data_3CHU # _model_server_result.job_id iQN86gZLy560o7UlN3VRrw _model_server_result.datetime_utc '2024-10-27 00:32:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3chu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 3CHU # _exptl.entry_id 3CHU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 127.689 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description MU-OXO-DIIRON _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CHU _cell.length_a 57.979 _cell.length_b 72.534 _cell.length_c 138.792 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CHU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 101 A GLU 101 1_555 C FE1 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc2 A OE1 GLU 136 A GLU 136 1_555 C FE1 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc3 A OE2 GLU 136 A GLU 136 1_555 C FE2 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc4 A ND1 HIS 139 A HIS 139 1_555 C FE1 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc5 A OE1 GLU 196 A GLU 196 1_555 C FE2 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc6 A NE2 HIS 223 A HIS 223 1_555 C FE1 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc7 A OE2 GLU 227 A GLU 227 1_555 C FE2 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc8 A ND1 HIS 230 A HIS 230 1_555 C FE2 FEO . A FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc9 B OE1 GLU 101 B GLU 101 1_555 D FE2 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc10 B OE1 GLU 136 B GLU 136 1_555 D FE2 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc11 B OE2 GLU 136 B GLU 136 1_555 D FE1 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc12 B ND1 HIS 139 B HIS 139 1_555 D FE2 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc13 B OE1 GLU 196 B GLU 196 1_555 D FE1 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc14 B NE2 HIS 223 B HIS 223 1_555 D FE2 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc15 B OE2 GLU 227 B GLU 227 1_555 D FE1 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc16 B ND1 HIS 230 B HIS 230 1_555 D FE1 FEO . B FEO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? # _chem_comp.formula 'Fe2 O' _chem_comp.formula_weight 127.689 _chem_comp.id FEO _chem_comp.mon_nstd_flag . _chem_comp.name MU-OXO-DIIRON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 O FEO sing 83 n n FE2 O FEO sing 84 n n # _atom_sites.entry_id 3CHU _atom_sites.fract_transf_matrix[1][1] 0.017248 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013787 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007205 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FEO A 1 501 501 FEO FEO . D 2 FEO B 1 501 501 FEO FEO . E 3 HOH A 1 502 3 HOH HOH . E 3 HOH A 2 503 7 HOH HOH . E 3 HOH A 3 504 16 HOH HOH . E 3 HOH A 4 505 17 HOH HOH . E 3 HOH A 5 506 18 HOH HOH . E 3 HOH A 6 507 19 HOH HOH . E 3 HOH A 7 508 29 HOH HOH . E 3 HOH A 8 509 31 HOH HOH . E 3 HOH A 9 510 35 HOH HOH . E 3 HOH A 10 511 37 HOH HOH . E 3 HOH A 11 512 44 HOH HOH . E 3 HOH A 12 513 50 HOH HOH . E 3 HOH A 13 514 53 HOH HOH . E 3 HOH A 14 515 56 HOH HOH . E 3 HOH A 15 516 57 HOH HOH . E 3 HOH A 16 517 61 HOH HOH . E 3 HOH A 17 518 63 HOH HOH . E 3 HOH A 18 519 64 HOH HOH . E 3 HOH A 19 520 70 HOH HOH . E 3 HOH A 20 521 73 HOH HOH . E 3 HOH A 21 522 76 HOH HOH . E 3 HOH A 22 523 81 HOH HOH . E 3 HOH A 23 524 83 HOH HOH . E 3 HOH A 24 525 85 HOH HOH . E 3 HOH A 25 526 89 HOH HOH . E 3 HOH A 26 527 97 HOH HOH . E 3 HOH A 27 528 98 HOH HOH . E 3 HOH A 28 529 99 HOH HOH . E 3 HOH A 29 530 100 HOH HOH . E 3 HOH A 30 531 106 HOH HOH . E 3 HOH A 31 532 107 HOH HOH . E 3 HOH A 32 533 110 HOH HOH . E 3 HOH A 33 534 115 HOH HOH . E 3 HOH A 34 535 119 HOH HOH . E 3 HOH A 35 536 120 HOH HOH . E 3 HOH A 36 537 125 HOH HOH . E 3 HOH A 37 538 129 HOH HOH . E 3 HOH A 38 539 130 HOH HOH . E 3 HOH A 39 540 131 HOH HOH . E 3 HOH A 40 541 134 HOH HOH . E 3 HOH A 41 542 137 HOH HOH . E 3 HOH A 42 543 138 HOH HOH . E 3 HOH A 43 544 139 HOH HOH . E 3 HOH A 44 545 141 HOH HOH . E 3 HOH A 45 546 146 HOH HOH . E 3 HOH A 46 547 152 HOH HOH . E 3 HOH A 47 548 153 HOH HOH . E 3 HOH A 48 549 161 HOH HOH . E 3 HOH A 49 550 165 HOH HOH . E 3 HOH A 50 551 174 HOH HOH . E 3 HOH A 51 552 176 HOH HOH . E 3 HOH A 52 553 178 HOH HOH . E 3 HOH A 53 554 180 HOH HOH . E 3 HOH A 54 555 189 HOH HOH . E 3 HOH A 55 556 193 HOH HOH . E 3 HOH A 56 557 194 HOH HOH . E 3 HOH A 57 558 198 HOH HOH . E 3 HOH A 58 559 200 HOH HOH . E 3 HOH A 59 560 202 HOH HOH . E 3 HOH A 60 561 204 HOH HOH . E 3 HOH A 61 562 213 HOH HOH . E 3 HOH A 62 563 214 HOH HOH . E 3 HOH A 63 564 216 HOH HOH . E 3 HOH A 64 565 219 HOH HOH . E 3 HOH A 65 566 221 HOH HOH . E 3 HOH A 66 567 222 HOH HOH . E 3 HOH A 67 568 228 HOH HOH . E 3 HOH A 68 569 229 HOH HOH . E 3 HOH A 69 570 232 HOH HOH . E 3 HOH A 70 581 143 HOH HOH . F 3 HOH B 1 502 1 HOH HOH . F 3 HOH B 2 503 2 HOH HOH . F 3 HOH B 3 504 4 HOH HOH . F 3 HOH B 4 505 5 HOH HOH . F 3 HOH B 5 506 8 HOH HOH . F 3 HOH B 6 507 9 HOH HOH . F 3 HOH B 7 508 10 HOH HOH . F 3 HOH B 8 509 11 HOH HOH . F 3 HOH B 9 510 13 HOH HOH . F 3 HOH B 10 511 14 HOH HOH . F 3 HOH B 11 512 15 HOH HOH . F 3 HOH B 12 513 20 HOH HOH . F 3 HOH B 13 514 22 HOH HOH . F 3 HOH B 14 515 23 HOH HOH . F 3 HOH B 15 516 24 HOH HOH . F 3 HOH B 16 517 26 HOH HOH . F 3 HOH B 17 518 27 HOH HOH . F 3 HOH B 18 519 30 HOH HOH . F 3 HOH B 19 520 33 HOH HOH . F 3 HOH B 20 521 34 HOH HOH . F 3 HOH B 21 522 36 HOH HOH . F 3 HOH B 22 523 38 HOH HOH . F 3 HOH B 23 524 39 HOH HOH . F 3 HOH B 24 525 40 HOH HOH . F 3 HOH B 25 526 41 HOH HOH . F 3 HOH B 26 527 42 HOH HOH . F 3 HOH B 27 528 43 HOH HOH . F 3 HOH B 28 529 45 HOH HOH . F 3 HOH B 29 530 46 HOH HOH . F 3 HOH B 30 531 48 HOH HOH . F 3 HOH B 31 532 49 HOH HOH . F 3 HOH B 32 533 51 HOH HOH . F 3 HOH B 33 534 52 HOH HOH . F 3 HOH B 34 535 54 HOH HOH . F 3 HOH B 35 536 58 HOH HOH . F 3 HOH B 36 537 59 HOH HOH . F 3 HOH B 37 538 60 HOH HOH . F 3 HOH B 38 539 62 HOH HOH . F 3 HOH B 39 540 65 HOH HOH . F 3 HOH B 40 541 66 HOH HOH . F 3 HOH B 41 542 67 HOH HOH . F 3 HOH B 42 543 68 HOH HOH . F 3 HOH B 43 544 69 HOH HOH . F 3 HOH B 44 545 71 HOH HOH . F 3 HOH B 45 546 72 HOH HOH . F 3 HOH B 46 547 74 HOH HOH . F 3 HOH B 47 548 75 HOH HOH . F 3 HOH B 48 549 77 HOH HOH . F 3 HOH B 49 550 78 HOH HOH . F 3 HOH B 50 551 82 HOH HOH . F 3 HOH B 51 552 84 HOH HOH . F 3 HOH B 52 553 86 HOH HOH . F 3 HOH B 53 554 88 HOH HOH . F 3 HOH B 54 555 92 HOH HOH . F 3 HOH B 55 556 93 HOH HOH . F 3 HOH B 56 557 95 HOH HOH . F 3 HOH B 57 558 96 HOH HOH . F 3 HOH B 58 559 101 HOH HOH . F 3 HOH B 59 560 102 HOH HOH . F 3 HOH B 60 561 104 HOH HOH . F 3 HOH B 61 562 105 HOH HOH . F 3 HOH B 62 563 108 HOH HOH . F 3 HOH B 63 564 111 HOH HOH . F 3 HOH B 64 565 112 HOH HOH . F 3 HOH B 65 566 113 HOH HOH . F 3 HOH B 66 567 114 HOH HOH . F 3 HOH B 67 568 116 HOH HOH . F 3 HOH B 68 569 117 HOH HOH . F 3 HOH B 69 570 118 HOH HOH . F 3 HOH B 70 571 121 HOH HOH . F 3 HOH B 71 572 123 HOH HOH . F 3 HOH B 72 573 127 HOH HOH . F 3 HOH B 73 574 128 HOH HOH . F 3 HOH B 74 575 132 HOH HOH . F 3 HOH B 75 576 133 HOH HOH . F 3 HOH B 76 577 135 HOH HOH . F 3 HOH B 77 578 136 HOH HOH . F 3 HOH B 78 579 140 HOH HOH . F 3 HOH B 79 580 142 HOH HOH . F 3 HOH B 80 582 144 HOH HOH . F 3 HOH B 81 583 145 HOH HOH . F 3 HOH B 82 584 147 HOH HOH . F 3 HOH B 83 585 151 HOH HOH . F 3 HOH B 84 586 154 HOH HOH . F 3 HOH B 85 587 156 HOH HOH . F 3 HOH B 86 588 158 HOH HOH . F 3 HOH B 87 589 160 HOH HOH . F 3 HOH B 88 590 164 HOH HOH . F 3 HOH B 89 591 166 HOH HOH . F 3 HOH B 90 592 167 HOH HOH . F 3 HOH B 91 593 169 HOH HOH . F 3 HOH B 92 594 170 HOH HOH . F 3 HOH B 93 595 171 HOH HOH . F 3 HOH B 94 596 175 HOH HOH . F 3 HOH B 95 597 179 HOH HOH . F 3 HOH B 96 598 181 HOH HOH . F 3 HOH B 97 599 182 HOH HOH . F 3 HOH B 98 600 184 HOH HOH . F 3 HOH B 99 601 187 HOH HOH . F 3 HOH B 100 602 188 HOH HOH . F 3 HOH B 101 603 190 HOH HOH . F 3 HOH B 102 604 191 HOH HOH . F 3 HOH B 103 605 192 HOH HOH . F 3 HOH B 104 606 197 HOH HOH . F 3 HOH B 105 607 199 HOH HOH . F 3 HOH B 106 608 201 HOH HOH . F 3 HOH B 107 609 205 HOH HOH . F 3 HOH B 108 610 206 HOH HOH . F 3 HOH B 109 611 209 HOH HOH . F 3 HOH B 110 612 210 HOH HOH . F 3 HOH B 111 613 215 HOH HOH . F 3 HOH B 112 614 217 HOH HOH . F 3 HOH B 113 615 224 HOH HOH . F 3 HOH B 114 616 226 HOH HOH . F 3 HOH B 115 617 230 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FEO . . . D 2 12.394 3.271 6.483 1 20.01 ? FE1 FEO 501 B 1 HETATM 2 FE FE2 FEO . . . D 2 9.213 4.206 7.613 1 19.64 ? FE2 FEO 501 B 1 HETATM 3 O O FEO . . . D 2 10.75 4.389 6.443 1 14.84 ? O FEO 501 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #