N LYS 40 A LYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale5 A C LEU 102 A LEU 101 1_555 A N LLP 103 A LLP 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? 
covale ? covale6 A C LLP 103 A LLP 102 1_555 A N PHE 104 A PHE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale7 A C ILE 123 A ILE 122 1_555 A N MSE 124 A MSE 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale8 A C MSE 124 A MSE 123 1_555 A N ILE 125 A ILE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale9 A C ALA 190 A ALA 189 1_555 A N MSE 191 A MSE 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale10 A C MSE 191 A MSE 190 1_555 A N ASN 192 A ASN 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
_atom_sites.entry_id                     3CEB 
_atom_sites.fract_transf_matrix[1][1]    0.006679 
_atom_sites.fract_transf_matrix[1][2]    0.003856 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007712 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029377 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 194 1 SO4 SO4 . 
C 2 SO4 A 1 195 2 SO4 SO4 . 
D 2 SO4 A 1 196 3 SO4 SO4 . 
E 2 SO4 A 1 197 4 SO4 SO4 . 
F 2 SO4 A 1 198 5 SO4 SO4 . 
G 3 GOL A 1 199 6 GOL GOL . 
H 4 HOH A 1 200 7 HOH HOH . 
H 4 HOH A 2 201 8 HOH HOH . 
H 4 HOH A 3 202 9 HOH HOH . 
H 4 HOH A 4 203 10 HOH HOH . 
H 4 HOH A 5 204 11 HOH HOH . 
H 4 HOH A 6 205 12 HOH HOH . 
H 4 HOH A 7 206 13 HOH HOH . 
H 4 HOH A 8 207 14 HOH HOH . 
H 4 HOH A 9 208 15 HOH HOH . 
H 4 HOH A 10 209 16 HOH HOH . 
H 4 HOH A 11 210 17 HOH HOH . 
H 4 HOH A 12 211 18 HOH HOH . 
H 4 HOH A 13 212 19 HOH HOH . 
H 4 HOH A 14 213 20 HOH HOH . 
H 4 HOH A 15 214 21 HOH HOH . 
H 4 HOH A 16 215 22 HOH HOH . 
H 4 HOH A 17 216 23 HOH HOH . 
H 4 HOH A 18 217 24 HOH HOH . 
H 4 HOH A 19 218 25 HOH HOH . 
H 4 HOH A 20 219 26 HOH HOH . 
H 4 HOH A 21 220 27 HOH HOH . 
H 4 HOH A 22 221 28 HOH HOH . 
H 4 HOH A 23 222 29 HOH HOH . 
H 4 HOH A 24 223 30 HOH HOH . 
H 4 HOH A 25 224 31 HOH HOH . 
H 4 HOH A 26 225 32 HOH HOH . 
H 4 HOH A 27 226 33 HOH HOH . 
H 4 HOH A 28 227 34 HOH HOH . 
H 4 HOH A 29 228 35 HOH HOH . 
H 4 HOH A 30 229 36 HOH HOH . 
H 4 HOH A 31 230 37 HOH HOH . 
H 4 HOH A 32 231 38 HOH HOH . 
H 4 HOH A 33 232 39 HOH HOH . 
H 4 HOH A 34 233 40 HOH HOH . 
H 4 HOH A 35 234 41 HOH HOH . 
H 4 HOH A 36 235 42 HOH HOH . 
H 4 HOH A 37 236 43 HOH HOH . 
H 4 HOH A 38 237 44 HOH HOH . 
H 4 HOH A 39 238 45 HOH HOH . 
H 4 HOH A 40 239 46 HOH HOH . 
H 4 HOH A 41 240 47 HOH HOH . 
H 4 HOH A 42 241 48 HOH HOH . 
H 4 HOH A 43 242 49 HOH HOH . 
H 4 HOH A 44 243 50 HOH HOH . 
H 4 HOH A 45 244 51 HOH HOH . 
H 4 HOH A 46 245 52 HOH HOH . 
H 4 HOH A 47 246 53 HOH HOH . 
H 4 HOH A 48 247 54 HOH HOH . 
H 4 HOH A 49 248 55 HOH HOH . 
H 4 HOH A 50 249 56 HOH HOH . 
H 4 HOH A 51 250 57 HOH HOH . 
H 4 HOH A 52 251 58 HOH HOH . 
H 4 HOH A 53 252 59 HOH HOH . 
H 4 HOH A 54 253 60 HOH HOH . 
H 4 HOH A 55 254 61 HOH HOH . 
H 4 HOH A 56 255 62 HOH HOH . 
H 4 HOH A 57 256 63 HOH HOH . 
H 4 HOH A 58 257 64 HOH HOH . 
H 4 HOH A 59 258 65 HOH HOH . 
H 4 HOH A 60 259 66 HOH HOH . 
H 4 HOH A 61 260 67 HOH HOH . 
H 4 HOH A 62 261 68 HOH HOH . 
H 4 HOH A 63 262 69 HOH HOH . 
H 4 HOH A 64 263 70 HOH HOH . 
H 4 HOH A 65 264 71 HOH HOH . 
H 4 HOH A 66 265 72 HOH HOH . 
H 4 HOH A 67 266 73 HOH HOH . 
H 4 HOH A 68 267 74 HOH HOH . 
H 4 HOH A 69 268 75 HOH HOH . 
H 4 HOH A 70 269 76 HOH HOH . 
H 4 HOH A 71 270 77 HOH HOH . 
H 4 HOH A 72 271 78 HOH HOH . 
H 4 HOH A 73 272 79 HOH HOH . 
H 4 HOH A 74 273 80 HOH HOH . 
H 4 HOH A 75 274 81 HOH HOH . 
H 4 HOH A 76 275 82 HOH HOH . 
H 4 HOH A 77 276 83 HOH HOH . 
H 4 HOH A 78 277 84 HOH HOH . 
H 4 HOH A 79 278 85 HOH HOH . 
H 4 HOH A 80 279 86 HOH HOH . 
H 4 HOH A 81 280 87 HOH HOH . 
H 4 HOH A 82 281 88 HOH HOH . 
H 4 HOH A 83 282 89 HOH HOH . 
H 4 HOH A 84 283 90 HOH HOH . 
H 4 HOH A 85 284 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 3 -20.329 64.251 9.385 1 61.06 ? C1 GOL 199 A 1 
HETATM 2 O O1 GOL . . . G 3 -19.491 63.755 8.375 1 61.14 ? O1 GOL 199 A 1 
HETATM 3 C C2 GOL . . . G 3 -21.787 63.81 9.197 1 60.67 ? C2 GOL 199 A 1 
HETATM 4 O O2 GOL . . . G 3 -22.461 64.3 10.358 1 60.41 ? O2 GOL 199 A 1 
HETATM 5 C C3 GOL . . . G 3 -22.339 64.301 7.822 1 59.24 ? C3 GOL 199 A 1 
HETATM 6 O O3 GOL . . . G 3 -23.713 64.716 7.791 1 55.52 ? O3 GOL 199 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#