data_3CGF # _model_server_result.job_id TvwynY97Jqg-CFmV0ceblQ _model_server_result.datetime_utc '2024-11-04 22:17:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cgf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":523}' # _entry.id 3CGF # _exptl.entry_id 3CGF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.393 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-cyclohexyl-4-imidazo[1,2-a]pyridin-3-yl-N-methylpyrimidin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CGF _cell.length_a 52.17 _cell.length_b 71.37 _cell.length_c 107.57 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CGF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H21 N5' _chem_comp.formula_weight 307.393 _chem_comp.id JNF _chem_comp.mon_nstd_flag . _chem_comp.name N-cyclohexyl-4-imidazo[1,2-a]pyridin-3-yl-N-methylpyrimidin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 JNF sing 171 n n N02 C03 JNF sing 172 n n N02 C18 JNF sing 173 n n C03 N04 JNF doub 174 n y C03 N17 JNF sing 175 n y N04 C05 JNF sing 176 n y C05 C06 JNF sing 177 n y C05 C15 JNF doub 178 n y C06 N07 JNF sing 179 n y C06 C14 JNF doub 180 n y N07 C08 JNF sing 181 n y N07 C12 JNF sing 182 n y C08 C09 JNF sing 183 n y C08 N13 JNF doub 184 n y C09 C10 JNF doub 185 n y C10 C11 JNF sing 186 n y C11 C12 JNF doub 187 n y N13 C14 JNF sing 188 n y C15 C16 JNF sing 189 n y C16 N17 JNF doub 190 n y C18 C19 JNF sing 191 n n C18 C23 JNF sing 192 n n C19 C20 JNF sing 193 n n C20 C21 JNF sing 194 n n C21 C22 JNF sing 195 n n C22 C23 JNF sing 196 n n C01 H01 JNF sing 197 n n C01 H01A JNF sing 198 n n C01 H01B JNF sing 199 n n C09 H09 JNF sing 200 n n C10 H10 JNF sing 201 n n C11 H11 JNF sing 202 n n C12 H12 JNF sing 203 n n C14 H14 JNF sing 204 n n C15 H15 JNF sing 205 n n C16 H16 JNF sing 206 n n C18 H18 JNF sing 207 n n C19 H19 JNF sing 208 n n C19 H19A JNF sing 209 n n C20 H20 JNF sing 210 n n C20 H20A JNF sing 211 n n C21 H21 JNF sing 212 n n C21 H21A JNF sing 213 n n C22 H22 JNF sing 214 n n C22 H22A JNF sing 215 n n C23 H23 JNF sing 216 n n C23 H23A JNF sing 217 n n # _atom_sites.entry_id 3CGF _atom_sites.fract_transf_matrix[1][1] 0.019168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014011 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id JNF _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 523 _pdbx_nonpoly_scheme.auth_seq_num 523 _pdbx_nonpoly_scheme.pdb_mon_id JNF _pdbx_nonpoly_scheme.auth_mon_id J23 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 JNF . . . B 2 23.398 14.412 31.435 1 24.47 ? C01 JNF 523 A 1 HETATM 2 N N02 JNF . . . B 2 23.46 12.94 31.458 1 29.93 ? N02 JNF 523 A 1 HETATM 3 C C03 JNF . . . B 2 22.203 12.342 31.92 1 30.06 ? C03 JNF 523 A 1 HETATM 4 N N04 JNF . . . B 2 22.02 10.945 31.939 1 24.82 ? N04 JNF 523 A 1 HETATM 5 C C05 JNF . . . B 2 20.81 10.441 32.423 1 23.16 ? C05 JNF 523 A 1 HETATM 6 C C06 JNF . . . B 2 20.637 8.973 32.402 1 23.84 ? C06 JNF 523 A 1 HETATM 7 N N07 JNF . . . B 2 21.554 8.026 31.958 1 25.52 ? N07 JNF 523 A 1 HETATM 8 C C08 JNF . . . B 2 20.947 6.75 32.14 1 23.87 ? C08 JNF 523 A 1 HETATM 9 C C09 JNF . . . B 2 21.712 5.594 31.742 1 29.13 ? C09 JNF 523 A 1 HETATM 10 C C10 JNF . . . B 2 22.968 5.759 31.218 1 33.12 ? C10 JNF 523 A 1 HETATM 11 C C11 JNF . . . B 2 23.568 7.092 31.04 1 30.04 ? C11 JNF 523 A 1 HETATM 12 C C12 JNF . . . B 2 22.854 8.182 31.413 1 28.24 ? C12 JNF 523 A 1 HETATM 13 N N13 JNF . . . B 2 19.75 6.843 32.651 1 19.64 ? N13 JNF 523 A 1 HETATM 14 C C14 JNF . . . B 2 19.546 8.198 32.821 1 22.63 ? C14 JNF 523 A 1 HETATM 15 C C15 JNF . . . B 2 19.779 11.25 32.893 1 26.59 ? C15 JNF 523 A 1 HETATM 16 C C16 JNF . . . B 2 20.037 12.623 32.849 1 32.68 ? C16 JNF 523 A 1 HETATM 17 N N17 JNF . . . B 2 21.206 13.187 32.376 1 31.19 ? N17 JNF 523 A 1 HETATM 18 C C18 JNF . . . B 2 24.081 12.355 30.226 1 30.58 ? C18 JNF 523 A 1 HETATM 19 C C19 JNF . . . B 2 23.153 12.186 28.994 1 35.5 ? C19 JNF 523 A 1 HETATM 20 C C20 JNF . . . B 2 23.91 11.585 27.79 1 36.22 ? C20 JNF 523 A 1 HETATM 21 C C21 JNF . . . B 2 24.521 10.209 28.12 1 37.83 ? C21 JNF 523 A 1 HETATM 22 C C22 JNF . . . B 2 25.419 10.26 29.364 1 37.02 ? C22 JNF 523 A 1 HETATM 23 C C23 JNF . . . B 2 24.743 10.979 30.565 1 33.2 ? C23 JNF 523 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #