data_3CGX # _model_server_result.job_id 6itx2L5u7Wq2Q3OMx3h2Aw _model_server_result.datetime_utc '2024-11-29 13:53:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cgx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":242}' # _entry.id 3CGX # _exptl.entry_id 3CGX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CGX _cell.length_a 56.52 _cell.length_b 66.94 _cell.length_c 71.67 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CGX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 2 A MSE 1 1_555 A N SER 3 A SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C ALA 33 A ALA 32 1_555 A N MSE 34 A MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C MSE 34 A MSE 33 1_555 A N LEU 35 A LEU 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C ASP 42 A ASP 41 1_555 A N MSE 43 A MSE 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale5 A C MSE 43 A MSE 42 1_555 A N LEU 44 A LEU 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale6 A C HIS 77 A HIS 76 1_555 A N MSE 78 A MSE 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 A C MSE 78 A MSE 77 1_555 A N PHE 79 A PHE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 A C ARG 90 A ARG 89 1_555 A N MSE 91 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C MSE 91 A MSE 90 1_555 A N LYS 92 A LYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale10 A C ALA 94 A ALA 93 1_555 A N MSE 95 A MSE 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale11 A C MSE 95 A MSE 94 1_555 A N GLN 96 A GLN 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 A C LEU 108 A LEU 107 1_555 A N MSE 109 A MSE 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale13 A C MSE 109 A MSE 108 1_555 A N GLY 110 A GLY 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale14 A C LYS 175 A LYS 174 1_555 A N MSE 176 A MSE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale15 A C MSE 176 A MSE 175 1_555 A N ARG 177 A ARG 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 173 n y N1 C5 IMD sing 174 n y N1 HN1 IMD sing 175 n n C2 N3 IMD doub 176 n y C2 H2 IMD sing 177 n n N3 C4 IMD sing 178 n y N3 HN3 IMD sing 179 n n C4 C5 IMD doub 180 n y C4 H4 IMD sing 181 n n C5 H5 IMD sing 182 n n # _atom_sites.entry_id 3CGX _atom_sites.fract_transf_matrix[1][1] 0.017693 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 242 1 IMD IMD . C 3 HOH A 1 243 2 HOH HOH . C 3 HOH A 2 244 3 HOH HOH . C 3 HOH A 3 245 4 HOH HOH . C 3 HOH A 4 246 5 HOH HOH . C 3 HOH A 5 247 6 HOH HOH . C 3 HOH A 6 248 7 HOH HOH . C 3 HOH A 7 249 8 HOH HOH . C 3 HOH A 8 250 9 HOH HOH . C 3 HOH A 9 251 10 HOH HOH . C 3 HOH A 10 252 11 HOH HOH . C 3 HOH A 11 253 12 HOH HOH . C 3 HOH A 12 254 13 HOH HOH . C 3 HOH A 13 255 14 HOH HOH . C 3 HOH A 14 256 15 HOH HOH . C 3 HOH A 15 257 16 HOH HOH . C 3 HOH A 16 258 17 HOH HOH . C 3 HOH A 17 259 18 HOH HOH . C 3 HOH A 18 260 19 HOH HOH . C 3 HOH A 19 261 20 HOH HOH . C 3 HOH A 20 262 21 HOH HOH . C 3 HOH A 21 263 22 HOH HOH . C 3 HOH A 22 264 23 HOH HOH . C 3 HOH A 23 265 24 HOH HOH . C 3 HOH A 24 266 25 HOH HOH . C 3 HOH A 25 267 26 HOH HOH . C 3 HOH A 26 268 27 HOH HOH . C 3 HOH A 27 269 28 HOH HOH . C 3 HOH A 28 270 29 HOH HOH . C 3 HOH A 29 271 30 HOH HOH . C 3 HOH A 30 272 31 HOH HOH . C 3 HOH A 31 273 32 HOH HOH . C 3 HOH A 32 274 33 HOH HOH . C 3 HOH A 33 275 34 HOH HOH . C 3 HOH A 34 276 35 HOH HOH . C 3 HOH A 35 277 36 HOH HOH . C 3 HOH A 36 278 37 HOH HOH . C 3 HOH A 37 279 38 HOH HOH . C 3 HOH A 38 280 39 HOH HOH . C 3 HOH A 39 281 40 HOH HOH . C 3 HOH A 40 282 41 HOH HOH . C 3 HOH A 41 283 42 HOH HOH . C 3 HOH A 42 284 43 HOH HOH . C 3 HOH A 43 285 44 HOH HOH . C 3 HOH A 44 286 45 HOH HOH . C 3 HOH A 45 287 46 HOH HOH . C 3 HOH A 46 288 47 HOH HOH . C 3 HOH A 47 289 48 HOH HOH . C 3 HOH A 48 290 49 HOH HOH . C 3 HOH A 49 291 50 HOH HOH . C 3 HOH A 50 292 51 HOH HOH . C 3 HOH A 51 293 52 HOH HOH . C 3 HOH A 52 294 53 HOH HOH . C 3 HOH A 53 295 54 HOH HOH . C 3 HOH A 54 296 55 HOH HOH . C 3 HOH A 55 297 56 HOH HOH . C 3 HOH A 56 298 57 HOH HOH . C 3 HOH A 57 299 58 HOH HOH . C 3 HOH A 58 300 59 HOH HOH . C 3 HOH A 59 301 60 HOH HOH . C 3 HOH A 60 302 61 HOH HOH . C 3 HOH A 61 303 62 HOH HOH . C 3 HOH A 62 304 63 HOH HOH . C 3 HOH A 63 305 64 HOH HOH . C 3 HOH A 64 306 65 HOH HOH . C 3 HOH A 65 307 66 HOH HOH . C 3 HOH A 66 308 67 HOH HOH . C 3 HOH A 67 309 68 HOH HOH . C 3 HOH A 68 310 69 HOH HOH . C 3 HOH A 69 311 70 HOH HOH . C 3 HOH A 70 312 71 HOH HOH . C 3 HOH A 71 313 72 HOH HOH . C 3 HOH A 72 314 73 HOH HOH . C 3 HOH A 73 315 74 HOH HOH . C 3 HOH A 74 316 75 HOH HOH . C 3 HOH A 75 317 76 HOH HOH . C 3 HOH A 76 318 77 HOH HOH . C 3 HOH A 77 319 78 HOH HOH . C 3 HOH A 78 320 79 HOH HOH . C 3 HOH A 79 321 80 HOH HOH . C 3 HOH A 80 322 81 HOH HOH . C 3 HOH A 81 323 82 HOH HOH . C 3 HOH A 82 324 83 HOH HOH . C 3 HOH A 83 325 84 HOH HOH . C 3 HOH A 84 326 85 HOH HOH . C 3 HOH A 85 327 86 HOH HOH . C 3 HOH A 86 328 87 HOH HOH . C 3 HOH A 87 329 88 HOH HOH . C 3 HOH A 88 330 89 HOH HOH . C 3 HOH A 89 331 90 HOH HOH . C 3 HOH A 90 332 91 HOH HOH . C 3 HOH A 91 333 92 HOH HOH . C 3 HOH A 92 334 93 HOH HOH . C 3 HOH A 93 335 94 HOH HOH . C 3 HOH A 94 336 95 HOH HOH . C 3 HOH A 95 337 96 HOH HOH . C 3 HOH A 96 338 97 HOH HOH . C 3 HOH A 97 339 98 HOH HOH . C 3 HOH A 98 340 99 HOH HOH . C 3 HOH A 99 341 100 HOH HOH . C 3 HOH A 100 342 101 HOH HOH . C 3 HOH A 101 343 102 HOH HOH . C 3 HOH A 102 344 103 HOH HOH . C 3 HOH A 103 345 104 HOH HOH . C 3 HOH A 104 346 105 HOH HOH . C 3 HOH A 105 347 106 HOH HOH . C 3 HOH A 106 348 107 HOH HOH . C 3 HOH A 107 349 108 HOH HOH . C 3 HOH A 108 350 109 HOH HOH . C 3 HOH A 109 351 110 HOH HOH . C 3 HOH A 110 352 111 HOH HOH . C 3 HOH A 111 353 112 HOH HOH . C 3 HOH A 112 354 113 HOH HOH . C 3 HOH A 113 355 114 HOH HOH . C 3 HOH A 114 356 115 HOH HOH . C 3 HOH A 115 357 116 HOH HOH . C 3 HOH A 116 358 117 HOH HOH . C 3 HOH A 117 359 118 HOH HOH . C 3 HOH A 118 360 119 HOH HOH . C 3 HOH A 119 361 120 HOH HOH . C 3 HOH A 120 362 121 HOH HOH . C 3 HOH A 121 363 122 HOH HOH . C 3 HOH A 122 364 123 HOH HOH . C 3 HOH A 123 365 124 HOH HOH . C 3 HOH A 124 366 125 HOH HOH . C 3 HOH A 125 367 126 HOH HOH . C 3 HOH A 126 368 127 HOH HOH . C 3 HOH A 127 369 128 HOH HOH . C 3 HOH A 128 370 129 HOH HOH . C 3 HOH A 129 371 130 HOH HOH . C 3 HOH A 130 372 131 HOH HOH . C 3 HOH A 131 373 132 HOH HOH . C 3 HOH A 132 374 133 HOH HOH . C 3 HOH A 133 375 134 HOH HOH . C 3 HOH A 134 376 135 HOH HOH . C 3 HOH A 135 377 136 HOH HOH . C 3 HOH A 136 378 137 HOH HOH . C 3 HOH A 137 379 138 HOH HOH . C 3 HOH A 138 380 139 HOH HOH . C 3 HOH A 139 381 140 HOH HOH . C 3 HOH A 140 382 141 HOH HOH . C 3 HOH A 141 383 142 HOH HOH . C 3 HOH A 142 384 143 HOH HOH . C 3 HOH A 143 385 144 HOH HOH . C 3 HOH A 144 386 145 HOH HOH . C 3 HOH A 145 387 146 HOH HOH . C 3 HOH A 146 388 147 HOH HOH . C 3 HOH A 147 389 148 HOH HOH . C 3 HOH A 148 390 149 HOH HOH . C 3 HOH A 149 391 150 HOH HOH . C 3 HOH A 150 392 151 HOH HOH . C 3 HOH A 151 393 152 HOH HOH . C 3 HOH A 152 394 153 HOH HOH . C 3 HOH A 153 395 154 HOH HOH . C 3 HOH A 154 396 155 HOH HOH . C 3 HOH A 155 397 156 HOH HOH . C 3 HOH A 156 398 157 HOH HOH . C 3 HOH A 157 399 158 HOH HOH . C 3 HOH A 158 400 159 HOH HOH . C 3 HOH A 159 401 160 HOH HOH . C 3 HOH A 160 402 161 HOH HOH . C 3 HOH A 161 403 162 HOH HOH . C 3 HOH A 162 404 163 HOH HOH . C 3 HOH A 163 405 164 HOH HOH . C 3 HOH A 164 406 165 HOH HOH . C 3 HOH A 165 407 166 HOH HOH . C 3 HOH A 166 408 167 HOH HOH . C 3 HOH A 167 409 168 HOH HOH . C 3 HOH A 168 410 169 HOH HOH . C 3 HOH A 169 411 170 HOH HOH . C 3 HOH A 170 412 171 HOH HOH . C 3 HOH A 171 413 172 HOH HOH . C 3 HOH A 172 414 173 HOH HOH . C 3 HOH A 173 415 174 HOH HOH . C 3 HOH A 174 416 175 HOH HOH . C 3 HOH A 175 417 176 HOH HOH . C 3 HOH A 176 418 177 HOH HOH . C 3 HOH A 177 419 178 HOH HOH . C 3 HOH A 178 420 179 HOH HOH . C 3 HOH A 179 421 180 HOH HOH . C 3 HOH A 180 422 181 HOH HOH . C 3 HOH A 181 423 182 HOH HOH . C 3 HOH A 182 424 183 HOH HOH . C 3 HOH A 183 425 184 HOH HOH . C 3 HOH A 184 426 185 HOH HOH . C 3 HOH A 185 427 186 HOH HOH . C 3 HOH A 186 428 187 HOH HOH . C 3 HOH A 187 429 188 HOH HOH . C 3 HOH A 188 430 189 HOH HOH . C 3 HOH A 189 431 190 HOH HOH . C 3 HOH A 190 432 191 HOH HOH . C 3 HOH A 191 433 192 HOH HOH . C 3 HOH A 192 434 193 HOH HOH . C 3 HOH A 193 435 194 HOH HOH . C 3 HOH A 194 436 195 HOH HOH . C 3 HOH A 195 437 196 HOH HOH . C 3 HOH A 196 438 197 HOH HOH . C 3 HOH A 197 439 198 HOH HOH . C 3 HOH A 198 440 199 HOH HOH . C 3 HOH A 199 441 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . B 2 31.959 27.337 -3.14 1 50.86 ? N1 IMD 242 A 1 HETATM 2 C C2 IMD . . . B 2 32.206 26.01 -3.149 1 50.62 ? C2 IMD 242 A 1 HETATM 3 N N3 IMD . . . B 2 32.534 25.603 -4.39 1 39.02 ? N3 IMD 242 A 1 HETATM 4 C C4 IMD . . . B 2 32.521 26.69 -5.186 1 50.83 ? C4 IMD 242 A 1 HETATM 5 C C5 IMD . . . B 2 32.152 27.78 -4.397 1 54.07 ? C5 IMD 242 A 1 # _model_server_stats.io_time_ms 116 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #