data_3CJQ # _model_server_result.job_id 4kZmzktGnYyDlz1q96Wy9g _model_server_result.datetime_utc '2025-03-05 02:33:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cjq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1}' # _entry.id 3CJQ # _exptl.entry_id 3CJQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 177.264 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N,N-dimethyl-L-methionine _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CJQ _cell.length_a 51.526 _cell.length_b 164.976 _cell.length_c 180.341 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CJQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,O,P 1 1 C,D,J,K,Q,R 2 1 E,F,L,M,N,S,T 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 K N N ? 5 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 I C 2MM . B 2MM 1 1_555 B N LYS 1 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? covale ? covale2 K C 2MM . E 2MM 1 1_555 D N LYS 1 E LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? covale ? covale3 N C 2MM . H 2MM 1 1_555 F N LYS 1 H LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? # _chem_comp.formula 'C7 H15 N O2 S' _chem_comp.formula_weight 177.264 _chem_comp.id 2MM _chem_comp.mon_nstd_flag . _chem_comp.name N,N-dimethyl-L-methionine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag SD CE 2MM sing 1 n n CE HE 2MM sing 2 n n CE HEA 2MM sing 3 n n CE HEB 2MM sing 4 n n CG SD 2MM sing 5 n n CB CG 2MM sing 6 n n CG HG 2MM sing 7 n n CG HGA 2MM sing 8 n n CA CB 2MM sing 9 n n CB HB 2MM sing 10 n n CB HBA 2MM sing 11 n n C CA 2MM sing 12 n n N CA 2MM sing 13 n n CA HA 2MM sing 14 n n O C 2MM doub 15 n n C OXT 2MM sing 16 n n CN2 N 2MM sing 17 n n CN1 N 2MM sing 18 n n CN2 HN2 2MM sing 19 n n CN2 HN2A 2MM sing 20 n n CN2 HN2B 2MM sing 21 n n CN1 HN1 2MM sing 22 n n CN1 HN1A 2MM sing 23 n n CN1 HN1B 2MM sing 24 n n OXT HOXT 2MM sing 25 n n # _atom_sites.entry_id 3CJQ _atom_sites.fract_transf_matrix[1][1] 0.019408 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006061 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005545 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 SAH A 1 303 303 SAH SAH . H 4 IOD B 1 148 148 IOD IOD . I 5 2MM B 1 1 1 2MM 2MM . J 3 SAH D 1 303 303 SAH SAH . K 5 2MM E 1 1 1 2MM 2MM . L 3 SAH G 1 303 303 SAH SAH . M 4 IOD H 1 148 148 IOD IOD . N 5 2MM H 1 1 1 2MM 2MM . O 6 HOH A 1 304 304 HOH HOH . O 6 HOH A 2 305 305 HOH HOH . O 6 HOH A 3 306 306 HOH HOH . O 6 HOH A 4 307 307 HOH HOH . O 6 HOH A 5 308 308 HOH HOH . O 6 HOH A 6 309 309 HOH HOH . O 6 HOH A 7 310 310 HOH HOH . O 6 HOH A 8 311 311 HOH HOH . O 6 HOH A 9 312 312 HOH HOH . O 6 HOH A 10 313 313 HOH HOH . O 6 HOH A 11 314 314 HOH HOH . O 6 HOH A 12 315 315 HOH HOH . O 6 HOH A 13 316 316 HOH HOH . O 6 HOH A 14 317 317 HOH HOH . O 6 HOH A 15 318 318 HOH HOH . O 6 HOH A 16 319 319 HOH HOH . O 6 HOH A 17 320 320 HOH HOH . O 6 HOH A 18 321 321 HOH HOH . O 6 HOH A 19 322 322 HOH HOH . O 6 HOH A 20 323 323 HOH HOH . O 6 HOH A 21 324 324 HOH HOH . O 6 HOH A 22 325 325 HOH HOH . O 6 HOH A 23 326 326 HOH HOH . O 6 HOH A 24 327 327 HOH HOH . O 6 HOH A 25 328 328 HOH HOH . O 6 HOH A 26 329 329 HOH HOH . O 6 HOH A 27 330 330 HOH HOH . O 6 HOH A 28 331 331 HOH HOH . O 6 HOH A 29 332 332 HOH HOH . O 6 HOH A 30 333 333 HOH HOH . O 6 HOH A 31 334 334 HOH HOH . O 6 HOH A 32 335 335 HOH HOH . O 6 HOH A 33 336 336 HOH HOH . O 6 HOH A 34 337 337 HOH HOH . O 6 HOH A 35 338 338 HOH HOH . O 6 HOH A 36 339 339 HOH HOH . O 6 HOH A 37 340 340 HOH HOH . O 6 HOH A 38 341 341 HOH HOH . O 6 HOH A 39 342 342 HOH HOH . O 6 HOH A 40 343 343 HOH HOH . O 6 HOH A 41 344 344 HOH HOH . O 6 HOH A 42 345 345 HOH HOH . O 6 HOH A 43 346 346 HOH HOH . O 6 HOH A 44 347 347 HOH HOH . O 6 HOH A 45 348 348 HOH HOH . O 6 HOH A 46 349 349 HOH HOH . O 6 HOH A 47 350 350 HOH HOH . O 6 HOH A 48 351 351 HOH HOH . O 6 HOH A 49 352 352 HOH HOH . O 6 HOH A 50 353 353 HOH HOH . O 6 HOH A 51 354 354 HOH HOH . O 6 HOH A 52 355 355 HOH HOH . O 6 HOH A 53 356 356 HOH HOH . O 6 HOH A 54 357 357 HOH HOH . O 6 HOH A 55 358 358 HOH HOH . O 6 HOH A 56 359 359 HOH HOH . O 6 HOH A 57 360 360 HOH HOH . O 6 HOH A 58 361 361 HOH HOH . O 6 HOH A 59 362 362 HOH HOH . O 6 HOH A 60 363 363 HOH HOH . O 6 HOH A 61 364 364 HOH HOH . O 6 HOH A 62 365 365 HOH HOH . O 6 HOH A 63 366 366 HOH HOH . O 6 HOH A 64 367 367 HOH HOH . O 6 HOH A 65 368 368 HOH HOH . O 6 HOH A 66 369 369 HOH HOH . O 6 HOH A 67 370 370 HOH HOH . O 6 HOH A 68 371 371 HOH HOH . O 6 HOH A 69 372 372 HOH HOH . O 6 HOH A 70 373 373 HOH HOH . O 6 HOH A 71 374 374 HOH HOH . O 6 HOH A 72 375 375 HOH HOH . O 6 HOH A 73 376 376 HOH HOH . O 6 HOH A 74 377 377 HOH HOH . O 6 HOH A 75 378 378 HOH HOH . P 6 HOH B 1 149 149 HOH HOH . P 6 HOH B 2 150 150 HOH HOH . P 6 HOH B 3 151 151 HOH HOH . P 6 HOH B 4 152 152 HOH HOH . P 6 HOH B 5 153 153 HOH HOH . P 6 HOH B 6 154 154 HOH HOH . P 6 HOH B 7 155 155 HOH HOH . P 6 HOH B 8 156 156 HOH HOH . P 6 HOH B 9 157 157 HOH HOH . P 6 HOH B 10 158 158 HOH HOH . Q 6 HOH D 1 304 304 HOH HOH . Q 6 HOH D 2 305 305 HOH HOH . Q 6 HOH D 3 306 306 HOH HOH . Q 6 HOH D 4 307 307 HOH HOH . Q 6 HOH D 5 308 308 HOH HOH . Q 6 HOH D 6 309 309 HOH HOH . Q 6 HOH D 7 310 310 HOH HOH . Q 6 HOH D 8 311 311 HOH HOH . Q 6 HOH D 9 312 312 HOH HOH . Q 6 HOH D 10 313 313 HOH HOH . Q 6 HOH D 11 314 314 HOH HOH . Q 6 HOH D 12 315 315 HOH HOH . Q 6 HOH D 13 316 316 HOH HOH . Q 6 HOH D 14 317 317 HOH HOH . Q 6 HOH D 15 318 318 HOH HOH . Q 6 HOH D 16 319 319 HOH HOH . Q 6 HOH D 17 320 320 HOH HOH . Q 6 HOH D 18 321 321 HOH HOH . Q 6 HOH D 19 322 322 HOH HOH . Q 6 HOH D 20 323 323 HOH HOH . Q 6 HOH D 21 324 324 HOH HOH . Q 6 HOH D 22 325 325 HOH HOH . Q 6 HOH D 23 326 326 HOH HOH . Q 6 HOH D 24 327 327 HOH HOH . Q 6 HOH D 25 328 328 HOH HOH . Q 6 HOH D 26 329 329 HOH HOH . Q 6 HOH D 27 330 330 HOH HOH . Q 6 HOH D 28 331 331 HOH HOH . Q 6 HOH D 29 332 332 HOH HOH . Q 6 HOH D 30 333 333 HOH HOH . Q 6 HOH D 31 334 334 HOH HOH . Q 6 HOH D 32 335 335 HOH HOH . Q 6 HOH D 33 336 336 HOH HOH . Q 6 HOH D 34 337 337 HOH HOH . Q 6 HOH D 35 338 338 HOH HOH . Q 6 HOH D 36 339 339 HOH HOH . Q 6 HOH D 37 340 340 HOH HOH . Q 6 HOH D 38 341 341 HOH HOH . Q 6 HOH D 39 342 342 HOH HOH . Q 6 HOH D 40 343 343 HOH HOH . Q 6 HOH D 41 344 344 HOH HOH . Q 6 HOH D 42 345 345 HOH HOH . Q 6 HOH D 43 346 346 HOH HOH . Q 6 HOH D 44 347 347 HOH HOH . Q 6 HOH D 45 348 348 HOH HOH . Q 6 HOH D 46 349 349 HOH HOH . Q 6 HOH D 47 350 350 HOH HOH . Q 6 HOH D 48 351 351 HOH HOH . Q 6 HOH D 49 352 352 HOH HOH . Q 6 HOH D 50 353 353 HOH HOH . Q 6 HOH D 51 354 354 HOH HOH . Q 6 HOH D 52 355 355 HOH HOH . Q 6 HOH D 53 356 356 HOH HOH . Q 6 HOH D 54 357 357 HOH HOH . Q 6 HOH D 55 358 358 HOH HOH . Q 6 HOH D 56 359 359 HOH HOH . Q 6 HOH D 57 360 360 HOH HOH . Q 6 HOH D 58 361 361 HOH HOH . Q 6 HOH D 59 362 362 HOH HOH . Q 6 HOH D 60 363 363 HOH HOH . Q 6 HOH D 61 364 364 HOH HOH . Q 6 HOH D 62 365 365 HOH HOH . Q 6 HOH D 63 366 366 HOH HOH . Q 6 HOH D 64 367 367 HOH HOH . Q 6 HOH D 65 368 368 HOH HOH . Q 6 HOH D 66 369 369 HOH HOH . Q 6 HOH D 67 370 370 HOH HOH . Q 6 HOH D 68 371 371 HOH HOH . Q 6 HOH D 69 372 372 HOH HOH . Q 6 HOH D 70 373 373 HOH HOH . Q 6 HOH D 71 374 374 HOH HOH . Q 6 HOH D 72 375 375 HOH HOH . Q 6 HOH D 73 376 376 HOH HOH . Q 6 HOH D 74 377 377 HOH HOH . Q 6 HOH D 75 378 378 HOH HOH . Q 6 HOH D 76 379 379 HOH HOH . Q 6 HOH D 77 380 380 HOH HOH . Q 6 HOH D 78 381 381 HOH HOH . Q 6 HOH D 79 382 382 HOH HOH . Q 6 HOH D 80 383 383 HOH HOH . Q 6 HOH D 81 384 384 HOH HOH . Q 6 HOH D 82 385 385 HOH HOH . Q 6 HOH D 83 386 386 HOH HOH . Q 6 HOH D 84 387 387 HOH HOH . Q 6 HOH D 85 388 388 HOH HOH . Q 6 HOH D 86 389 389 HOH HOH . Q 6 HOH D 87 390 390 HOH HOH . Q 6 HOH D 88 391 391 HOH HOH . R 6 HOH E 1 148 148 HOH HOH . R 6 HOH E 2 149 149 HOH HOH . R 6 HOH E 3 150 150 HOH HOH . R 6 HOH E 4 151 151 HOH HOH . R 6 HOH E 5 152 152 HOH HOH . R 6 HOH E 6 153 153 HOH HOH . R 6 HOH E 7 154 154 HOH HOH . R 6 HOH E 8 155 155 HOH HOH . R 6 HOH E 9 156 156 HOH HOH . R 6 HOH E 10 157 157 HOH HOH . R 6 HOH E 11 158 158 HOH HOH . R 6 HOH E 12 159 159 HOH HOH . R 6 HOH E 13 160 160 HOH HOH . R 6 HOH E 14 161 161 HOH HOH . R 6 HOH E 15 162 162 HOH HOH . R 6 HOH E 16 163 163 HOH HOH . S 6 HOH G 1 304 304 HOH HOH . S 6 HOH G 2 305 305 HOH HOH . S 6 HOH G 3 306 306 HOH HOH . S 6 HOH G 4 307 307 HOH HOH . S 6 HOH G 5 308 308 HOH HOH . S 6 HOH G 6 309 309 HOH HOH . S 6 HOH G 7 310 310 HOH HOH . S 6 HOH G 8 311 311 HOH HOH . S 6 HOH G 9 312 312 HOH HOH . S 6 HOH G 10 313 313 HOH HOH . S 6 HOH G 11 314 314 HOH HOH . S 6 HOH G 12 315 315 HOH HOH . S 6 HOH G 13 316 316 HOH HOH . S 6 HOH G 14 317 317 HOH HOH . S 6 HOH G 15 318 318 HOH HOH . S 6 HOH G 16 319 319 HOH HOH . S 6 HOH G 17 320 320 HOH HOH . S 6 HOH G 18 321 321 HOH HOH . S 6 HOH G 19 322 322 HOH HOH . S 6 HOH G 20 323 323 HOH HOH . S 6 HOH G 21 324 324 HOH HOH . S 6 HOH G 22 325 325 HOH HOH . S 6 HOH G 23 326 326 HOH HOH . S 6 HOH G 24 327 327 HOH HOH . S 6 HOH G 25 328 328 HOH HOH . S 6 HOH G 26 329 329 HOH HOH . S 6 HOH G 27 330 330 HOH HOH . S 6 HOH G 28 331 331 HOH HOH . S 6 HOH G 29 332 332 HOH HOH . S 6 HOH G 30 333 333 HOH HOH . S 6 HOH G 31 334 334 HOH HOH . S 6 HOH G 32 335 335 HOH HOH . S 6 HOH G 33 336 336 HOH HOH . S 6 HOH G 34 337 337 HOH HOH . S 6 HOH G 35 338 338 HOH HOH . S 6 HOH G 36 339 339 HOH HOH . S 6 HOH G 37 340 340 HOH HOH . S 6 HOH G 38 341 341 HOH HOH . S 6 HOH G 39 342 342 HOH HOH . S 6 HOH G 40 343 343 HOH HOH . S 6 HOH G 41 344 344 HOH HOH . S 6 HOH G 42 345 345 HOH HOH . S 6 HOH G 43 346 346 HOH HOH . S 6 HOH G 44 347 347 HOH HOH . S 6 HOH G 45 348 348 HOH HOH . S 6 HOH G 46 349 349 HOH HOH . S 6 HOH G 47 350 350 HOH HOH . S 6 HOH G 48 351 351 HOH HOH . T 6 HOH H 1 176 176 HOH HOH . T 6 HOH H 2 226 226 HOH HOH . T 6 HOH H 3 227 227 HOH HOH . T 6 HOH H 4 228 228 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CE 2MM . . . I 5 24.136 34.483 -47.653 1 66.31 ? CE 2MM 1 B 1 HETATM 2 S SD 2MM . . . I 5 24.578 33.238 -48.834 1 67.94 ? SD 2MM 1 B 1 HETATM 3 C CG 2MM . . . I 5 22.98 32.622 -49.362 1 57.39 ? CG 2MM 1 B 1 HETATM 4 C CB 2MM . . . I 5 23.099 31.125 -49.706 1 53.89 ? CB 2MM 1 B 1 HETATM 5 C CA 2MM . . . I 5 21.833 30.382 -50.093 1 52.98 ? CA 2MM 1 B 1 HETATM 6 C C 2MM . . . I 5 21.087 31.306 -50.998 1 53.32 ? C 2MM 1 B 1 HETATM 7 O O 2MM . . . I 5 21.468 31.474 -52.164 1 56.9 ? O 2MM 1 B 1 HETATM 8 N N 2MM . . . I 5 22.109 29.011 -50.686 1 51.62 ? N 2MM 1 B 1 HETATM 9 C CN2 2MM . . . I 5 22.632 28.964 -52.061 1 49.19 ? CN2 2MM 1 B 1 HETATM 10 C CN1 2MM . . . I 5 20.89 28.185 -50.721 1 50.48 ? CN1 2MM 1 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #