data_3CH3 # _model_server_result.job_id XmrXMV6T-JA1shG4iJGmcw _model_server_result.datetime_utc '2025-02-28 23:21:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ch3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":829}' # _entry.id 3CH3 # _exptl.entry_id 3CH3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.987 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIHYDROGENPHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3CH3 _cell.length_a 103.368 _cell.length_b 103.368 _cell.length_c 72.508 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CH3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 X CYS 567 1_555 A SG CYS 9 X CYS 572 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf2 A SG CYS 18 X CYS 581 1_555 A SG CYS 47 X CYS 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf3 A SG CYS 30 X CYS 593 1_555 A SG CYS 73 X CYS 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf4 A SG CYS 64 X CYS 627 1_555 A SG CYS 109 X CYS 672 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 A SG CYS 192 X CYS 755 1_555 A SG CYS 246 X CYS 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc1 B K K . X K 1 1_555 A O GLY 193 X GLY 756 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? metalc ? metalc2 B K K . X K 1 1_555 A OD1 ASP 194 X ASP 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc3 B K K . X K 1 1_555 D O1 2HP . X 2HP 830 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc4 B K K . X K 1 1_555 E O HOH . X HOH 876 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc5 B K K . X K 1 1_555 E O HOH . X HOH 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? # _chem_comp.formula 'H2 O4 P -1' _chem_comp.formula_weight 96.987 _chem_comp.id 2HP _chem_comp.mon_nstd_flag . _chem_comp.name 'DIHYDROGENPHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 2HP doub 1 n n P O2 2HP sing 2 n n P O3 2HP sing 3 n n P O4 2HP sing 4 n n O3 HO3 2HP sing 5 n n O4 HO4 2HP sing 6 n n # _atom_sites.entry_id 3CH3 _atom_sites.fract_transf_matrix[1][1] 0.009674 _atom_sites.fract_transf_matrix[1][2] 0.005585 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011171 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K X 1 1 1 K K . C 3 2HP X 1 829 1 2HP 2HP . D 3 2HP X 1 830 1 2HP 2HP . E 4 HOH X 1 831 1 HOH HOH . E 4 HOH X 2 832 2 HOH HOH . E 4 HOH X 3 833 3 HOH HOH . E 4 HOH X 4 834 4 HOH HOH . E 4 HOH X 5 835 5 HOH HOH . E 4 HOH X 6 836 6 HOH HOH . E 4 HOH X 7 837 7 HOH HOH . E 4 HOH X 8 838 8 HOH HOH . E 4 HOH X 9 839 9 HOH HOH . E 4 HOH X 10 840 10 HOH HOH . E 4 HOH X 11 841 11 HOH HOH . E 4 HOH X 12 842 12 HOH HOH . E 4 HOH X 13 843 13 HOH HOH . E 4 HOH X 14 844 14 HOH HOH . E 4 HOH X 15 845 15 HOH HOH . E 4 HOH X 16 846 16 HOH HOH . E 4 HOH X 17 847 17 HOH HOH . E 4 HOH X 18 848 18 HOH HOH . E 4 HOH X 19 849 19 HOH HOH . E 4 HOH X 20 850 20 HOH HOH . E 4 HOH X 21 851 21 HOH HOH . E 4 HOH X 22 852 22 HOH HOH . E 4 HOH X 23 853 23 HOH HOH . E 4 HOH X 24 854 25 HOH HOH . E 4 HOH X 25 855 26 HOH HOH . E 4 HOH X 26 856 27 HOH HOH . E 4 HOH X 27 857 28 HOH HOH . E 4 HOH X 28 858 29 HOH HOH . E 4 HOH X 29 859 30 HOH HOH . E 4 HOH X 30 860 31 HOH HOH . E 4 HOH X 31 861 32 HOH HOH . E 4 HOH X 32 862 33 HOH HOH . E 4 HOH X 33 863 34 HOH HOH . E 4 HOH X 34 864 35 HOH HOH . E 4 HOH X 35 865 36 HOH HOH . E 4 HOH X 36 866 37 HOH HOH . E 4 HOH X 37 867 38 HOH HOH . E 4 HOH X 38 868 39 HOH HOH . E 4 HOH X 39 869 40 HOH HOH . E 4 HOH X 40 870 41 HOH HOH . E 4 HOH X 41 871 42 HOH HOH . E 4 HOH X 42 872 43 HOH HOH . E 4 HOH X 43 873 44 HOH HOH . E 4 HOH X 44 874 45 HOH HOH . E 4 HOH X 45 875 46 HOH HOH . E 4 HOH X 46 876 47 HOH HOH . E 4 HOH X 47 877 48 HOH HOH . E 4 HOH X 48 878 49 HOH HOH . E 4 HOH X 49 879 50 HOH HOH . E 4 HOH X 50 880 51 HOH HOH . E 4 HOH X 51 881 52 HOH HOH . E 4 HOH X 52 882 53 HOH HOH . E 4 HOH X 53 883 54 HOH HOH . E 4 HOH X 54 884 55 HOH HOH . E 4 HOH X 55 885 56 HOH HOH . E 4 HOH X 56 886 57 HOH HOH . E 4 HOH X 57 887 58 HOH HOH . E 4 HOH X 58 888 59 HOH HOH . E 4 HOH X 59 889 60 HOH HOH . E 4 HOH X 60 890 61 HOH HOH . E 4 HOH X 61 891 62 HOH HOH . E 4 HOH X 62 892 63 HOH HOH . E 4 HOH X 63 893 64 HOH HOH . E 4 HOH X 64 894 65 HOH HOH . E 4 HOH X 65 895 66 HOH HOH . E 4 HOH X 66 896 67 HOH HOH . E 4 HOH X 67 897 68 HOH HOH . E 4 HOH X 68 898 69 HOH HOH . E 4 HOH X 69 899 70 HOH HOH . E 4 HOH X 70 900 71 HOH HOH . E 4 HOH X 71 901 72 HOH HOH . E 4 HOH X 72 902 73 HOH HOH . E 4 HOH X 73 903 74 HOH HOH . E 4 HOH X 74 904 75 HOH HOH . E 4 HOH X 75 905 76 HOH HOH . E 4 HOH X 76 906 77 HOH HOH . E 4 HOH X 77 907 78 HOH HOH . E 4 HOH X 78 908 79 HOH HOH . E 4 HOH X 79 909 80 HOH HOH . E 4 HOH X 80 910 81 HOH HOH . E 4 HOH X 81 911 82 HOH HOH . E 4 HOH X 82 912 83 HOH HOH . E 4 HOH X 83 913 84 HOH HOH . E 4 HOH X 84 914 85 HOH HOH . E 4 HOH X 85 915 86 HOH HOH . E 4 HOH X 86 916 87 HOH HOH . E 4 HOH X 87 917 88 HOH HOH . E 4 HOH X 88 918 89 HOH HOH . E 4 HOH X 89 919 90 HOH HOH . E 4 HOH X 90 920 91 HOH HOH . E 4 HOH X 91 921 92 HOH HOH . E 4 HOH X 92 922 93 HOH HOH . E 4 HOH X 93 923 94 HOH HOH . E 4 HOH X 94 924 95 HOH HOH . E 4 HOH X 95 925 96 HOH HOH . E 4 HOH X 96 926 97 HOH HOH . E 4 HOH X 97 927 98 HOH HOH . E 4 HOH X 98 928 99 HOH HOH . E 4 HOH X 99 929 100 HOH HOH . E 4 HOH X 100 930 101 HOH HOH . E 4 HOH X 101 931 102 HOH HOH . E 4 HOH X 102 932 103 HOH HOH . E 4 HOH X 103 933 104 HOH HOH . E 4 HOH X 104 934 105 HOH HOH . E 4 HOH X 105 935 106 HOH HOH . E 4 HOH X 106 936 107 HOH HOH . E 4 HOH X 107 937 108 HOH HOH . E 4 HOH X 108 938 109 HOH HOH . E 4 HOH X 109 939 110 HOH HOH . E 4 HOH X 110 940 111 HOH HOH . E 4 HOH X 111 941 112 HOH HOH . E 4 HOH X 112 942 113 HOH HOH . E 4 HOH X 113 943 114 HOH HOH . E 4 HOH X 114 944 115 HOH HOH . E 4 HOH X 115 945 116 HOH HOH . E 4 HOH X 116 946 117 HOH HOH . E 4 HOH X 117 947 118 HOH HOH . E 4 HOH X 118 948 119 HOH HOH . E 4 HOH X 119 949 120 HOH HOH . E 4 HOH X 120 950 121 HOH HOH . E 4 HOH X 121 951 122 HOH HOH . E 4 HOH X 122 952 123 HOH HOH . E 4 HOH X 123 953 124 HOH HOH . E 4 HOH X 124 954 125 HOH HOH . E 4 HOH X 125 955 126 HOH HOH . E 4 HOH X 126 956 127 HOH HOH . E 4 HOH X 127 957 128 HOH HOH . E 4 HOH X 128 958 129 HOH HOH . E 4 HOH X 129 959 130 HOH HOH . E 4 HOH X 130 960 132 HOH HOH . E 4 HOH X 131 961 133 HOH HOH . E 4 HOH X 132 962 134 HOH HOH . E 4 HOH X 133 963 135 HOH HOH . E 4 HOH X 134 964 136 HOH HOH . E 4 HOH X 135 965 137 HOH HOH . E 4 HOH X 136 966 138 HOH HOH . E 4 HOH X 137 967 139 HOH HOH . E 4 HOH X 138 968 140 HOH HOH . E 4 HOH X 139 969 141 HOH HOH . E 4 HOH X 140 970 142 HOH HOH . E 4 HOH X 141 971 143 HOH HOH . E 4 HOH X 142 972 144 HOH HOH . E 4 HOH X 143 973 145 HOH HOH . E 4 HOH X 144 974 146 HOH HOH . E 4 HOH X 145 975 147 HOH HOH . E 4 HOH X 146 976 148 HOH HOH . E 4 HOH X 147 977 149 HOH HOH . E 4 HOH X 148 978 150 HOH HOH . E 4 HOH X 149 979 151 HOH HOH . E 4 HOH X 150 980 152 HOH HOH . E 4 HOH X 151 981 153 HOH HOH . E 4 HOH X 152 982 154 HOH HOH . E 4 HOH X 153 983 155 HOH HOH . E 4 HOH X 154 984 156 HOH HOH . E 4 HOH X 155 985 157 HOH HOH . E 4 HOH X 156 986 158 HOH HOH . E 4 HOH X 157 987 159 HOH HOH . E 4 HOH X 158 988 160 HOH HOH . E 4 HOH X 159 989 161 HOH HOH . E 4 HOH X 160 990 162 HOH HOH . E 4 HOH X 161 991 163 HOH HOH . E 4 HOH X 162 992 164 HOH HOH . E 4 HOH X 163 993 165 HOH HOH . E 4 HOH X 164 994 166 HOH HOH . E 4 HOH X 165 995 167 HOH HOH . E 4 HOH X 166 996 168 HOH HOH . E 4 HOH X 167 997 169 HOH HOH . E 4 HOH X 168 998 170 HOH HOH . E 4 HOH X 169 999 171 HOH HOH . E 4 HOH X 170 1000 172 HOH HOH . E 4 HOH X 171 1001 173 HOH HOH . E 4 HOH X 172 1002 174 HOH HOH . E 4 HOH X 173 1003 175 HOH HOH . E 4 HOH X 174 1004 176 HOH HOH . E 4 HOH X 175 1005 177 HOH HOH . E 4 HOH X 176 1006 178 HOH HOH . E 4 HOH X 177 1007 179 HOH HOH . E 4 HOH X 178 1008 180 HOH HOH . E 4 HOH X 179 1009 181 HOH HOH . E 4 HOH X 180 1010 182 HOH HOH . E 4 HOH X 181 1011 183 HOH HOH . E 4 HOH X 182 1012 184 HOH HOH . E 4 HOH X 183 1013 185 HOH HOH . E 4 HOH X 184 1014 186 HOH HOH . E 4 HOH X 185 1015 187 HOH HOH . E 4 HOH X 186 1016 188 HOH HOH . E 4 HOH X 187 1017 189 HOH HOH . E 4 HOH X 188 1018 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 2HP . . . C 3 28.783 2.036 8.488 1 41.98 ? P 2HP 829 X 1 HETATM 2 O O1 2HP . . . C 3 28.337 3.169 9.43 1 46.09 ? O1 2HP 829 X 1 HETATM 3 O O2 2HP . . . C 3 29.414 0.857 9.15 1 35.92 ? O2 2HP 829 X 1 HETATM 4 O O3 2HP . . . C 3 27.323 1.638 7.587 1 41.39 ? O3 2HP 829 X 1 HETATM 5 O O4 2HP . . . C 3 30.05 2.72 7.434 1 43.46 ? O4 2HP 829 X 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #