data_3CGT # _model_server_result.job_id m_Mas7JmCLraOBCofKKHyQ _model_server_result.datetime_utc '2024-11-09 02:17:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cgt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":686}' # _entry.id 3CGT # _exptl.entry_id 3CGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CGT _cell.length_a 94.5 _cell.length_b 105 _cell.length_c 113.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 1 7 GLC GLC C1 O1 . O4 HO4 . sing 2 ? 2 2 1 GLC GLC C1 O1 . O4 HO4 . sing 3 ? 2 3 2 GLC GLC C1 O1 . O4 HO4 . sing 4 ? 2 4 3 GLC GLC C1 O1 . O4 HO4 . sing 5 ? 2 5 4 GLC GLC C1 O1 . O4 HO4 . sing 6 ? 2 6 5 GLC GLC C1 O1 . O4 HO4 . sing 7 ? 2 7 6 GLC GLC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B GLC 1 B 1 GLC ? 701 BCD 2 n B GLC 2 B 2 GLC ? 701 BCD 2 n B GLC 3 B 3 GLC ? 701 BCD 2 n B GLC 4 B 4 GLC ? 701 BCD 2 n B GLC 5 B 5 GLC ? 701 BCD 2 n B GLC 6 B 6 GLC ? 701 BCD 2 n B GLC 7 B 7 GLC ? 701 BCD # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 43 A CYS 43 1_555 A SG CYS 50 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? covale ? covale1 B O4 GLC . B GLC 1 1_555 B C1 GLC . B GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 sing covale ? covale2 B C1 GLC . B GLC 1 1_555 B O4 GLC . B GLC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.414 sing covale ? covale3 B O4 GLC . B GLC 2 1_555 B C1 GLC . B GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 sing covale ? covale4 B O4 GLC . B GLC 3 1_555 B C1 GLC . B GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.402 sing covale ? covale5 B O4 GLC . B GLC 4 1_555 B C1 GLC . B GLC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 sing covale ? covale6 B O4 GLC . B GLC 5 1_555 B C1 GLC . B GLC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.412 sing covale ? covale7 B O4 GLC . B GLC 6 1_555 B C1 GLC . B GLC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.41 sing metalc ? metalc1 A OD1 ASP 27 A ASP 27 1_555 D CA CA . A CA 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc2 A O ASN 29 A ASN 29 1_555 D CA CA . A CA 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc3 A OD1 ASN 32 A ASN 32 1_555 D CA CA . A CA 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc4 A OD1 ASN 33 A ASN 33 1_555 D CA CA . A CA 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc5 A O GLY 51 A GLY 51 1_555 D CA CA . A CA 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc6 A OD2 ASP 53 A ASP 53 1_555 D CA CA . A CA 686 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc7 A OD1 ASN 139 A ASN 139 1_555 C CA CA . A CA 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc8 A O ILE 190 A ILE 190 1_555 C CA CA . A CA 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc9 A OD1 ASP 199 A ASP 199 1_555 C CA CA . A CA 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc10 A OD2 ASP 199 A ASP 199 1_555 C CA CA . A CA 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc11 A O HIS 233 A HIS 233 1_555 C CA CA . A CA 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc12 C CA CA . A CA 685 1_555 E O HOH . A HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CGT _atom_sites.fract_transf_matrix[1][1] 0.010582 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 685 685 CA CA . D 3 CA A 1 686 686 CA CA . E 4 HOH A 1 702 1 HOH HOH . E 4 HOH A 2 703 2 HOH HOH . E 4 HOH A 3 704 3 HOH HOH . E 4 HOH A 4 705 4 HOH HOH . E 4 HOH A 5 706 5 HOH HOH . E 4 HOH A 6 707 6 HOH HOH . E 4 HOH A 7 708 7 HOH HOH . E 4 HOH A 8 709 8 HOH HOH . E 4 HOH A 9 710 9 HOH HOH . E 4 HOH A 10 711 10 HOH HOH . E 4 HOH A 11 712 11 HOH HOH . E 4 HOH A 12 713 12 HOH HOH . E 4 HOH A 13 714 13 HOH HOH . E 4 HOH A 14 715 14 HOH HOH . E 4 HOH A 15 716 15 HOH HOH . E 4 HOH A 16 717 16 HOH HOH . E 4 HOH A 17 718 17 HOH HOH . E 4 HOH A 18 719 18 HOH HOH . E 4 HOH A 19 720 19 HOH HOH . E 4 HOH A 20 721 20 HOH HOH . E 4 HOH A 21 722 21 HOH HOH . E 4 HOH A 22 723 22 HOH HOH . E 4 HOH A 23 724 23 HOH HOH . E 4 HOH A 24 725 24 HOH HOH . E 4 HOH A 25 726 25 HOH HOH . E 4 HOH A 26 727 26 HOH HOH . E 4 HOH A 27 728 27 HOH HOH . E 4 HOH A 28 729 28 HOH HOH . E 4 HOH A 29 730 29 HOH HOH . E 4 HOH A 30 731 30 HOH HOH . E 4 HOH A 31 732 31 HOH HOH . E 4 HOH A 32 733 32 HOH HOH . E 4 HOH A 33 734 33 HOH HOH . E 4 HOH A 34 735 34 HOH HOH . E 4 HOH A 35 736 35 HOH HOH . E 4 HOH A 36 737 36 HOH HOH . E 4 HOH A 37 738 37 HOH HOH . E 4 HOH A 38 739 38 HOH HOH . E 4 HOH A 39 740 39 HOH HOH . E 4 HOH A 40 741 40 HOH HOH . E 4 HOH A 41 742 41 HOH HOH . E 4 HOH A 42 743 42 HOH HOH . E 4 HOH A 43 744 43 HOH HOH . E 4 HOH A 44 745 44 HOH HOH . E 4 HOH A 45 746 45 HOH HOH . E 4 HOH A 46 747 46 HOH HOH . E 4 HOH A 47 748 47 HOH HOH . E 4 HOH A 48 749 48 HOH HOH . E 4 HOH A 49 750 49 HOH HOH . E 4 HOH A 50 751 50 HOH HOH . E 4 HOH A 51 752 51 HOH HOH . E 4 HOH A 52 753 52 HOH HOH . E 4 HOH A 53 754 53 HOH HOH . E 4 HOH A 54 755 54 HOH HOH . E 4 HOH A 55 756 55 HOH HOH . E 4 HOH A 56 757 56 HOH HOH . E 4 HOH A 57 758 57 HOH HOH . E 4 HOH A 58 759 58 HOH HOH . E 4 HOH A 59 760 59 HOH HOH . E 4 HOH A 60 761 60 HOH HOH . E 4 HOH A 61 762 61 HOH HOH . E 4 HOH A 62 763 62 HOH HOH . E 4 HOH A 63 764 63 HOH HOH . E 4 HOH A 64 765 64 HOH HOH . E 4 HOH A 65 766 65 HOH HOH . E 4 HOH A 66 767 66 HOH HOH . E 4 HOH A 67 768 67 HOH HOH . E 4 HOH A 68 769 68 HOH HOH . E 4 HOH A 69 770 69 HOH HOH . E 4 HOH A 70 771 70 HOH HOH . E 4 HOH A 71 772 71 HOH HOH . E 4 HOH A 72 773 72 HOH HOH . E 4 HOH A 73 774 73 HOH HOH . E 4 HOH A 74 775 74 HOH HOH . E 4 HOH A 75 776 75 HOH HOH . E 4 HOH A 76 777 76 HOH HOH . E 4 HOH A 77 778 77 HOH HOH . E 4 HOH A 78 779 78 HOH HOH . E 4 HOH A 79 780 79 HOH HOH . E 4 HOH A 80 781 80 HOH HOH . E 4 HOH A 81 782 81 HOH HOH . E 4 HOH A 82 783 82 HOH HOH . E 4 HOH A 83 784 83 HOH HOH . E 4 HOH A 84 785 84 HOH HOH . E 4 HOH A 85 786 85 HOH HOH . E 4 HOH A 86 787 86 HOH HOH . E 4 HOH A 87 788 87 HOH HOH . E 4 HOH A 88 789 88 HOH HOH . E 4 HOH A 89 790 89 HOH HOH . E 4 HOH A 90 791 90 HOH HOH . E 4 HOH A 91 792 91 HOH HOH . E 4 HOH A 92 793 92 HOH HOH . E 4 HOH A 93 794 93 HOH HOH . E 4 HOH A 94 795 94 HOH HOH . E 4 HOH A 95 796 95 HOH HOH . E 4 HOH A 96 797 96 HOH HOH . E 4 HOH A 97 798 97 HOH HOH . E 4 HOH A 98 799 98 HOH HOH . E 4 HOH A 99 800 99 HOH HOH . E 4 HOH A 100 801 100 HOH HOH . E 4 HOH A 101 802 101 HOH HOH . E 4 HOH A 102 803 102 HOH HOH . E 4 HOH A 103 804 103 HOH HOH . E 4 HOH A 104 805 104 HOH HOH . E 4 HOH A 105 806 105 HOH HOH . E 4 HOH A 106 807 106 HOH HOH . E 4 HOH A 107 808 107 HOH HOH . E 4 HOH A 108 809 108 HOH HOH . E 4 HOH A 109 810 109 HOH HOH . E 4 HOH A 110 811 110 HOH HOH . E 4 HOH A 111 812 111 HOH HOH . E 4 HOH A 112 813 112 HOH HOH . E 4 HOH A 113 814 113 HOH HOH . E 4 HOH A 114 815 114 HOH HOH . E 4 HOH A 115 816 115 HOH HOH . E 4 HOH A 116 817 116 HOH HOH . E 4 HOH A 117 818 117 HOH HOH . E 4 HOH A 118 819 118 HOH HOH . E 4 HOH A 119 820 119 HOH HOH . E 4 HOH A 120 821 120 HOH HOH . E 4 HOH A 121 822 121 HOH HOH . E 4 HOH A 122 823 122 HOH HOH . E 4 HOH A 123 824 123 HOH HOH . E 4 HOH A 124 825 124 HOH HOH . E 4 HOH A 125 826 125 HOH HOH . E 4 HOH A 126 827 126 HOH HOH . E 4 HOH A 127 828 127 HOH HOH . E 4 HOH A 128 829 128 HOH HOH . E 4 HOH A 129 830 129 HOH HOH . E 4 HOH A 130 831 130 HOH HOH . E 4 HOH A 131 832 131 HOH HOH . E 4 HOH A 132 833 132 HOH HOH . E 4 HOH A 133 834 133 HOH HOH . E 4 HOH A 134 835 134 HOH HOH . E 4 HOH A 135 836 135 HOH HOH . E 4 HOH A 136 837 136 HOH HOH . E 4 HOH A 137 838 137 HOH HOH . E 4 HOH A 138 839 138 HOH HOH . E 4 HOH A 139 840 139 HOH HOH . E 4 HOH A 140 841 140 HOH HOH . E 4 HOH A 141 842 141 HOH HOH . E 4 HOH A 142 843 142 HOH HOH . E 4 HOH A 143 844 143 HOH HOH . E 4 HOH A 144 845 144 HOH HOH . E 4 HOH A 145 846 145 HOH HOH . E 4 HOH A 146 847 146 HOH HOH . E 4 HOH A 147 848 147 HOH HOH . E 4 HOH A 148 849 148 HOH HOH . E 4 HOH A 149 850 149 HOH HOH . E 4 HOH A 150 851 150 HOH HOH . E 4 HOH A 151 852 151 HOH HOH . E 4 HOH A 152 853 152 HOH HOH . E 4 HOH A 153 854 153 HOH HOH . E 4 HOH A 154 855 154 HOH HOH . E 4 HOH A 155 856 155 HOH HOH . E 4 HOH A 156 857 156 HOH HOH . E 4 HOH A 157 858 157 HOH HOH . E 4 HOH A 158 859 158 HOH HOH . E 4 HOH A 159 860 159 HOH HOH . E 4 HOH A 160 861 160 HOH HOH . E 4 HOH A 161 862 161 HOH HOH . E 4 HOH A 162 863 162 HOH HOH . E 4 HOH A 163 864 163 HOH HOH . E 4 HOH A 164 865 164 HOH HOH . E 4 HOH A 165 866 165 HOH HOH . E 4 HOH A 166 867 166 HOH HOH . E 4 HOH A 167 868 167 HOH HOH . E 4 HOH A 168 869 168 HOH HOH . E 4 HOH A 169 870 169 HOH HOH . E 4 HOH A 170 871 170 HOH HOH . E 4 HOH A 171 872 171 HOH HOH . E 4 HOH A 172 873 172 HOH HOH . E 4 HOH A 173 874 173 HOH HOH . E 4 HOH A 174 875 174 HOH HOH . E 4 HOH A 175 876 175 HOH HOH . E 4 HOH A 176 877 176 HOH HOH . E 4 HOH A 177 878 177 HOH HOH . E 4 HOH A 178 879 178 HOH HOH . E 4 HOH A 179 880 179 HOH HOH . E 4 HOH A 180 881 180 HOH HOH . E 4 HOH A 181 882 181 HOH HOH . E 4 HOH A 182 883 182 HOH HOH . E 4 HOH A 183 884 183 HOH HOH . E 4 HOH A 184 885 184 HOH HOH . E 4 HOH A 185 886 185 HOH HOH . E 4 HOH A 186 887 186 HOH HOH . E 4 HOH A 187 888 187 HOH HOH . E 4 HOH A 188 889 188 HOH HOH . E 4 HOH A 189 890 189 HOH HOH . E 4 HOH A 190 891 190 HOH HOH . E 4 HOH A 191 892 191 HOH HOH . E 4 HOH A 192 893 192 HOH HOH . E 4 HOH A 193 894 193 HOH HOH . E 4 HOH A 194 895 194 HOH HOH . E 4 HOH A 195 896 195 HOH HOH . E 4 HOH A 196 897 196 HOH HOH . E 4 HOH A 197 898 197 HOH HOH . E 4 HOH A 198 899 198 HOH HOH . E 4 HOH A 199 900 199 HOH HOH . E 4 HOH A 200 901 200 HOH HOH . E 4 HOH A 201 902 201 HOH HOH . E 4 HOH A 202 903 202 HOH HOH . E 4 HOH A 203 904 203 HOH HOH . E 4 HOH A 204 905 204 HOH HOH . E 4 HOH A 205 906 205 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 67.504 _atom_site.Cartn_y -3.694 _atom_site.Cartn_z 28.329 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 686 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #