data_3CNS
#
_model_server_result.job_id            bjLH5C4uHBjIrGdtbzF6cQ 
_model_server_result.datetime_utc      '2024-11-15 03:07:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3cns 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":518}' 
#
_entry.id    3CNS 
#
_exptl.entry_id    3CNS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              263.378 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{(1S)-3-[(4-aminobutyl)amino]-1-methylpropyl}benzamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3CNS 
_cell.length_a            102.28 
_cell.length_b            215.133 
_cell.length_c            117.84 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3CNS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 221 A CYS 221 1_555 A SG CYS 238 A CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf2 B SG CYS 221 B CYS 221 1_555 B SG CYS 238 B CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
#
_chem_comp.formula           'C15 H25 N3 O' 
_chem_comp.formula_weight    263.378 
_chem_comp.id                SP8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-{(1S)-3-[(4-aminobutyl)amino]-1-methylpropyl}benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     S-Bz-MeSpermidine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAE CAD SP8 doub 381 n y 
CAE CAF SP8 sing 382 n y 
CAD CAC SP8 sing 383 n y 
CAC CAR SP8 doub 384 n y 
CAR CAS SP8 sing 385 n y 
CAS CAF SP8 doub 386 n y 
CAF CAG SP8 sing 387 n n 
CAG OAA SP8 doub 388 n n 
CAG NAH SP8 sing 389 n n 
NAH CAI SP8 sing 390 n n 
CAI CAB SP8 sing 391 n n 
CAI CAJ SP8 sing 392 n n 
CAJ CAK SP8 sing 393 n n 
CAK NAL SP8 sing 394 n n 
NAL CAM SP8 sing 395 n n 
CAM CAN SP8 sing 396 n n 
CAN CAO SP8 sing 397 n n 
CAO CAP SP8 sing 398 n n 
CAP NAQ SP8 sing 399 n n 
CAE HAE SP8 sing 400 n n 
CAD HAD SP8 sing 401 n n 
CAC HAC SP8 sing 402 n n 
CAR HAR SP8 sing 403 n n 
CAS HAS SP8 sing 404 n n 
NAH HNAH SP8 sing 405 n n 
CAI HAI SP8 sing 406 n n 
CAB HAB SP8 sing 407 n n 
CAB HABA SP8 sing 408 n n 
CAB HABB SP8 sing 409 n n 
CAJ HAJ SP8 sing 410 n n 
CAJ HAJA SP8 sing 411 n n 
CAK HAK SP8 sing 412 n n 
CAK HAKA SP8 sing 413 n n 
NAL HNAL SP8 sing 414 n n 
CAM HAM SP8 sing 415 n n 
CAM HAMA SP8 sing 416 n n 
CAN HAN SP8 sing 417 n n 
CAN HANA SP8 sing 418 n n 
CAO HAO SP8 sing 419 n n 
CAO HAOA SP8 sing 420 n n 
CAP HAP SP8 sing 421 n n 
CAP HAPA SP8 sing 422 n n 
NAQ HNAQ SP8 sing 423 n n 
NAQ HNAA SP8 sing 424 n n 
#
_atom_sites.entry_id                     3CNS 
_atom_sites.fract_transf_matrix[1][1]    0.009777 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004648 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008486 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 517 3 FAD FAD . 
D 3 SP8 A 1 518 1 SP8 SP8 . 
E 2 FAD B 1 517 4 FAD FAD . 
F 3 SP8 B 1 518 2 SP8 SP8 . 
G 4 HOH A 1 519 2 HOH TIP . 
G 4 HOH A 2 520 3 HOH TIP . 
G 4 HOH A 3 521 4 HOH TIP . 
G 4 HOH A 4 522 5 HOH TIP . 
G 4 HOH A 5 523 6 HOH TIP . 
G 4 HOH A 6 524 7 HOH TIP . 
G 4 HOH A 7 525 8 HOH TIP . 
G 4 HOH A 8 526 9 HOH TIP . 
G 4 HOH A 9 527 10 HOH TIP . 
G 4 HOH A 10 528 14 HOH TIP . 
G 4 HOH A 11 529 15 HOH TIP . 
G 4 HOH A 12 530 18 HOH TIP . 
G 4 HOH A 13 531 19 HOH TIP . 
G 4 HOH A 14 532 20 HOH TIP . 
G 4 HOH A 15 533 22 HOH TIP . 
G 4 HOH A 16 534 23 HOH TIP . 
G 4 HOH A 17 535 24 HOH TIP . 
G 4 HOH A 18 536 25 HOH TIP . 
G 4 HOH A 19 537 27 HOH TIP . 
G 4 HOH A 20 538 31 HOH TIP . 
G 4 HOH A 21 539 32 HOH TIP . 
G 4 HOH A 22 540 33 HOH TIP . 
G 4 HOH A 23 541 35 HOH TIP . 
G 4 HOH A 24 542 39 HOH TIP . 
G 4 HOH A 25 543 40 HOH TIP . 
G 4 HOH A 26 544 41 HOH TIP . 
G 4 HOH A 27 545 44 HOH TIP . 
G 4 HOH A 28 546 48 HOH TIP . 
G 4 HOH A 29 547 50 HOH TIP . 
G 4 HOH A 30 548 52 HOH TIP . 
G 4 HOH A 31 549 54 HOH TIP . 
G 4 HOH A 32 550 55 HOH TIP . 
G 4 HOH A 33 551 57 HOH TIP . 
G 4 HOH A 34 552 60 HOH TIP . 
G 4 HOH A 35 553 61 HOH TIP . 
G 4 HOH A 36 554 62 HOH TIP . 
G 4 HOH A 37 555 64 HOH TIP . 
G 4 HOH A 38 556 65 HOH TIP . 
G 4 HOH A 39 557 66 HOH TIP . 
G 4 HOH A 40 558 67 HOH TIP . 
G 4 HOH A 41 559 70 HOH TIP . 
G 4 HOH A 42 560 73 HOH TIP . 
G 4 HOH A 43 561 74 HOH TIP . 
G 4 HOH A 44 562 76 HOH TIP . 
G 4 HOH A 45 563 77 HOH TIP . 
G 4 HOH A 46 564 80 HOH TIP . 
G 4 HOH A 47 565 83 HOH TIP . 
G 4 HOH A 48 566 86 HOH TIP . 
G 4 HOH A 49 567 89 HOH TIP . 
G 4 HOH A 50 568 90 HOH TIP . 
G 4 HOH A 51 569 91 HOH TIP . 
G 4 HOH A 52 570 95 HOH TIP . 
G 4 HOH A 53 571 97 HOH TIP . 
G 4 HOH A 54 572 99 HOH TIP . 
G 4 HOH A 55 573 101 HOH TIP . 
G 4 HOH A 56 574 102 HOH TIP . 
G 4 HOH A 57 575 103 HOH TIP . 
G 4 HOH A 58 576 106 HOH TIP . 
G 4 HOH A 59 577 107 HOH TIP . 
G 4 HOH A 60 578 108 HOH TIP . 
G 4 HOH A 61 579 109 HOH TIP . 
G 4 HOH A 62 580 110 HOH TIP . 
G 4 HOH A 63 581 114 HOH TIP . 
H 4 HOH B 1 519 1 HOH TIP . 
H 4 HOH B 2 520 11 HOH TIP . 
H 4 HOH B 3 521 12 HOH TIP . 
H 4 HOH B 4 522 13 HOH TIP . 
H 4 HOH B 5 523 16 HOH TIP . 
H 4 HOH B 6 524 17 HOH TIP . 
H 4 HOH B 7 525 21 HOH TIP . 
H 4 HOH B 8 526 26 HOH TIP . 
H 4 HOH B 9 527 28 HOH TIP . 
H 4 HOH B 10 528 29 HOH TIP . 
H 4 HOH B 11 529 30 HOH TIP . 
H 4 HOH B 12 530 34 HOH TIP . 
H 4 HOH B 13 531 36 HOH TIP . 
H 4 HOH B 14 532 37 HOH TIP . 
H 4 HOH B 15 533 38 HOH TIP . 
H 4 HOH B 16 534 42 HOH TIP . 
H 4 HOH B 17 535 43 HOH TIP . 
H 4 HOH B 18 536 45 HOH TIP . 
H 4 HOH B 19 537 46 HOH TIP . 
H 4 HOH B 20 538 47 HOH TIP . 
H 4 HOH B 21 539 49 HOH TIP . 
H 4 HOH B 22 540 51 HOH TIP . 
H 4 HOH B 23 541 53 HOH TIP . 
H 4 HOH B 24 542 56 HOH TIP . 
H 4 HOH B 25 543 58 HOH TIP . 
H 4 HOH B 26 544 59 HOH TIP . 
H 4 HOH B 27 545 63 HOH TIP . 
H 4 HOH B 28 546 68 HOH TIP . 
H 4 HOH B 29 547 69 HOH TIP . 
H 4 HOH B 30 548 71 HOH TIP . 
H 4 HOH B 31 549 72 HOH TIP . 
H 4 HOH B 32 550 75 HOH TIP . 
H 4 HOH B 33 551 78 HOH TIP . 
H 4 HOH B 34 552 79 HOH TIP . 
H 4 HOH B 35 553 81 HOH TIP . 
H 4 HOH B 36 554 82 HOH TIP . 
H 4 HOH B 37 555 84 HOH TIP . 
H 4 HOH B 38 556 85 HOH TIP . 
H 4 HOH B 39 557 87 HOH TIP . 
H 4 HOH B 40 558 88 HOH TIP . 
H 4 HOH B 41 559 92 HOH TIP . 
H 4 HOH B 42 560 93 HOH TIP . 
H 4 HOH B 43 561 94 HOH TIP . 
H 4 HOH B 44 562 96 HOH TIP . 
H 4 HOH B 45 563 98 HOH TIP . 
H 4 HOH B 46 564 100 HOH TIP . 
H 4 HOH B 47 565 104 HOH TIP . 
H 4 HOH B 48 566 105 HOH TIP . 
H 4 HOH B 49 567 111 HOH TIP . 
H 4 HOH B 50 568 112 HOH TIP . 
H 4 HOH B 51 569 113 HOH TIP . 
H 4 HOH B 52 570 115 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAE SP8 . . . F 3 50.217 -51.402 -7.2 1 69.44 ? CAE SP8 518 B 1 
HETATM 2 C CAD SP8 . . . F 3 49.672 -50.15 -6.937 1 69.33 ? CAD SP8 518 B 1 
HETATM 3 C CAC SP8 . . . F 3 48.627 -50.024 -6.028 1 69.74 ? CAC SP8 518 B 1 
HETATM 4 C CAR SP8 . . . F 3 48.126 -51.15 -5.385 1 70.5 ? CAR SP8 518 B 1 
HETATM 5 C CAS SP8 . . . F 3 48.672 -52.403 -5.646 1 69.65 ? CAS SP8 518 B 1 
HETATM 6 C CAF SP8 . . . F 3 49.721 -52.527 -6.55 1 69.18 ? CAF SP8 518 B 1 
HETATM 7 C CAG SP8 . . . F 3 50.362 -53.895 -6.794 1 69.04 ? CAG SP8 518 B 1 
HETATM 8 O OAA SP8 . . . F 3 51.123 -54.074 -7.744 1 70.05 ? OAA SP8 518 B 1 
HETATM 9 N NAH SP8 . . . F 3 50.025 -54.837 -5.916 1 66.81 ? NAH SP8 518 B 1 
HETATM 10 C CAI SP8 . . . F 3 50.544 -56.212 -5.983 1 65.2 ? CAI SP8 518 B 1 
HETATM 11 C CAB SP8 . . . F 3 50.076 -56.867 -7.284 1 65.29 ? CAB SP8 518 B 1 
HETATM 12 C CAJ SP8 . . . F 3 52.072 -56.202 -5.902 1 64.23 ? CAJ SP8 518 B 1 
HETATM 13 C CAK SP8 . . . F 3 52.631 -57.624 -5.827 1 62.57 ? CAK SP8 518 B 1 
HETATM 14 N NAL SP8 . . . F 3 54.096 -57.584 -5.946 1 61.39 ? NAL SP8 518 B 1 
HETATM 15 C CAM SP8 . . . F 3 54.729 -58.255 -4.801 1 59.7 ? CAM SP8 518 B 1 
HETATM 16 C CAN SP8 . . . F 3 54.693 -57.334 -3.579 1 59.47 ? CAN SP8 518 B 1 
HETATM 17 C CAO SP8 . . . F 3 55.357 -58.005 -2.375 1 58.16 ? CAO SP8 518 B 1 
HETATM 18 C CAP SP8 . . . F 3 55.251 -57.128 -1.126 1 58.6 ? CAP SP8 518 B 1 
HETATM 19 N NAQ SP8 . . . F 3 55.81 -57.851 0.026 1 59.41 ? NAQ SP8 518 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           19 
#