data_3CL0 # _model_server_result.job_id VmE-Vi-B51OBf3Bo8PtQcg _model_server_result.datetime_utc '2024-11-25 09:48:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cl0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":800}' # _entry.id 3CL0 # _exptl.entry_id 3CL0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 284.351 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CL0 _cell.length_a 115.066 _cell.length_b 115.066 _cell.length_c 63.321 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 y+1/2,-x-1/2,z 0 1 0 -1 0 0 0 0 1 57.533 -57.533 0 3 'crystal symmetry operation' 3_445 -y-1/2,x-1/2,z 0 -1 0 1 0 0 0 0 1 -57.533 -57.533 0 4 'crystal symmetry operation' 2_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 0 -115.066 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 92 1_555 A SG CYS 335 A CYS 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 A SG CYS 42 A CYS 124 1_555 A SG CYS 47 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf3 A SG CYS 102 A CYS 183 1_555 A SG CYS 149 A CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf4 A SG CYS 151 A CYS 232 1_555 A SG CYS 156 A CYS 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf5 A SG CYS 197 A CYS 278 1_555 A SG CYS 210 A CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf6 A SG CYS 199 A CYS 280 1_555 A SG CYS 208 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf7 A SG CYS 236 A CYS 318 1_555 A SG CYS 253 A CYS 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf8 A SG CYS 339 A CYS 421 1_555 A SG CYS 364 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc1 C CA CA . A CA 1 1_555 A O ASP 212 A ASP 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc2 C CA CA . A CA 1 1_555 A O GLY 216 A GLY 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc3 C CA CA . A CA 1 1_555 A OD1 ASP 242 A ASP 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc4 C CA CA . A CA 1 1_555 A O GLY 260 A GLY 345 1_555 ? ? ? A ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc5 C CA CA . A CA 1 1_555 A O TYR 262 A TYR 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc6 C CA CA . A CA 1 1_555 D O HOH . A HOH 972 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? # _chem_comp.formula 'C14 H24 N2 O4' _chem_comp.formula_weight 284.351 _chem_comp.id G39 _chem_comp.mon_nstd_flag . _chem_comp.name '(3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Oseltamivir carboxylate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1A G39 doub 83 n n C1 O1B G39 sing 84 n n C1 C2 G39 sing 85 n n O1B HO1 G39 sing 86 n n C2 C3 G39 sing 87 n n C2 C7 G39 doub 88 n n C3 C4 G39 sing 89 n n C3 H31 G39 sing 90 n n C3 H32 G39 sing 91 n n C4 C5 G39 sing 92 n n C4 N4 G39 sing 93 n n C4 H4 G39 sing 94 n n C5 N5 G39 sing 95 n n C5 C6 G39 sing 96 n n C5 H5 G39 sing 97 n n N5 C10 G39 sing 98 n n N5 HN5 G39 sing 99 n n C10 O10 G39 doub 100 n n C10 C11 G39 sing 101 n n C11 H111 G39 sing 102 n n C11 H112 G39 sing 103 n n C11 H113 G39 sing 104 n n C6 C7 G39 sing 105 n n C6 O7 G39 sing 106 n n C6 H6 G39 sing 107 n n C7 H7 G39 sing 108 n n O7 C8 G39 sing 109 n n C8 C9 G39 sing 110 n n C8 C81 G39 sing 111 n n C8 H8 G39 sing 112 n n C9 C91 G39 sing 113 n n C9 H91 G39 sing 114 n n C9 H92 G39 sing 115 n n C81 C82 G39 sing 116 n n C81 H811 G39 sing 117 n n C81 H812 G39 sing 118 n n C82 H821 G39 sing 119 n n C82 H822 G39 sing 120 n n C82 H823 G39 sing 121 n n C91 H911 G39 sing 122 n n C91 H912 G39 sing 123 n n C91 H913 G39 sing 124 n n N4 HN41 G39 sing 125 n n N4 HN42 G39 sing 126 n n # _atom_sites.entry_id 3CL0 _atom_sites.fract_transf_matrix[1][1] 0.008691 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G39 A 1 800 800 G39 G39 . C 3 CA A 1 1 1 CA CA . D 4 HOH A 1 801 1 HOH HOH . D 4 HOH A 2 802 2 HOH HOH . D 4 HOH A 3 803 3 HOH HOH . D 4 HOH A 4 804 4 HOH HOH . D 4 HOH A 5 805 5 HOH HOH . D 4 HOH A 6 806 6 HOH HOH . D 4 HOH A 7 807 7 HOH HOH . D 4 HOH A 8 808 8 HOH HOH . D 4 HOH A 9 809 9 HOH HOH . D 4 HOH A 10 810 10 HOH HOH . D 4 HOH A 11 811 11 HOH HOH . D 4 HOH A 12 812 12 HOH HOH . D 4 HOH A 13 813 13 HOH HOH . D 4 HOH A 14 814 14 HOH HOH . D 4 HOH A 15 815 15 HOH HOH . D 4 HOH A 16 816 16 HOH HOH . D 4 HOH A 17 817 17 HOH HOH . D 4 HOH A 18 818 18 HOH HOH . D 4 HOH A 19 819 19 HOH HOH . D 4 HOH A 20 820 20 HOH HOH . D 4 HOH A 21 821 21 HOH HOH . D 4 HOH A 22 822 22 HOH HOH . D 4 HOH A 23 823 23 HOH HOH . D 4 HOH A 24 824 24 HOH HOH . D 4 HOH A 25 825 25 HOH HOH . D 4 HOH A 26 826 26 HOH HOH . D 4 HOH A 27 827 27 HOH HOH . D 4 HOH A 28 828 28 HOH HOH . D 4 HOH A 29 829 29 HOH HOH . D 4 HOH A 30 830 30 HOH HOH . D 4 HOH A 31 831 31 HOH HOH . D 4 HOH A 32 832 32 HOH HOH . D 4 HOH A 33 833 33 HOH HOH . D 4 HOH A 34 834 34 HOH HOH . D 4 HOH A 35 835 35 HOH HOH . D 4 HOH A 36 836 36 HOH HOH . D 4 HOH A 37 837 37 HOH HOH . D 4 HOH A 38 838 38 HOH HOH . D 4 HOH A 39 839 39 HOH HOH . D 4 HOH A 40 840 40 HOH HOH . D 4 HOH A 41 841 41 HOH HOH . D 4 HOH A 42 842 42 HOH HOH . D 4 HOH A 43 843 43 HOH HOH . D 4 HOH A 44 844 44 HOH HOH . D 4 HOH A 45 845 45 HOH HOH . D 4 HOH A 46 846 46 HOH HOH . D 4 HOH A 47 847 47 HOH HOH . D 4 HOH A 48 848 48 HOH HOH . D 4 HOH A 49 849 49 HOH HOH . D 4 HOH A 50 850 50 HOH HOH . D 4 HOH A 51 851 51 HOH HOH . D 4 HOH A 52 852 52 HOH HOH . D 4 HOH A 53 853 53 HOH HOH . D 4 HOH A 54 854 54 HOH HOH . D 4 HOH A 55 855 55 HOH HOH . D 4 HOH A 56 856 56 HOH HOH . D 4 HOH A 57 857 57 HOH HOH . D 4 HOH A 58 858 58 HOH HOH . D 4 HOH A 59 859 59 HOH HOH . D 4 HOH A 60 860 60 HOH HOH . D 4 HOH A 61 861 61 HOH HOH . D 4 HOH A 62 862 62 HOH HOH . D 4 HOH A 63 863 63 HOH HOH . D 4 HOH A 64 864 64 HOH HOH . D 4 HOH A 65 865 65 HOH HOH . D 4 HOH A 66 866 66 HOH HOH . D 4 HOH A 67 867 67 HOH HOH . D 4 HOH A 68 868 68 HOH HOH . D 4 HOH A 69 869 69 HOH HOH . D 4 HOH A 70 870 70 HOH HOH . D 4 HOH A 71 871 71 HOH HOH . D 4 HOH A 72 872 72 HOH HOH . D 4 HOH A 73 873 73 HOH HOH . D 4 HOH A 74 874 74 HOH HOH . D 4 HOH A 75 875 75 HOH HOH . D 4 HOH A 76 876 76 HOH HOH . D 4 HOH A 77 877 77 HOH HOH . D 4 HOH A 78 878 78 HOH HOH . D 4 HOH A 79 879 79 HOH HOH . D 4 HOH A 80 880 80 HOH HOH . D 4 HOH A 81 881 81 HOH HOH . D 4 HOH A 82 882 82 HOH HOH . D 4 HOH A 83 883 83 HOH HOH . D 4 HOH A 84 884 84 HOH HOH . D 4 HOH A 85 885 85 HOH HOH . D 4 HOH A 86 886 86 HOH HOH . D 4 HOH A 87 887 87 HOH HOH . D 4 HOH A 88 888 88 HOH HOH . D 4 HOH A 89 889 89 HOH HOH . D 4 HOH A 90 890 90 HOH HOH . D 4 HOH A 91 891 91 HOH HOH . D 4 HOH A 92 892 92 HOH HOH . D 4 HOH A 93 893 93 HOH HOH . D 4 HOH A 94 894 94 HOH HOH . D 4 HOH A 95 895 95 HOH HOH . D 4 HOH A 96 896 96 HOH HOH . D 4 HOH A 97 897 97 HOH HOH . D 4 HOH A 98 898 98 HOH HOH . D 4 HOH A 99 899 99 HOH HOH . D 4 HOH A 100 900 100 HOH HOH . D 4 HOH A 101 901 101 HOH HOH . D 4 HOH A 102 902 102 HOH HOH . D 4 HOH A 103 903 103 HOH HOH . D 4 HOH A 104 904 104 HOH HOH . D 4 HOH A 105 905 105 HOH HOH . D 4 HOH A 106 906 106 HOH HOH . D 4 HOH A 107 907 107 HOH HOH . D 4 HOH A 108 908 108 HOH HOH . D 4 HOH A 109 909 109 HOH HOH . D 4 HOH A 110 910 110 HOH HOH . D 4 HOH A 111 911 111 HOH HOH . D 4 HOH A 112 912 112 HOH HOH . D 4 HOH A 113 913 113 HOH HOH . D 4 HOH A 114 914 114 HOH HOH . D 4 HOH A 115 915 115 HOH HOH . D 4 HOH A 116 916 116 HOH HOH . D 4 HOH A 117 917 117 HOH HOH . D 4 HOH A 118 918 118 HOH HOH . D 4 HOH A 119 919 119 HOH HOH . D 4 HOH A 120 920 120 HOH HOH . D 4 HOH A 121 921 121 HOH HOH . D 4 HOH A 122 922 122 HOH HOH . D 4 HOH A 123 923 123 HOH HOH . D 4 HOH A 124 924 124 HOH HOH . D 4 HOH A 125 925 125 HOH HOH . D 4 HOH A 126 926 126 HOH HOH . D 4 HOH A 127 927 127 HOH HOH . D 4 HOH A 128 928 128 HOH HOH . D 4 HOH A 129 929 129 HOH HOH . D 4 HOH A 130 930 130 HOH HOH . D 4 HOH A 131 931 131 HOH HOH . D 4 HOH A 132 932 132 HOH HOH . D 4 HOH A 133 933 133 HOH HOH . D 4 HOH A 134 934 134 HOH HOH . D 4 HOH A 135 935 135 HOH HOH . D 4 HOH A 136 936 136 HOH HOH . D 4 HOH A 137 937 137 HOH HOH . D 4 HOH A 138 938 138 HOH HOH . D 4 HOH A 139 939 139 HOH HOH . D 4 HOH A 140 940 140 HOH HOH . D 4 HOH A 141 941 141 HOH HOH . D 4 HOH A 142 942 142 HOH HOH . D 4 HOH A 143 943 143 HOH HOH . D 4 HOH A 144 944 144 HOH HOH . D 4 HOH A 145 945 145 HOH HOH . D 4 HOH A 146 946 146 HOH HOH . D 4 HOH A 147 947 147 HOH HOH . D 4 HOH A 148 948 148 HOH HOH . D 4 HOH A 149 949 149 HOH HOH . D 4 HOH A 150 950 150 HOH HOH . D 4 HOH A 151 951 151 HOH HOH . D 4 HOH A 152 952 152 HOH HOH . D 4 HOH A 153 953 153 HOH HOH . D 4 HOH A 154 954 154 HOH HOH . D 4 HOH A 155 955 155 HOH HOH . D 4 HOH A 156 956 156 HOH HOH . D 4 HOH A 157 957 157 HOH HOH . D 4 HOH A 158 958 158 HOH HOH . D 4 HOH A 159 959 160 HOH HOH . D 4 HOH A 160 960 161 HOH HOH . D 4 HOH A 161 961 162 HOH HOH . D 4 HOH A 162 962 163 HOH HOH . D 4 HOH A 163 963 164 HOH HOH . D 4 HOH A 164 964 165 HOH HOH . D 4 HOH A 165 965 166 HOH HOH . D 4 HOH A 166 966 167 HOH HOH . D 4 HOH A 167 967 168 HOH HOH . D 4 HOH A 168 968 169 HOH HOH . D 4 HOH A 169 969 170 HOH HOH . D 4 HOH A 170 970 171 HOH HOH . D 4 HOH A 171 971 172 HOH HOH . D 4 HOH A 172 972 173 HOH HOH . D 4 HOH A 173 973 174 HOH HOH . D 4 HOH A 174 974 175 HOH HOH . D 4 HOH A 175 975 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G39 . . . B 2 -30.374 -53.143 6.122 1 31.18 ? C1 G39 800 A 1 HETATM 2 O O1A G39 . . . B 2 -31.439 -52.533 5.85 1 30.3 ? O1A G39 800 A 1 HETATM 3 O O1B G39 . . . B 2 -29.257 -52.625 5.879 1 31.23 ? O1B G39 800 A 1 HETATM 4 C C2 G39 . . . B 2 -30.437 -54.486 6.725 1 30.48 ? C2 G39 800 A 1 HETATM 5 C C3 G39 . . . B 2 -29.159 -55.188 7.132 1 30.04 ? C3 G39 800 A 1 HETATM 6 C C4 G39 . . . B 2 -29.38 -56.162 8.294 1 30.37 ? C4 G39 800 A 1 HETATM 7 C C5 G39 . . . B 2 -30.627 -57.033 8.097 1 29.53 ? C5 G39 800 A 1 HETATM 8 N N5 G39 . . . B 2 -30.803 -57.955 9.206 1 28.16 ? N5 G39 800 A 1 HETATM 9 C C10 G39 . . . B 2 -30.683 -59.283 9.087 1 27.13 ? C10 G39 800 A 1 HETATM 10 O O10 G39 . . . B 2 -30.629 -59.863 8.01 1 26.14 ? O10 G39 800 A 1 HETATM 11 C C11 G39 . . . B 2 -30.611 -60.04 10.38 1 26.05 ? C11 G39 800 A 1 HETATM 12 C C6 G39 . . . B 2 -31.883 -56.178 7.937 1 30.53 ? C6 G39 800 A 1 HETATM 13 C C7 G39 . . . B 2 -31.632 -55.093 6.901 1 30.75 ? C7 G39 800 A 1 HETATM 14 O O7 G39 . . . B 2 -33.007 -56.989 7.531 1 31.8 ? O7 G39 800 A 1 HETATM 15 C C8 G39 . . . B 2 -34.158 -56.905 8.398 1 30.52 ? C8 G39 800 A 1 HETATM 16 C C9 G39 . . . B 2 -34.879 -55.553 8.283 1 31.36 ? C9 G39 800 A 1 HETATM 17 C C81 G39 . . . B 2 -35.153 -58.02 8.079 1 29.88 ? C81 G39 800 A 1 HETATM 18 C C82 G39 . . . B 2 -34.654 -59.395 8.467 1 28.23 ? C82 G39 800 A 1 HETATM 19 C C91 G39 . . . B 2 -35.425 -55.279 6.891 1 32.33 ? C91 G39 800 A 1 HETATM 20 N N4 G39 . . . B 2 -28.195 -56.994 8.43 1 30.09 ? N4 G39 800 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #