data_3CKZ # _model_server_result.job_id dhwgy5pzi6TaD4YpGMJCzg _model_server_result.datetime_utc '2024-11-07 14:31:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ckz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3CKZ # _exptl.entry_id 3CKZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CKZ _cell.length_a 115.146 _cell.length_b 115.146 _cell.length_c 64.197 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CKZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 y+1/2,-x-1/2,z 0 1 0 -1 0 0 0 0 1 57.573 -57.573 0 3 'crystal symmetry operation' 3_445 -y-1/2,x-1/2,z 0 -1 0 1 0 0 0 0 1 -57.573 -57.573 0 4 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -115.146 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 92 1_555 A SG CYS 335 A CYS 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 42 A CYS 124 1_555 A SG CYS 47 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf3 A SG CYS 102 A CYS 183 1_555 A SG CYS 149 A CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 A SG CYS 151 A CYS 232 1_555 A SG CYS 156 A CYS 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf5 A SG CYS 197 A CYS 278 1_555 A SG CYS 210 A CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf6 A SG CYS 199 A CYS 280 1_555 A SG CYS 208 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 A SG CYS 236 A CYS 318 1_555 A SG CYS 253 A CYS 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf8 A SG CYS 339 A CYS 421 1_555 A SG CYS 364 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc1 B CA CA . A CA 1 1_555 A O ASP 212 A ASP 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc2 B CA CA . A CA 1 1_555 A O GLY 216 A GLY 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc3 B CA CA . A CA 1 1_555 A OD1 ASP 242 A ASP 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc4 B CA CA . A CA 1 1_555 A O GLY 260 A GLY 345 1_555 ? ? ? A ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc5 B CA CA . A CA 1 1_555 A O TYR 262 A TYR 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc6 B CA CA . A CA 1 1_555 D O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CKZ _atom_sites.fract_transf_matrix[1][1] 0.008685 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015577 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1 1 CA CA . C 3 ZMR A 1 469 254 ZMR ZMR . D 4 HOH A 1 470 1 HOH HOH . D 4 HOH A 2 471 2 HOH HOH . D 4 HOH A 3 472 3 HOH HOH . D 4 HOH A 4 473 4 HOH HOH . D 4 HOH A 5 474 5 HOH HOH . D 4 HOH A 6 475 6 HOH HOH . D 4 HOH A 7 476 7 HOH HOH . D 4 HOH A 8 477 8 HOH HOH . D 4 HOH A 9 478 9 HOH HOH . D 4 HOH A 10 479 10 HOH HOH . D 4 HOH A 11 480 11 HOH HOH . D 4 HOH A 12 481 12 HOH HOH . D 4 HOH A 13 482 13 HOH HOH . D 4 HOH A 14 483 14 HOH HOH . D 4 HOH A 15 484 15 HOH HOH . D 4 HOH A 16 485 16 HOH HOH . D 4 HOH A 17 486 17 HOH HOH . D 4 HOH A 18 487 18 HOH HOH . D 4 HOH A 19 488 19 HOH HOH . D 4 HOH A 20 489 20 HOH HOH . D 4 HOH A 21 490 21 HOH HOH . D 4 HOH A 22 491 22 HOH HOH . D 4 HOH A 23 492 23 HOH HOH . D 4 HOH A 24 493 24 HOH HOH . D 4 HOH A 25 494 25 HOH HOH . D 4 HOH A 26 495 26 HOH HOH . D 4 HOH A 27 496 27 HOH HOH . D 4 HOH A 28 497 28 HOH HOH . D 4 HOH A 29 498 29 HOH HOH . D 4 HOH A 30 499 30 HOH HOH . D 4 HOH A 31 500 31 HOH HOH . D 4 HOH A 32 501 32 HOH HOH . D 4 HOH A 33 502 33 HOH HOH . D 4 HOH A 34 503 34 HOH HOH . D 4 HOH A 35 504 35 HOH HOH . D 4 HOH A 36 505 36 HOH HOH . D 4 HOH A 37 506 37 HOH HOH . D 4 HOH A 38 507 38 HOH HOH . D 4 HOH A 39 508 39 HOH HOH . D 4 HOH A 40 509 40 HOH HOH . D 4 HOH A 41 510 41 HOH HOH . D 4 HOH A 42 511 42 HOH HOH . D 4 HOH A 43 512 43 HOH HOH . D 4 HOH A 44 513 44 HOH HOH . D 4 HOH A 45 514 45 HOH HOH . D 4 HOH A 46 515 46 HOH HOH . D 4 HOH A 47 516 47 HOH HOH . D 4 HOH A 48 517 48 HOH HOH . D 4 HOH A 49 518 49 HOH HOH . D 4 HOH A 50 519 50 HOH HOH . D 4 HOH A 51 520 51 HOH HOH . D 4 HOH A 52 521 52 HOH HOH . D 4 HOH A 53 522 53 HOH HOH . D 4 HOH A 54 523 54 HOH HOH . D 4 HOH A 55 524 55 HOH HOH . D 4 HOH A 56 525 56 HOH HOH . D 4 HOH A 57 526 57 HOH HOH . D 4 HOH A 58 527 58 HOH HOH . D 4 HOH A 59 528 59 HOH HOH . D 4 HOH A 60 529 60 HOH HOH . D 4 HOH A 61 530 61 HOH HOH . D 4 HOH A 62 531 62 HOH HOH . D 4 HOH A 63 532 63 HOH HOH . D 4 HOH A 64 533 64 HOH HOH . D 4 HOH A 65 534 65 HOH HOH . D 4 HOH A 66 535 66 HOH HOH . D 4 HOH A 67 536 67 HOH HOH . D 4 HOH A 68 537 68 HOH HOH . D 4 HOH A 69 538 69 HOH HOH . D 4 HOH A 70 539 70 HOH HOH . D 4 HOH A 71 540 71 HOH HOH . D 4 HOH A 72 541 72 HOH HOH . D 4 HOH A 73 542 73 HOH HOH . D 4 HOH A 74 543 74 HOH HOH . D 4 HOH A 75 544 75 HOH HOH . D 4 HOH A 76 545 76 HOH HOH . D 4 HOH A 77 546 77 HOH HOH . D 4 HOH A 78 547 78 HOH HOH . D 4 HOH A 79 548 79 HOH HOH . D 4 HOH A 80 549 80 HOH HOH . D 4 HOH A 81 550 81 HOH HOH . D 4 HOH A 82 551 82 HOH HOH . D 4 HOH A 83 552 83 HOH HOH . D 4 HOH A 84 553 84 HOH HOH . D 4 HOH A 85 554 85 HOH HOH . D 4 HOH A 86 555 86 HOH HOH . D 4 HOH A 87 556 87 HOH HOH . D 4 HOH A 88 557 88 HOH HOH . D 4 HOH A 89 558 89 HOH HOH . D 4 HOH A 90 559 90 HOH HOH . D 4 HOH A 91 560 91 HOH HOH . D 4 HOH A 92 561 92 HOH HOH . D 4 HOH A 93 562 93 HOH HOH . D 4 HOH A 94 563 94 HOH HOH . D 4 HOH A 95 564 95 HOH HOH . D 4 HOH A 96 565 96 HOH HOH . D 4 HOH A 97 566 97 HOH HOH . D 4 HOH A 98 567 98 HOH HOH . D 4 HOH A 99 568 99 HOH HOH . D 4 HOH A 100 569 100 HOH HOH . D 4 HOH A 101 570 101 HOH HOH . D 4 HOH A 102 571 102 HOH HOH . D 4 HOH A 103 572 103 HOH HOH . D 4 HOH A 104 573 104 HOH HOH . D 4 HOH A 105 574 105 HOH HOH . D 4 HOH A 106 575 106 HOH HOH . D 4 HOH A 107 576 107 HOH HOH . D 4 HOH A 108 577 108 HOH HOH . D 4 HOH A 109 578 109 HOH HOH . D 4 HOH A 110 579 110 HOH HOH . D 4 HOH A 111 580 111 HOH HOH . D 4 HOH A 112 581 112 HOH HOH . D 4 HOH A 113 582 113 HOH HOH . D 4 HOH A 114 583 114 HOH HOH . D 4 HOH A 115 584 115 HOH HOH . D 4 HOH A 116 585 116 HOH HOH . D 4 HOH A 117 586 117 HOH HOH . D 4 HOH A 118 587 118 HOH HOH . D 4 HOH A 119 588 119 HOH HOH . D 4 HOH A 120 589 120 HOH HOH . D 4 HOH A 121 590 121 HOH HOH . D 4 HOH A 122 591 122 HOH HOH . D 4 HOH A 123 592 123 HOH HOH . D 4 HOH A 124 593 124 HOH HOH . D 4 HOH A 125 594 125 HOH HOH . D 4 HOH A 126 595 126 HOH HOH . D 4 HOH A 127 596 127 HOH HOH . D 4 HOH A 128 597 128 HOH HOH . D 4 HOH A 129 598 129 HOH HOH . D 4 HOH A 130 599 130 HOH HOH . D 4 HOH A 131 600 131 HOH HOH . D 4 HOH A 132 601 132 HOH HOH . D 4 HOH A 133 602 133 HOH HOH . D 4 HOH A 134 603 134 HOH HOH . D 4 HOH A 135 604 135 HOH HOH . D 4 HOH A 136 605 136 HOH HOH . D 4 HOH A 137 606 137 HOH HOH . D 4 HOH A 138 607 138 HOH HOH . D 4 HOH A 139 608 139 HOH HOH . D 4 HOH A 140 609 140 HOH HOH . D 4 HOH A 141 610 141 HOH HOH . D 4 HOH A 142 611 142 HOH HOH . D 4 HOH A 143 612 143 HOH HOH . D 4 HOH A 144 613 144 HOH HOH . D 4 HOH A 145 614 145 HOH HOH . D 4 HOH A 146 615 146 HOH HOH . D 4 HOH A 147 616 147 HOH HOH . D 4 HOH A 148 617 148 HOH HOH . D 4 HOH A 149 618 149 HOH HOH . D 4 HOH A 150 619 150 HOH HOH . D 4 HOH A 151 620 151 HOH HOH . D 4 HOH A 152 621 152 HOH HOH . D 4 HOH A 153 622 153 HOH HOH . D 4 HOH A 154 623 154 HOH HOH . D 4 HOH A 155 624 155 HOH HOH . D 4 HOH A 156 625 156 HOH HOH . D 4 HOH A 157 626 157 HOH HOH . D 4 HOH A 158 627 158 HOH HOH . D 4 HOH A 159 628 159 HOH HOH . D 4 HOH A 160 629 160 HOH HOH . D 4 HOH A 161 630 161 HOH HOH . D 4 HOH A 162 631 162 HOH HOH . D 4 HOH A 163 632 163 HOH HOH . D 4 HOH A 164 633 164 HOH HOH . D 4 HOH A 165 634 165 HOH HOH . D 4 HOH A 166 635 166 HOH HOH . D 4 HOH A 167 636 167 HOH HOH . D 4 HOH A 168 637 168 HOH HOH . D 4 HOH A 169 638 169 HOH HOH . D 4 HOH A 170 639 170 HOH HOH . D 4 HOH A 171 640 171 HOH HOH . D 4 HOH A 172 641 172 HOH HOH . D 4 HOH A 173 642 173 HOH HOH . D 4 HOH A 174 643 174 HOH HOH . D 4 HOH A 175 644 175 HOH HOH . D 4 HOH A 176 645 176 HOH HOH . D 4 HOH A 177 646 177 HOH HOH . D 4 HOH A 178 647 178 HOH HOH . D 4 HOH A 179 648 179 HOH HOH . D 4 HOH A 180 649 180 HOH HOH . D 4 HOH A 181 650 181 HOH HOH . D 4 HOH A 182 651 182 HOH HOH . D 4 HOH A 183 652 183 HOH HOH . D 4 HOH A 184 653 184 HOH HOH . D 4 HOH A 185 654 185 HOH HOH . D 4 HOH A 186 655 186 HOH HOH . D 4 HOH A 187 656 187 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -39.482 _atom_site.Cartn_y -46.988 _atom_site.Cartn_z 9.317 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #