data_3CP8 # _model_server_result.job_id 1vRDeemFoaehCtmTtZ77gg _model_server_result.datetime_utc '2024-11-05 11:03:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cp8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":622}' # _entry.id 3CP8 # _exptl.entry_id 3CP8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.82 _cell.angle_gamma 90 _cell.entry_id 3CP8 _cell.length_a 120.505 _cell.length_b 71.836 _cell.length_c 171.934 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F 1 1 C,D,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 3CP8 _atom_sites.fract_transf_matrix[1][1] 0.008298 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000264 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013921 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005819 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 622 622 FAD FAD . F 2 FAD B 1 622 622 FAD FAD . G 2 FAD C 1 622 622 FAD FAD . H 2 FAD D 1 622 622 FAD FAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . H 2 27.464 4.077 94.474 1 85.22 ? PA FAD 622 D 1 HETATM 2 O O1A FAD . . . H 2 26.976 2.972 95.411 1 84.89 ? O1A FAD 622 D 1 HETATM 3 O O2A FAD . . . H 2 28.634 3.637 93.6 1 83.99 ? O2A FAD 622 D 1 HETATM 4 O O5B FAD . . . H 2 27.85 5.414 95.276 1 83.2 ? O5B FAD 622 D 1 HETATM 5 C C5B FAD . . . H 2 27.446 5.656 96.589 1 81.97 ? C5B FAD 622 D 1 HETATM 6 C C4B FAD . . . H 2 28.51 6.64 97.008 1 83.41 ? C4B FAD 622 D 1 HETATM 7 O O4B FAD . . . H 2 27.924 7.861 97.376 1 83.02 ? O4B FAD 622 D 1 HETATM 8 C C3B FAD . . . H 2 29.331 6.108 98.175 1 84.73 ? C3B FAD 622 D 1 HETATM 9 O O3B FAD . . . H 2 30.696 5.988 97.785 1 85.26 ? O3B FAD 622 D 1 HETATM 10 C C2B FAD . . . H 2 29.053 7.076 99.329 1 84.64 ? C2B FAD 622 D 1 HETATM 11 O O2B FAD . . . H 2 30.246 7.488 99.973 1 85.97 ? O2B FAD 622 D 1 HETATM 12 C C1B FAD . . . H 2 28.329 8.251 98.674 1 84.29 ? C1B FAD 622 D 1 HETATM 13 N N9A FAD . . . H 2 27.093 8.665 99.346 1 84.27 ? N9A FAD 622 D 1 HETATM 14 C C8A FAD . . . H 2 25.893 7.999 99.29 1 85.01 ? C8A FAD 622 D 1 HETATM 15 N N7A FAD . . . H 2 24.955 8.691 99.992 1 84.85 ? N7A FAD 622 D 1 HETATM 16 C C5A FAD . . . H 2 25.544 9.801 100.485 1 84.38 ? C5A FAD 622 D 1 HETATM 17 C C6A FAD . . . H 2 25.047 10.837 101.273 1 84.58 ? C6A FAD 622 D 1 HETATM 18 N N6A FAD . . . H 2 23.763 10.834 101.633 1 84.39 ? N6A FAD 622 D 1 HETATM 19 N N1A FAD . . . H 2 25.886 11.886 101.647 1 85.06 ? N1A FAD 622 D 1 HETATM 20 C C2A FAD . . . H 2 27.214 11.865 101.231 1 85.01 ? C2A FAD 622 D 1 HETATM 21 N N3A FAD . . . H 2 27.703 10.821 100.445 1 84.67 ? N3A FAD 622 D 1 HETATM 22 C C4A FAD . . . H 2 26.884 9.804 100.08 1 84.31 ? C4A FAD 622 D 1 HETATM 23 N N1 FAD . . . H 2 27.515 -3.619 88.169 1 251.14 ? N1 FAD 622 D 1 HETATM 24 C C2 FAD . . . H 2 28.04 -3.795 86.896 1 251.44 ? C2 FAD 622 D 1 HETATM 25 O O2 FAD . . . H 2 28.811 -2.971 86.417 1 250.77 ? O2 FAD 622 D 1 HETATM 26 N N3 FAD . . . H 2 27.708 -4.9 86.143 1 250.75 ? N3 FAD 622 D 1 HETATM 27 C C4 FAD . . . H 2 26.843 -5.84 86.657 1 251.46 ? C4 FAD 622 D 1 HETATM 28 O O4 FAD . . . H 2 26.546 -6.826 85.981 1 250.74 ? O4 FAD 622 D 1 HETATM 29 C C4X FAD . . . H 2 26.309 -5.671 87.932 1 251.18 ? C4X FAD 622 D 1 HETATM 30 N N5 FAD . . . H 2 25.447 -6.63 88.41 1 251.83 ? N5 FAD 622 D 1 HETATM 31 C C5X FAD . . . H 2 24.908 -6.487 89.662 1 251.23 ? C5X FAD 622 D 1 HETATM 32 C C6 FAD . . . H 2 24.039 -7.472 90.124 1 251.48 ? C6 FAD 622 D 1 HETATM 33 C C7 FAD . . . H 2 23.475 -7.358 91.388 1 250.75 ? C7 FAD 622 D 1 HETATM 34 C C7M FAD . . . H 2 22.539 -8.444 91.842 1 250.52 ? C7M FAD 622 D 1 HETATM 35 C C8 FAD . . . H 2 23.801 -6.241 92.173 1 251.43 ? C8 FAD 622 D 1 HETATM 36 C C8M FAD . . . H 2 23.272 -6.007 93.545 1 250.77 ? C8M FAD 622 D 1 HETATM 37 C C9 FAD . . . H 2 24.667 -5.27 91.702 1 251.19 ? C9 FAD 622 D 1 HETATM 38 C C9A FAD . . . H 2 25.24 -5.374 90.444 1 248.18 ? C9A FAD 622 D 1 HETATM 39 N N10 FAD . . . H 2 26.094 -4.37 89.987 1 240.76 ? N10 FAD 622 D 1 HETATM 40 C C10 FAD . . . H 2 26.643 -4.553 88.711 1 247.94 ? C10 FAD 622 D 1 HETATM 41 C C1' FAD . . . H 2 25.651 -2.956 90.323 1 186.23 ? C1' FAD 622 D 1 HETATM 42 C C2' FAD . . . H 2 26.354 -2.215 91.475 1 141.78 ? C2' FAD 622 D 1 HETATM 43 O O2' FAD . . . H 2 26.353 -3.023 92.629 1 131.69 ? O2' FAD 622 D 1 HETATM 44 C C3' FAD . . . H 2 25.645 -0.887 91.814 1 117.02 ? C3' FAD 622 D 1 HETATM 45 O O3' FAD . . . H 2 24.878 -0.504 90.69 1 108.32 ? O3' FAD 622 D 1 HETATM 46 C C4' FAD . . . H 2 26.543 0.301 92.252 1 102.89 ? C4' FAD 622 D 1 HETATM 47 O O4' FAD . . . H 2 27.201 0.023 93.478 1 97.79 ? O4' FAD 622 D 1 HETATM 48 C C5' FAD . . . H 2 25.773 1.638 92.373 1 94.15 ? C5' FAD 622 D 1 HETATM 49 O O5' FAD . . . H 2 26.432 2.716 91.703 1 88.62 ? O5' FAD 622 D 1 HETATM 50 P P FAD . . . H 2 26.102 4.292 92.012 1 87.31 ? P FAD 622 D 1 HETATM 51 O O1P FAD . . . H 2 27.151 5.196 91.376 1 85.8 ? O1P FAD 622 D 1 HETATM 52 O O2P FAD . . . H 2 24.678 4.647 91.609 1 86.25 ? O2P FAD 622 D 1 HETATM 53 O O3P FAD . . . H 2 26.185 4.549 93.606 1 85.22 ? O3P FAD 622 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #