data_3CH6 # _model_server_result.job_id IjjnRZSgD0y4ZsIQLrUK4g _model_server_result.datetime_utc '2024-12-21 18:59:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ch6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":603}' # _entry.id 3CH6 # _exptl.entry_id 3CH6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 326.408 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3,3-dimethylpiperidin-1-yl)(6-(3-fluoro-4-methylphenyl)pyridin-2-yl)methanone _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CH6 _cell.length_a 74.5 _cell.length_b 94.3 _cell.length_c 167 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CH6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C20 H23 F N2 O' _chem_comp.formula_weight 326.408 _chem_comp.id 311 _chem_comp.mon_nstd_flag . _chem_comp.name (3,3-dimethylpiperidin-1-yl)(6-(3-fluoro-4-methylphenyl)pyridin-2-yl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C20 311 sing 1 n n C13 N22 311 sing 2 n n C18 C9 311 doub 3 n y C18 C14 311 sing 4 n y C18 F24 311 sing 5 n n C17 C19 311 sing 6 n n C17 C6 311 doub 7 n y C17 N21 311 sing 8 n y C16 C15 311 sing 9 n y C16 C5 311 sing 10 n y C16 N21 311 doub 11 n y C15 C8 311 doub 12 n y C15 C9 311 sing 13 n y C19 N22 311 sing 14 n n C19 O23 311 doub 15 n n C20 C11 311 sing 16 n n C20 C2 311 sing 17 n n C20 C3 311 sing 18 n n C11 C10 311 sing 19 n n C12 C10 311 sing 20 n n C12 N22 311 sing 21 n n C1 C14 311 sing 22 n n C4 C5 311 doub 23 n y C4 C6 311 sing 24 n y C7 C8 311 sing 25 n y C7 C14 311 doub 26 n y C13 H13 311 sing 27 n n C13 H13A 311 sing 28 n n C11 H11 311 sing 29 n n C11 H11A 311 sing 30 n n C12 H12 311 sing 31 n n C12 H12A 311 sing 32 n n C1 H1 311 sing 33 n n C1 H1A 311 sing 34 n n C1 H1B 311 sing 35 n n C2 H2 311 sing 36 n n C2 H2A 311 sing 37 n n C2 H2B 311 sing 38 n n C3 H3 311 sing 39 n n C3 H3A 311 sing 40 n n C3 H3B 311 sing 41 n n C4 H4 311 sing 42 n n C5 H5 311 sing 43 n n C6 H6 311 sing 44 n n C7 H7 311 sing 45 n n C8 H8 311 sing 46 n n C9 H9 311 sing 47 n n C10 H10 311 sing 48 n n C10 H10A 311 sing 49 n n # _atom_sites.entry_id 3CH6 _atom_sites.fract_transf_matrix[1][1] 0.013423 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005988 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAP A 1 501 501 NAP NAP . F 3 311 A 1 601 601 311 311 . G 2 NAP B 1 502 502 NAP NAP . H 3 311 B 1 602 602 311 311 . I 2 NAP D 1 503 503 NAP NAP . J 3 311 D 1 603 603 311 311 . K 2 NAP E 1 504 504 NAP NAP . L 3 311 E 1 604 604 311 311 . M 4 HOH A 1 804 804 HOH HOH . M 4 HOH A 2 805 805 HOH HOH . M 4 HOH A 3 806 806 HOH HOH . M 4 HOH A 4 813 813 HOH HOH . M 4 HOH A 5 817 817 HOH HOH . M 4 HOH A 6 818 818 HOH HOH . M 4 HOH A 7 839 839 HOH HOH . M 4 HOH A 8 841 841 HOH HOH . M 4 HOH A 9 843 843 HOH HOH . M 4 HOH A 10 848 848 HOH HOH . M 4 HOH A 11 857 857 HOH HOH . M 4 HOH A 12 861 861 HOH HOH . M 4 HOH A 13 868 868 HOH HOH . M 4 HOH A 14 871 871 HOH HOH . M 4 HOH A 15 875 875 HOH HOH . M 4 HOH A 16 876 876 HOH HOH . M 4 HOH A 17 883 883 HOH HOH . M 4 HOH A 18 886 886 HOH HOH . M 4 HOH A 19 889 889 HOH HOH . M 4 HOH A 20 893 893 HOH HOH . M 4 HOH A 21 894 894 HOH HOH . M 4 HOH A 22 895 895 HOH HOH . M 4 HOH A 23 904 904 HOH HOH . M 4 HOH A 24 905 905 HOH HOH . M 4 HOH A 25 906 906 HOH HOH . M 4 HOH A 26 913 913 HOH HOH . M 4 HOH A 27 914 914 HOH HOH . M 4 HOH A 28 917 917 HOH HOH . M 4 HOH A 29 930 930 HOH HOH . M 4 HOH A 30 931 931 HOH HOH . M 4 HOH A 31 932 932 HOH HOH . M 4 HOH A 32 934 934 HOH HOH . M 4 HOH A 33 940 940 HOH HOH . M 4 HOH A 34 942 942 HOH HOH . M 4 HOH A 35 943 943 HOH HOH . M 4 HOH A 36 949 949 HOH HOH . M 4 HOH A 37 952 952 HOH HOH . M 4 HOH A 38 956 956 HOH HOH . M 4 HOH A 39 959 959 HOH HOH . M 4 HOH A 40 964 964 HOH HOH . M 4 HOH A 41 965 965 HOH HOH . M 4 HOH A 42 967 967 HOH HOH . M 4 HOH A 43 975 975 HOH HOH . M 4 HOH A 44 979 979 HOH HOH . M 4 HOH A 45 988 988 HOH HOH . M 4 HOH A 46 994 994 HOH HOH . M 4 HOH A 47 996 996 HOH HOH . M 4 HOH A 48 1000 1000 HOH HOH . M 4 HOH A 49 1011 1011 HOH HOH . M 4 HOH A 50 1017 1017 HOH HOH . M 4 HOH A 51 1023 1023 HOH HOH . M 4 HOH A 52 1025 1025 HOH HOH . M 4 HOH A 53 1031 1031 HOH HOH . M 4 HOH A 54 1032 1032 HOH HOH . M 4 HOH A 55 1045 1045 HOH HOH . N 4 HOH B 1 802 802 HOH HOH . N 4 HOH B 2 807 807 HOH HOH . N 4 HOH B 3 821 821 HOH HOH . N 4 HOH B 4 823 823 HOH HOH . N 4 HOH B 5 827 827 HOH HOH . N 4 HOH B 6 829 829 HOH HOH . N 4 HOH B 7 832 832 HOH HOH . N 4 HOH B 8 847 847 HOH HOH . N 4 HOH B 9 849 849 HOH HOH . N 4 HOH B 10 852 852 HOH HOH . N 4 HOH B 11 856 856 HOH HOH . N 4 HOH B 12 858 858 HOH HOH . N 4 HOH B 13 862 862 HOH HOH . N 4 HOH B 14 864 864 HOH HOH . N 4 HOH B 15 870 870 HOH HOH . N 4 HOH B 16 873 873 HOH HOH . N 4 HOH B 17 878 878 HOH HOH . N 4 HOH B 18 880 880 HOH HOH . N 4 HOH B 19 898 898 HOH HOH . N 4 HOH B 20 900 900 HOH HOH . N 4 HOH B 21 901 901 HOH HOH . N 4 HOH B 22 903 903 HOH HOH . N 4 HOH B 23 907 907 HOH HOH . N 4 HOH B 24 908 908 HOH HOH . N 4 HOH B 25 910 910 HOH HOH . N 4 HOH B 26 911 911 HOH HOH . N 4 HOH B 27 918 918 HOH HOH . N 4 HOH B 28 920 920 HOH HOH . N 4 HOH B 29 921 921 HOH HOH . N 4 HOH B 30 925 925 HOH HOH . N 4 HOH B 31 926 926 HOH HOH . N 4 HOH B 32 927 927 HOH HOH . N 4 HOH B 33 928 928 HOH HOH . N 4 HOH B 34 933 933 HOH HOH . N 4 HOH B 35 936 936 HOH HOH . N 4 HOH B 36 937 937 HOH HOH . N 4 HOH B 37 938 938 HOH HOH . N 4 HOH B 38 951 951 HOH HOH . N 4 HOH B 39 953 953 HOH HOH . N 4 HOH B 40 955 955 HOH HOH . N 4 HOH B 41 960 960 HOH HOH . N 4 HOH B 42 961 961 HOH HOH . N 4 HOH B 43 962 962 HOH HOH . N 4 HOH B 44 963 963 HOH HOH . N 4 HOH B 45 969 969 HOH HOH . N 4 HOH B 46 970 970 HOH HOH . N 4 HOH B 47 973 973 HOH HOH . N 4 HOH B 48 974 974 HOH HOH . N 4 HOH B 49 976 976 HOH HOH . N 4 HOH B 50 980 980 HOH HOH . N 4 HOH B 51 982 982 HOH HOH . N 4 HOH B 52 992 992 HOH HOH . N 4 HOH B 53 997 997 HOH HOH . N 4 HOH B 54 998 998 HOH HOH . N 4 HOH B 55 1004 1004 HOH HOH . N 4 HOH B 56 1010 1010 HOH HOH . N 4 HOH B 57 1012 1012 HOH HOH . N 4 HOH B 58 1014 1014 HOH HOH . N 4 HOH B 59 1019 1019 HOH HOH . N 4 HOH B 60 1021 1021 HOH HOH . N 4 HOH B 61 1034 1034 HOH HOH . N 4 HOH B 62 1038 1038 HOH HOH . N 4 HOH B 63 1044 1044 HOH HOH . N 4 HOH B 64 1046 1046 HOH HOH . N 4 HOH B 65 1049 1049 HOH HOH . O 4 HOH D 1 808 808 HOH HOH . O 4 HOH D 2 811 811 HOH HOH . O 4 HOH D 3 814 814 HOH HOH . O 4 HOH D 4 815 815 HOH HOH . O 4 HOH D 5 816 816 HOH HOH . O 4 HOH D 6 820 820 HOH HOH . O 4 HOH D 7 822 822 HOH HOH . O 4 HOH D 8 824 824 HOH HOH . O 4 HOH D 9 825 825 HOH HOH . O 4 HOH D 10 826 826 HOH HOH . O 4 HOH D 11 833 833 HOH HOH . O 4 HOH D 12 834 834 HOH HOH . O 4 HOH D 13 835 835 HOH HOH . O 4 HOH D 14 836 836 HOH HOH . O 4 HOH D 15 837 837 HOH HOH . O 4 HOH D 16 838 838 HOH HOH . O 4 HOH D 17 846 846 HOH HOH . O 4 HOH D 18 850 850 HOH HOH . O 4 HOH D 19 851 851 HOH HOH . O 4 HOH D 20 853 853 HOH HOH . O 4 HOH D 21 855 855 HOH HOH . O 4 HOH D 22 860 860 HOH HOH . O 4 HOH D 23 867 867 HOH HOH . O 4 HOH D 24 869 869 HOH HOH . O 4 HOH D 25 872 872 HOH HOH . O 4 HOH D 26 877 877 HOH HOH . O 4 HOH D 27 881 881 HOH HOH . O 4 HOH D 28 882 882 HOH HOH . O 4 HOH D 29 887 887 HOH HOH . O 4 HOH D 30 888 888 HOH HOH . O 4 HOH D 31 890 890 HOH HOH . O 4 HOH D 32 896 896 HOH HOH . O 4 HOH D 33 897 897 HOH HOH . O 4 HOH D 34 899 899 HOH HOH . O 4 HOH D 35 902 902 HOH HOH . O 4 HOH D 36 912 912 HOH HOH . O 4 HOH D 37 916 916 HOH HOH . O 4 HOH D 38 922 922 HOH HOH . O 4 HOH D 39 923 923 HOH HOH . O 4 HOH D 40 924 924 HOH HOH . O 4 HOH D 41 935 935 HOH HOH . O 4 HOH D 42 941 941 HOH HOH . O 4 HOH D 43 945 945 HOH HOH . O 4 HOH D 44 947 947 HOH HOH . O 4 HOH D 45 948 948 HOH HOH . O 4 HOH D 46 957 957 HOH HOH . O 4 HOH D 47 972 972 HOH HOH . O 4 HOH D 48 981 981 HOH HOH . O 4 HOH D 49 986 986 HOH HOH . O 4 HOH D 50 989 989 HOH HOH . O 4 HOH D 51 993 993 HOH HOH . O 4 HOH D 52 995 995 HOH HOH . O 4 HOH D 53 1002 1002 HOH HOH . O 4 HOH D 54 1005 1005 HOH HOH . O 4 HOH D 55 1009 1009 HOH HOH . O 4 HOH D 56 1027 1027 HOH HOH . O 4 HOH D 57 1040 1040 HOH HOH . O 4 HOH D 58 1041 1041 HOH HOH . O 4 HOH D 59 1042 1042 HOH HOH . O 4 HOH D 60 1043 1043 HOH HOH . P 4 HOH E 1 809 809 HOH HOH . P 4 HOH E 2 810 810 HOH HOH . P 4 HOH E 3 812 812 HOH HOH . P 4 HOH E 4 828 828 HOH HOH . P 4 HOH E 5 830 830 HOH HOH . P 4 HOH E 6 831 831 HOH HOH . P 4 HOH E 7 840 840 HOH HOH . P 4 HOH E 8 842 842 HOH HOH . P 4 HOH E 9 845 845 HOH HOH . P 4 HOH E 10 863 863 HOH HOH . P 4 HOH E 11 865 865 HOH HOH . P 4 HOH E 12 866 866 HOH HOH . P 4 HOH E 13 874 874 HOH HOH . P 4 HOH E 14 884 884 HOH HOH . P 4 HOH E 15 885 885 HOH HOH . P 4 HOH E 16 891 891 HOH HOH . P 4 HOH E 17 892 892 HOH HOH . P 4 HOH E 18 909 909 HOH HOH . P 4 HOH E 19 915 915 HOH HOH . P 4 HOH E 20 919 919 HOH HOH . P 4 HOH E 21 939 939 HOH HOH . P 4 HOH E 22 944 944 HOH HOH . P 4 HOH E 23 946 946 HOH HOH . P 4 HOH E 24 950 950 HOH HOH . P 4 HOH E 25 954 954 HOH HOH . P 4 HOH E 26 958 958 HOH HOH . P 4 HOH E 27 966 966 HOH HOH . P 4 HOH E 28 971 971 HOH HOH . P 4 HOH E 29 977 977 HOH HOH . P 4 HOH E 30 978 978 HOH HOH . P 4 HOH E 31 984 984 HOH HOH . P 4 HOH E 32 985 985 HOH HOH . P 4 HOH E 33 987 987 HOH HOH . P 4 HOH E 34 990 990 HOH HOH . P 4 HOH E 35 991 991 HOH HOH . P 4 HOH E 36 999 999 HOH HOH . P 4 HOH E 37 1001 1001 HOH HOH . P 4 HOH E 38 1003 1003 HOH HOH . P 4 HOH E 39 1006 1006 HOH HOH . P 4 HOH E 40 1007 1007 HOH HOH . P 4 HOH E 41 1008 1008 HOH HOH . P 4 HOH E 42 1013 1013 HOH HOH . P 4 HOH E 43 1016 1016 HOH HOH . P 4 HOH E 44 1020 1020 HOH HOH . P 4 HOH E 45 1024 1024 HOH HOH . P 4 HOH E 46 1026 1026 HOH HOH . P 4 HOH E 47 1028 1028 HOH HOH . P 4 HOH E 48 1029 1029 HOH HOH . P 4 HOH E 49 1030 1030 HOH HOH . P 4 HOH E 50 1033 1033 HOH HOH . P 4 HOH E 51 1036 1036 HOH HOH . P 4 HOH E 52 1037 1037 HOH HOH . P 4 HOH E 53 1039 1039 HOH HOH . P 4 HOH E 54 1047 1047 HOH HOH . P 4 HOH E 55 1048 1048 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 311 . . . J 3 34.4 51.906 131.578 1 17.11 ? C13 311 603 D 1 HETATM 2 C C18 311 . . . J 3 30.131 45.986 127.192 1 27.46 ? C18 311 603 D 1 HETATM 3 C C17 311 . . . J 3 34.203 50.254 128.107 1 13.29 ? C17 311 603 D 1 HETATM 4 C C16 311 . . . J 3 32.786 48.575 127.342 1 18.89 ? C16 311 603 D 1 HETATM 5 C C15 311 . . . J 3 31.539 47.909 127.613 1 23.1 ? C15 311 603 D 1 HETATM 6 C C19 311 . . . J 3 34.301 51.245 129.19 1 15.49 ? C19 311 603 D 1 HETATM 7 C C20 311 . . . J 3 33.228 51.55 132.495 1 20.63 ? C20 311 603 D 1 HETATM 8 C C11 311 . . . J 3 33.373 50.061 133.103 1 17.42 ? C11 311 603 D 1 HETATM 9 C C12 311 . . . J 3 34.518 49.4 130.937 1 20.36 ? C12 311 603 D 1 HETATM 10 C C1 311 . . . J 3 27.798 45.585 127.941 1 18.63 ? C1 311 603 D 1 HETATM 11 C C2 311 . . . J 3 31.9 51.78 131.679 1 16.96 ? C2 311 603 D 1 HETATM 12 C C3 311 . . . J 3 33.155 52.535 133.746 1 17.6 ? C3 311 603 D 1 HETATM 13 C C4 311 . . . J 3 34.726 49.165 125.972 1 11.82 ? C4 311 603 D 1 HETATM 14 C C5 311 . . . J 3 33.584 48.386 126.205 1 14.81 ? C5 311 603 D 1 HETATM 15 C C6 311 . . . J 3 35.054 50.136 126.93 1 11.67 ? C6 311 603 D 1 HETATM 16 C C7 311 . . . J 3 29.196 47.777 128.454 1 20.85 ? C7 311 603 D 1 HETATM 17 C C8 311 . . . J 3 30.43 48.478 128.294 1 21.91 ? C8 311 603 D 1 HETATM 18 C C9 311 . . . J 3 31.357 46.666 127.015 1 27.78 ? C9 311 603 D 1 HETATM 19 C C10 311 . . . J 3 33.46 49.047 131.931 1 14.73 ? C10 311 603 D 1 HETATM 20 C C14 311 . . . J 3 29.055 46.477 127.865 1 23.12 ? C14 311 603 D 1 HETATM 21 N N21 311 . . . J 3 33.062 49.527 128.256 1 18.24 ? N21 311 603 D 1 HETATM 22 N N22 311 . . . J 3 34.384 50.866 130.5 1 21.81 ? N22 311 603 D 1 HETATM 23 O O23 311 . . . J 3 34.399 52.402 128.808 1 17.9 ? O23 311 603 D 1 HETATM 24 F F24 311 . . . J 3 30.057 44.778 126.705 1 28.51 ? F24 311 603 D 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #