data_3CFL # _model_server_result.job_id 0T4fSGeuo_Z34fM2tD8RkA _model_server_result.datetime_utc '2024-11-09 01:57:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cfl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":4}' # _entry.id 3CFL # _exptl.entry_id 3CFL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.97 _cell.angle_gamma 90 _cell.entry_id 3CFL _cell.length_a 63.514 _cell.length_b 50.395 _cell.length_c 65.863 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CFL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG B 1 NAG 2 n B NAG 2 B 2 NAG B 2 NAG 2 n C NAG 1 C 1 NAG C 1 NAG 2 n C NAG 2 C 2 NAG C 2 NAG 2 n D NAG 1 D 1 NAG D 1 NAG 2 n D NAG 2 D 2 NAG D 2 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 348 1_555 A SG CYS 39 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 17 A CYS 358 1_555 A SG CYS 30 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 A SG CYS 64 A CYS 405 1_555 A SG CYS 343 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 84 A CYS 425 1_555 A SG CYS 306 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf5 A SG CYS 116 A CYS 457 1_555 A SG CYS 191 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 A SG CYS 140 A CYS 481 1_555 A SG CYS 334 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf7 A SG CYS 150 A CYS 491 1_555 A SG CYS 164 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf8 A SG CYS 161 A CYS 502 1_555 A SG CYS 174 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? disulf ? disulf9 A SG CYS 232 A CYS 573 1_555 A SG CYS 246 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf10 A SG CYS 284 A CYS 625 1_555 A SG CYS 289 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? covale ? covale1 A ND2 ASN 27 A ASN 368 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale2 A ND2 ASN 135 A ASN 476 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale3 A ND2 ASN 204 A ASN 545 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale4 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale5 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale6 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? metalc ? metalc1 G ZN ZN . A ZN 3 1_555 A OE2 GLU 318 A GLU 659 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc2 G ZN ZN . A ZN 3 1_555 K O HOH . A HOH 827 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc3 H ZN ZN . A ZN 4 1_555 A NE2 HIS 247 A HIS 588 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc4 A OD1 ASP 54 A ASP 395 1_555 E FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc5 A OH TYR 92 A TYR 433 1_555 E FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? metalc ? metalc6 A OH TYR 185 A TYR 526 1_555 E FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc7 A NE2 HIS 254 A HIS 595 1_555 E FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc8 E FE FE . A FE 691 1_555 F O2 CO3 . A CO3 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc9 E FE FE . A FE 691 1_555 F O1 CO3 . A CO3 692 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CFL _atom_sites.fract_transf_matrix[1][1] 0.015745 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005107 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019843 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FE A 1 691 1 FE FE . F 4 CO3 A 1 692 2 CO3 CO3 . G 5 ZN A 1 3 3 ZN ZN . H 5 ZN A 1 4 4 ZN ZN . I 6 SO4 A 1 5 5 SO4 SO4 . J 7 5CH A 1 693 1 5CH UNK . K 8 HOH A 1 694 1 HOH HOH . K 8 HOH A 2 695 2 HOH HOH . K 8 HOH A 3 696 3 HOH HOH . K 8 HOH A 4 697 4 HOH HOH . K 8 HOH A 5 698 5 HOH HOH . K 8 HOH A 6 699 6 HOH HOH . K 8 HOH A 7 700 7 HOH HOH . K 8 HOH A 8 701 8 HOH HOH . K 8 HOH A 9 702 9 HOH HOH . K 8 HOH A 10 703 10 HOH HOH . K 8 HOH A 11 704 11 HOH HOH . K 8 HOH A 12 705 12 HOH HOH . K 8 HOH A 13 706 13 HOH HOH . K 8 HOH A 14 707 14 HOH HOH . K 8 HOH A 15 708 15 HOH HOH . K 8 HOH A 16 709 16 HOH HOH . K 8 HOH A 17 710 17 HOH HOH . K 8 HOH A 18 711 18 HOH HOH . K 8 HOH A 19 712 19 HOH HOH . K 8 HOH A 20 713 20 HOH HOH . K 8 HOH A 21 714 21 HOH HOH . K 8 HOH A 22 715 22 HOH HOH . K 8 HOH A 23 716 23 HOH HOH . K 8 HOH A 24 717 24 HOH HOH . K 8 HOH A 25 718 25 HOH HOH . K 8 HOH A 26 719 26 HOH HOH . K 8 HOH A 27 720 27 HOH HOH . K 8 HOH A 28 721 28 HOH HOH . K 8 HOH A 29 722 29 HOH HOH . K 8 HOH A 30 723 30 HOH HOH . K 8 HOH A 31 724 31 HOH HOH . K 8 HOH A 32 725 32 HOH HOH . K 8 HOH A 33 726 33 HOH HOH . K 8 HOH A 34 727 34 HOH HOH . K 8 HOH A 35 728 35 HOH HOH . K 8 HOH A 36 729 36 HOH HOH . K 8 HOH A 37 730 37 HOH HOH . K 8 HOH A 38 731 38 HOH HOH . K 8 HOH A 39 732 39 HOH HOH . K 8 HOH A 40 733 40 HOH HOH . K 8 HOH A 41 734 41 HOH HOH . K 8 HOH A 42 735 42 HOH HOH . K 8 HOH A 43 736 43 HOH HOH . K 8 HOH A 44 737 44 HOH HOH . K 8 HOH A 45 738 45 HOH HOH . K 8 HOH A 46 739 46 HOH HOH . K 8 HOH A 47 740 48 HOH HOH . K 8 HOH A 48 741 49 HOH HOH . K 8 HOH A 49 742 50 HOH HOH . K 8 HOH A 50 743 51 HOH HOH . K 8 HOH A 51 744 52 HOH HOH . K 8 HOH A 52 745 53 HOH HOH . K 8 HOH A 53 746 54 HOH HOH . K 8 HOH A 54 747 55 HOH HOH . K 8 HOH A 55 748 56 HOH HOH . K 8 HOH A 56 749 57 HOH HOH . K 8 HOH A 57 750 58 HOH HOH . K 8 HOH A 58 751 60 HOH HOH . K 8 HOH A 59 752 61 HOH HOH . K 8 HOH A 60 753 62 HOH HOH . K 8 HOH A 61 754 63 HOH HOH . K 8 HOH A 62 755 64 HOH HOH . K 8 HOH A 63 756 65 HOH HOH . K 8 HOH A 64 757 66 HOH HOH . K 8 HOH A 65 758 67 HOH HOH . K 8 HOH A 66 759 69 HOH HOH . K 8 HOH A 67 760 70 HOH HOH . K 8 HOH A 68 761 71 HOH HOH . K 8 HOH A 69 762 72 HOH HOH . K 8 HOH A 70 763 73 HOH HOH . K 8 HOH A 71 764 74 HOH HOH . K 8 HOH A 72 765 75 HOH HOH . K 8 HOH A 73 766 76 HOH HOH . K 8 HOH A 74 767 77 HOH HOH . K 8 HOH A 75 768 78 HOH HOH . K 8 HOH A 76 769 79 HOH HOH . K 8 HOH A 77 770 80 HOH HOH . K 8 HOH A 78 771 81 HOH HOH . K 8 HOH A 79 772 82 HOH HOH . K 8 HOH A 80 773 83 HOH HOH . K 8 HOH A 81 774 84 HOH HOH . K 8 HOH A 82 775 85 HOH HOH . K 8 HOH A 83 776 86 HOH HOH . K 8 HOH A 84 777 87 HOH HOH . K 8 HOH A 85 778 88 HOH HOH . K 8 HOH A 86 779 89 HOH HOH . K 8 HOH A 87 780 90 HOH HOH . K 8 HOH A 88 781 91 HOH HOH . K 8 HOH A 89 782 92 HOH HOH . K 8 HOH A 90 783 93 HOH HOH . K 8 HOH A 91 784 95 HOH HOH . K 8 HOH A 92 785 96 HOH HOH . K 8 HOH A 93 786 97 HOH HOH . K 8 HOH A 94 787 98 HOH HOH . K 8 HOH A 95 788 99 HOH HOH . K 8 HOH A 96 789 100 HOH HOH . K 8 HOH A 97 790 102 HOH HOH . K 8 HOH A 98 791 103 HOH HOH . K 8 HOH A 99 792 104 HOH HOH . K 8 HOH A 100 793 105 HOH HOH . K 8 HOH A 101 794 106 HOH HOH . K 8 HOH A 102 795 107 HOH HOH . K 8 HOH A 103 796 109 HOH HOH . K 8 HOH A 104 797 110 HOH HOH . K 8 HOH A 105 798 111 HOH HOH . K 8 HOH A 106 799 112 HOH HOH . K 8 HOH A 107 800 116 HOH HOH . K 8 HOH A 108 801 119 HOH HOH . K 8 HOH A 109 802 120 HOH HOH . K 8 HOH A 110 803 121 HOH HOH . K 8 HOH A 111 804 125 HOH HOH . K 8 HOH A 112 805 126 HOH HOH . K 8 HOH A 113 806 127 HOH HOH . K 8 HOH A 114 807 128 HOH HOH . K 8 HOH A 115 808 129 HOH HOH . K 8 HOH A 116 809 133 HOH HOH . K 8 HOH A 117 810 135 HOH HOH . K 8 HOH A 118 811 136 HOH HOH . K 8 HOH A 119 812 138 HOH HOH . K 8 HOH A 120 813 139 HOH HOH . K 8 HOH A 121 814 140 HOH HOH . K 8 HOH A 122 815 141 HOH HOH . K 8 HOH A 123 816 142 HOH HOH . K 8 HOH A 124 817 143 HOH HOH . K 8 HOH A 125 818 144 HOH HOH . K 8 HOH A 126 819 145 HOH HOH . K 8 HOH A 127 820 146 HOH HOH . K 8 HOH A 128 821 148 HOH HOH . K 8 HOH A 129 822 149 HOH HOH . K 8 HOH A 130 823 150 HOH HOH . K 8 HOH A 131 824 151 HOH HOH . K 8 HOH A 132 825 154 HOH HOH . K 8 HOH A 133 826 156 HOH HOH . K 8 HOH A 134 827 157 HOH HOH . K 8 HOH A 135 828 158 HOH HOH . K 8 HOH A 136 829 159 HOH HOH . K 8 HOH A 137 830 160 HOH HOH . K 8 HOH A 138 831 161 HOH HOH . K 8 HOH A 139 832 162 HOH HOH . K 8 HOH A 140 833 164 HOH HOH . K 8 HOH A 141 834 165 HOH HOH . K 8 HOH A 142 835 167 HOH HOH . K 8 HOH A 143 836 168 HOH HOH . K 8 HOH A 144 837 169 HOH HOH . K 8 HOH A 145 838 171 HOH HOH . K 8 HOH A 146 839 173 HOH HOH . K 8 HOH A 147 840 174 HOH HOH . K 8 HOH A 148 841 176 HOH HOH . K 8 HOH A 149 842 178 HOH HOH . K 8 HOH A 150 843 180 HOH HOH . K 8 HOH A 151 844 186 HOH HOH . K 8 HOH A 152 845 189 HOH HOH . K 8 HOH A 153 846 193 HOH HOH . K 8 HOH A 154 847 194 HOH HOH . K 8 HOH A 155 848 195 HOH HOH . K 8 HOH A 156 849 200 HOH HOH . K 8 HOH A 157 850 202 HOH HOH . K 8 HOH A 158 851 204 HOH HOH . K 8 HOH A 159 852 207 HOH HOH . K 8 HOH A 160 853 212 HOH HOH . K 8 HOH A 161 854 214 HOH HOH . K 8 HOH A 162 855 218 HOH HOH . K 8 HOH A 163 856 220 HOH HOH . K 8 HOH A 164 857 222 HOH HOH . K 8 HOH A 165 858 225 HOH HOH . K 8 HOH A 166 859 229 HOH HOH . K 8 HOH A 167 860 230 HOH HOH . K 8 HOH A 168 861 232 HOH HOH . K 8 HOH A 169 862 233 HOH HOH . K 8 HOH A 170 863 234 HOH HOH . K 8 HOH A 171 864 235 HOH HOH . K 8 HOH A 172 865 237 HOH HOH . K 8 HOH A 173 866 238 HOH HOH . K 8 HOH A 174 867 241 HOH HOH . K 8 HOH A 175 868 242 HOH HOH . K 8 HOH A 176 869 247 HOH HOH . K 8 HOH A 177 870 251 HOH HOH . K 8 HOH A 178 871 255 HOH HOH . K 8 HOH A 179 872 256 HOH HOH . K 8 HOH A 180 873 260 HOH HOH . K 8 HOH A 181 874 261 HOH HOH . K 8 HOH A 182 875 264 HOH HOH . K 8 HOH A 183 876 266 HOH HOH . K 8 HOH A 184 877 267 HOH HOH . K 8 HOH A 185 878 271 HOH HOH . K 8 HOH A 186 879 274 HOH HOH . K 8 HOH A 187 880 275 HOH HOH . K 8 HOH A 188 881 276 HOH HOH . K 8 HOH A 189 882 277 HOH HOH . K 8 HOH A 190 883 293 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x -28.575 _atom_site.Cartn_y 10.7 _atom_site.Cartn_z 7.256 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 4 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #