data_3CEC
#
_model_server_result.job_id            A01hBzRjv46emlOZVzm3nw 
_model_server_result.datetime_utc      '2024-11-26 14:48:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3cec 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":104}' 
#
_entry.id    3CEC 
#
_exptl.entry_id    3CEC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4R)-2-METHYLPENTANE-2,4-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.38 
_cell.angle_gamma         90 
_cell.entry_id            3CEC 
_cell.length_a            35.07 
_cell.length_b            36.71 
_cell.length_c            50.05 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3CEC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C VAL 100 A VAL 99 1_555 A N MSE 101 A MSE 100 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 A C VAL 100 A VAL 99 1_555 A N MSE 101 A MSE 100 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 A C VAL 100 A VAL 99 1_555 A N MSE 101 A MSE 100 1_555 ? ? ? ? C ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 A C MSE 101 A MSE 100 1_555 A N THR 102 A THR 101 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.312 ? 
covale ? covale5 A C MSE 101 A MSE 100 1_555 A N THR 102 A THR 101 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale6 A C MSE 101 A MSE 100 1_555 A N THR 102 A THR 101 1_555 ? C ? ? ? ? ? ? ? ? ? ? 1.319 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MRD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4R)-2-METHYLPENTANE-2,4-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MRD sing 205 n n 
C1 H1C1 MRD sing 206 n n 
C1 H1C2 MRD sing 207 n n 
C1 H1C3 MRD sing 208 n n 
C2 O2 MRD sing 209 n n 
C2 CM MRD sing 210 n n 
C2 C3 MRD sing 211 n n 
O2 H2 MRD sing 212 n n 
CM HMC1 MRD sing 213 n n 
CM HMC2 MRD sing 214 n n 
CM HMC3 MRD sing 215 n n 
C3 C4 MRD sing 216 n n 
C3 H3C1 MRD sing 217 n n 
C3 H3C2 MRD sing 218 n n 
C4 O4 MRD sing 219 n n 
C4 C5 MRD sing 220 n n 
C4 H4 MRD sing 221 n n 
O4 HA MRD sing 222 n n 
C5 H5C1 MRD sing 223 n n 
C5 H5C2 MRD sing 224 n n 
C5 H5C3 MRD sing 225 n n 
#
_atom_sites.entry_id                     3CEC 
_atom_sites.fract_transf_matrix[1][1]    0.028514 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004199 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.027241 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020196 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MRD A 1 104 1 MRD MRD . 
C 3 PEG A 1 105 2 PEG PEG . 
D 4 HOH A 1 106 3 HOH HOH . 
D 4 HOH A 2 107 4 HOH HOH . 
D 4 HOH A 3 108 5 HOH HOH . 
D 4 HOH A 4 109 6 HOH HOH . 
D 4 HOH A 5 110 7 HOH HOH . 
D 4 HOH A 6 111 8 HOH HOH . 
D 4 HOH A 7 112 9 HOH HOH . 
D 4 HOH A 8 113 10 HOH HOH . 
D 4 HOH A 9 114 11 HOH HOH . 
D 4 HOH A 10 115 12 HOH HOH . 
D 4 HOH A 11 116 13 HOH HOH . 
D 4 HOH A 12 117 14 HOH HOH . 
D 4 HOH A 13 118 15 HOH HOH . 
D 4 HOH A 14 119 16 HOH HOH . 
D 4 HOH A 15 120 17 HOH HOH . 
D 4 HOH A 16 121 18 HOH HOH . 
D 4 HOH A 17 122 19 HOH HOH . 
D 4 HOH A 18 123 20 HOH HOH . 
D 4 HOH A 19 124 21 HOH HOH . 
D 4 HOH A 20 125 22 HOH HOH . 
D 4 HOH A 21 126 23 HOH HOH . 
D 4 HOH A 22 127 24 HOH HOH . 
D 4 HOH A 23 128 25 HOH HOH . 
D 4 HOH A 24 129 26 HOH HOH . 
D 4 HOH A 25 130 27 HOH HOH . 
D 4 HOH A 26 131 28 HOH HOH . 
D 4 HOH A 27 132 29 HOH HOH . 
D 4 HOH A 28 133 30 HOH HOH . 
D 4 HOH A 29 134 31 HOH HOH . 
D 4 HOH A 30 135 32 HOH HOH . 
D 4 HOH A 31 136 33 HOH HOH . 
D 4 HOH A 32 137 34 HOH HOH . 
D 4 HOH A 33 138 35 HOH HOH . 
D 4 HOH A 34 139 36 HOH HOH . 
D 4 HOH A 35 140 37 HOH HOH . 
D 4 HOH A 36 141 38 HOH HOH . 
D 4 HOH A 37 142 39 HOH HOH . 
D 4 HOH A 38 143 40 HOH HOH . 
D 4 HOH A 39 144 41 HOH HOH . 
D 4 HOH A 40 145 42 HOH HOH . 
D 4 HOH A 41 146 43 HOH HOH . 
D 4 HOH A 42 147 44 HOH HOH . 
D 4 HOH A 43 148 45 HOH HOH . 
D 4 HOH A 44 149 46 HOH HOH . 
D 4 HOH A 45 150 47 HOH HOH . 
D 4 HOH A 46 151 48 HOH HOH . 
D 4 HOH A 47 152 49 HOH HOH . 
D 4 HOH A 48 153 50 HOH HOH . 
D 4 HOH A 49 154 51 HOH HOH . 
D 4 HOH A 50 155 52 HOH HOH . 
D 4 HOH A 51 156 53 HOH HOH . 
D 4 HOH A 52 157 54 HOH HOH . 
D 4 HOH A 53 158 55 HOH HOH . 
D 4 HOH A 54 159 56 HOH HOH . 
D 4 HOH A 55 160 57 HOH HOH . 
D 4 HOH A 56 161 58 HOH HOH . 
D 4 HOH A 57 162 59 HOH HOH . 
D 4 HOH A 58 163 60 HOH HOH . 
D 4 HOH A 59 164 61 HOH HOH . 
D 4 HOH A 60 165 62 HOH HOH . 
D 4 HOH A 61 166 63 HOH HOH . 
D 4 HOH A 62 167 64 HOH HOH . 
D 4 HOH A 63 168 65 HOH HOH . 
D 4 HOH A 64 169 66 HOH HOH . 
D 4 HOH A 65 170 67 HOH HOH . 
D 4 HOH A 66 171 68 HOH HOH . 
D 4 HOH A 67 172 69 HOH HOH . 
D 4 HOH A 68 173 70 HOH HOH . 
D 4 HOH A 69 174 71 HOH HOH . 
D 4 HOH A 70 175 72 HOH HOH . 
D 4 HOH A 71 176 73 HOH HOH . 
D 4 HOH A 72 177 74 HOH HOH . 
D 4 HOH A 73 178 75 HOH HOH . 
D 4 HOH A 74 179 76 HOH HOH . 
D 4 HOH A 75 180 77 HOH HOH . 
D 4 HOH A 76 181 78 HOH HOH . 
D 4 HOH A 77 182 79 HOH HOH . 
D 4 HOH A 78 183 80 HOH HOH . 
D 4 HOH A 79 184 81 HOH HOH . 
D 4 HOH A 80 185 82 HOH HOH . 
D 4 HOH A 81 186 83 HOH HOH . 
D 4 HOH A 82 187 84 HOH HOH . 
D 4 HOH A 83 188 85 HOH HOH . 
D 4 HOH A 84 189 86 HOH HOH . 
D 4 HOH A 85 190 87 HOH HOH . 
D 4 HOH A 86 191 88 HOH HOH . 
D 4 HOH A 87 192 89 HOH HOH . 
D 4 HOH A 88 193 90 HOH HOH . 
D 4 HOH A 89 194 91 HOH HOH . 
D 4 HOH A 90 195 92 HOH HOH . 
D 4 HOH A 91 196 93 HOH HOH . 
D 4 HOH A 92 197 94 HOH HOH . 
D 4 HOH A 93 198 95 HOH HOH . 
D 4 HOH A 94 199 96 HOH HOH . 
D 4 HOH A 95 200 97 HOH HOH . 
D 4 HOH A 96 201 98 HOH HOH . 
D 4 HOH A 97 202 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MRD . . . B 2 26.324 16.327 53.295 1 39.09 ? C1 MRD 104 A 1 
HETATM 2 C C2 MRD . . . B 2 27.038 17.571 53.814 1 49.33 ? C2 MRD 104 A 1 
HETATM 3 O O2 MRD . . . B 2 27.605 18.259 52.655 1 53.36 ? O2 MRD 104 A 1 
HETATM 4 C CM MRD . . . B 2 26.05 18.437 54.59 1 36.31 ? CM MRD 104 A 1 
HETATM 5 C C3 MRD . . . B 2 28.134 17.165 54.778 1 51.52 ? C3 MRD 104 A 1 
HETATM 6 C C4 MRD . . . B 2 27.584 16.025 55.616 1 57.05 ? C4 MRD 104 A 1 
HETATM 7 O O4 MRD . . . B 2 26.222 16.276 55.854 1 60.25 ? O4 MRD 104 A 1 
HETATM 8 C C5 MRD . . . B 2 28.304 15.848 56.942 1 54.15 ? C5 MRD 104 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           8 
#