data_3CQX
#
_model_server_result.job_id            R-sACxg_Lf3RtOjjkoC1wg 
_model_server_result.datetime_utc      '2024-10-20 00:54:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3cqx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":502}' 
#
_entry.id    3CQX 
#
_exptl.entry_id    3CQX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3CQX 
_cell.length_a            52.846 
_cell.length_b            105.808 
_cell.length_c            210.683 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3CQX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ALA 35 A ALA 30 1_555 K NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.923 ? 
metalc ? metalc2 A O LYS 76 A LYS 71 1_555 J NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? 
metalc ? metalc3 A O ILE 79 A ILE 74 1_555 J NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? 
metalc ? metalc4 A N GLY 80 A GLY 75 1_555 I NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? 
metalc ? metalc5 A OE2 GLU 122 A GLU 117 1_555 I NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? 
metalc ? metalc6 A O ILE 135 A ILE 130 1_555 K NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? 
metalc ? metalc7 A OE1 GLN 159 A GLN 154 1_555 J NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? 
metalc ? metalc8 A OD2 ASP 290 A ASP 285 1_555 M NA NA . D NA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3CQX 
_atom_sites.fract_transf_matrix[1][1]    0.018923 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009451 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004746 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SCN A 1 402 402 SCN SCN . 
F 3 SCN A 1 403 403 SCN SCN . 
G 3 SCN A 1 404 404 SCN SCN . 
H 3 SCN A 1 405 405 SCN SCN . 
I 4 NA A 1 501 501 NA NA . 
J 4 NA A 1 502 502 NA NA . 
K 4 NA A 1 503 503 NA NA . 
L 3 SCN B 1 401 401 SCN SCN . 
M 4 NA D 1 504 504 NA NA . 
N 5 HOH A 1 504 1 HOH HOH . 
N 5 HOH A 2 505 2 HOH HOH . 
N 5 HOH A 3 506 3 HOH HOH . 
N 5 HOH A 4 507 4 HOH HOH . 
N 5 HOH A 5 508 5 HOH HOH . 
N 5 HOH A 6 509 6 HOH HOH . 
N 5 HOH A 7 510 7 HOH HOH . 
N 5 HOH A 8 511 8 HOH HOH . 
N 5 HOH A 9 512 9 HOH HOH . 
N 5 HOH A 10 513 10 HOH HOH . 
N 5 HOH A 11 514 11 HOH HOH . 
N 5 HOH A 12 515 12 HOH HOH . 
N 5 HOH A 13 516 13 HOH HOH . 
N 5 HOH A 14 517 14 HOH HOH . 
N 5 HOH A 15 518 15 HOH HOH . 
N 5 HOH A 16 519 16 HOH HOH . 
N 5 HOH A 17 520 17 HOH HOH . 
N 5 HOH A 18 521 18 HOH HOH . 
N 5 HOH A 19 522 19 HOH HOH . 
N 5 HOH A 20 523 20 HOH HOH . 
N 5 HOH A 21 524 21 HOH HOH . 
N 5 HOH A 22 525 22 HOH HOH . 
N 5 HOH A 23 526 23 HOH HOH . 
N 5 HOH A 24 527 24 HOH HOH . 
N 5 HOH A 25 528 25 HOH HOH . 
N 5 HOH A 26 529 26 HOH HOH . 
N 5 HOH A 27 530 27 HOH HOH . 
N 5 HOH A 28 531 28 HOH HOH . 
N 5 HOH A 29 532 29 HOH HOH . 
N 5 HOH A 30 533 30 HOH HOH . 
N 5 HOH A 31 534 31 HOH HOH . 
N 5 HOH A 32 535 32 HOH HOH . 
N 5 HOH A 33 536 33 HOH HOH . 
N 5 HOH A 34 537 34 HOH HOH . 
N 5 HOH A 35 538 35 HOH HOH . 
N 5 HOH A 36 539 36 HOH HOH . 
N 5 HOH A 37 540 37 HOH HOH . 
N 5 HOH A 38 541 38 HOH HOH . 
N 5 HOH A 39 542 39 HOH HOH . 
N 5 HOH A 40 543 40 HOH HOH . 
N 5 HOH A 41 544 41 HOH HOH . 
N 5 HOH A 42 545 42 HOH HOH . 
N 5 HOH A 43 546 43 HOH HOH . 
N 5 HOH A 44 547 44 HOH HOH . 
N 5 HOH A 45 548 45 HOH HOH . 
N 5 HOH A 46 549 46 HOH HOH . 
N 5 HOH A 47 550 47 HOH HOH . 
N 5 HOH A 48 551 48 HOH HOH . 
N 5 HOH A 49 552 50 HOH HOH . 
N 5 HOH A 50 553 51 HOH HOH . 
N 5 HOH A 51 554 52 HOH HOH . 
N 5 HOH A 52 555 53 HOH HOH . 
N 5 HOH A 53 556 54 HOH HOH . 
N 5 HOH A 54 557 55 HOH HOH . 
N 5 HOH A 55 558 56 HOH HOH . 
N 5 HOH A 56 559 57 HOH HOH . 
N 5 HOH A 57 560 58 HOH HOH . 
N 5 HOH A 58 561 191 HOH HOH . 
N 5 HOH A 59 562 192 HOH HOH . 
N 5 HOH A 60 563 193 HOH HOH . 
N 5 HOH A 61 564 194 HOH HOH . 
N 5 HOH A 62 565 195 HOH HOH . 
N 5 HOH A 63 566 196 HOH HOH . 
N 5 HOH A 64 567 197 HOH HOH . 
N 5 HOH A 65 568 198 HOH HOH . 
N 5 HOH A 66 569 221 HOH HOH . 
N 5 HOH A 67 570 222 HOH HOH . 
N 5 HOH A 68 571 223 HOH HOH . 
N 5 HOH A 69 572 224 HOH HOH . 
N 5 HOH A 70 573 225 HOH HOH . 
N 5 HOH A 71 574 230 HOH HOH . 
N 5 HOH A 72 575 231 HOH HOH . 
N 5 HOH A 73 576 233 HOH HOH . 
N 5 HOH A 74 577 234 HOH HOH . 
N 5 HOH A 75 578 235 HOH HOH . 
O 5 HOH B 1 402 59 HOH HOH . 
O 5 HOH B 2 403 60 HOH HOH . 
O 5 HOH B 3 404 61 HOH HOH . 
O 5 HOH B 4 405 62 HOH HOH . 
O 5 HOH B 5 406 63 HOH HOH . 
O 5 HOH B 6 407 64 HOH HOH . 
O 5 HOH B 7 408 65 HOH HOH . 
O 5 HOH B 8 409 66 HOH HOH . 
O 5 HOH B 9 410 67 HOH HOH . 
O 5 HOH B 10 411 68 HOH HOH . 
O 5 HOH B 11 412 69 HOH HOH . 
O 5 HOH B 12 413 70 HOH HOH . 
O 5 HOH B 13 414 71 HOH HOH . 
O 5 HOH B 14 415 72 HOH HOH . 
O 5 HOH B 15 416 73 HOH HOH . 
O 5 HOH B 16 417 74 HOH HOH . 
O 5 HOH B 17 418 75 HOH HOH . 
O 5 HOH B 18 419 76 HOH HOH . 
O 5 HOH B 19 420 77 HOH HOH . 
O 5 HOH B 20 421 78 HOH HOH . 
O 5 HOH B 21 422 79 HOH HOH . 
O 5 HOH B 22 423 80 HOH HOH . 
O 5 HOH B 23 424 81 HOH HOH . 
O 5 HOH B 24 425 82 HOH HOH . 
O 5 HOH B 25 426 83 HOH HOH . 
O 5 HOH B 26 427 84 HOH HOH . 
O 5 HOH B 27 428 85 HOH HOH . 
O 5 HOH B 28 429 86 HOH HOH . 
O 5 HOH B 29 430 87 HOH HOH . 
O 5 HOH B 30 431 88 HOH HOH . 
O 5 HOH B 31 432 89 HOH HOH . 
O 5 HOH B 32 433 90 HOH HOH . 
O 5 HOH B 33 434 91 HOH HOH . 
O 5 HOH B 34 435 93 HOH HOH . 
O 5 HOH B 35 436 94 HOH HOH . 
O 5 HOH B 36 437 95 HOH HOH . 
O 5 HOH B 37 438 96 HOH HOH . 
O 5 HOH B 38 439 97 HOH HOH . 
O 5 HOH B 39 440 98 HOH HOH . 
O 5 HOH B 40 441 99 HOH HOH . 
O 5 HOH B 41 442 100 HOH HOH . 
O 5 HOH B 42 443 101 HOH HOH . 
O 5 HOH B 43 444 102 HOH HOH . 
O 5 HOH B 44 445 103 HOH HOH . 
O 5 HOH B 45 446 104 HOH HOH . 
O 5 HOH B 46 447 105 HOH HOH . 
O 5 HOH B 47 448 106 HOH HOH . 
O 5 HOH B 48 449 107 HOH HOH . 
O 5 HOH B 49 450 108 HOH HOH . 
O 5 HOH B 50 451 109 HOH HOH . 
O 5 HOH B 51 452 110 HOH HOH . 
O 5 HOH B 52 453 111 HOH HOH . 
O 5 HOH B 53 454 112 HOH HOH . 
O 5 HOH B 54 455 113 HOH HOH . 
O 5 HOH B 55 456 114 HOH HOH . 
O 5 HOH B 56 457 115 HOH HOH . 
O 5 HOH B 57 458 116 HOH HOH . 
O 5 HOH B 58 459 117 HOH HOH . 
O 5 HOH B 59 460 118 HOH HOH . 
O 5 HOH B 60 461 119 HOH HOH . 
O 5 HOH B 61 462 120 HOH HOH . 
O 5 HOH B 62 463 121 HOH HOH . 
O 5 HOH B 63 464 122 HOH HOH . 
O 5 HOH B 64 465 123 HOH HOH . 
O 5 HOH B 65 466 124 HOH HOH . 
O 5 HOH B 66 467 125 HOH HOH . 
O 5 HOH B 67 468 126 HOH HOH . 
O 5 HOH B 68 469 127 HOH HOH . 
O 5 HOH B 69 470 128 HOH HOH . 
O 5 HOH B 70 471 129 HOH HOH . 
O 5 HOH B 71 472 130 HOH HOH . 
O 5 HOH B 72 473 131 HOH HOH . 
O 5 HOH B 73 474 132 HOH HOH . 
O 5 HOH B 74 475 133 HOH HOH . 
O 5 HOH B 75 476 134 HOH HOH . 
O 5 HOH B 76 477 135 HOH HOH . 
O 5 HOH B 77 478 136 HOH HOH . 
O 5 HOH B 78 479 137 HOH HOH . 
O 5 HOH B 79 480 138 HOH HOH . 
O 5 HOH B 80 481 139 HOH HOH . 
O 5 HOH B 81 482 140 HOH HOH . 
O 5 HOH B 82 483 141 HOH HOH . 
O 5 HOH B 83 484 142 HOH HOH . 
O 5 HOH B 84 485 143 HOH HOH . 
O 5 HOH B 85 486 144 HOH HOH . 
O 5 HOH B 86 487 145 HOH HOH . 
O 5 HOH B 87 488 146 HOH HOH . 
O 5 HOH B 88 489 147 HOH HOH . 
O 5 HOH B 89 490 148 HOH HOH . 
O 5 HOH B 90 491 149 HOH HOH . 
O 5 HOH B 91 492 151 HOH HOH . 
O 5 HOH B 92 493 152 HOH HOH . 
O 5 HOH B 93 494 153 HOH HOH . 
O 5 HOH B 94 495 154 HOH HOH . 
O 5 HOH B 95 496 155 HOH HOH . 
O 5 HOH B 96 497 156 HOH HOH . 
O 5 HOH B 97 498 162 HOH HOH . 
O 5 HOH B 98 499 163 HOH HOH . 
O 5 HOH B 99 500 164 HOH HOH . 
O 5 HOH B 100 501 165 HOH HOH . 
O 5 HOH B 101 502 166 HOH HOH . 
O 5 HOH B 102 503 167 HOH HOH . 
O 5 HOH B 103 504 168 HOH HOH . 
O 5 HOH B 104 505 169 HOH HOH . 
O 5 HOH B 105 506 170 HOH HOH . 
O 5 HOH B 106 507 171 HOH HOH . 
O 5 HOH B 107 508 172 HOH HOH . 
O 5 HOH B 108 509 173 HOH HOH . 
O 5 HOH B 109 510 174 HOH HOH . 
O 5 HOH B 110 511 175 HOH HOH . 
O 5 HOH B 111 512 176 HOH HOH . 
O 5 HOH B 112 513 177 HOH HOH . 
O 5 HOH B 113 514 178 HOH HOH . 
O 5 HOH B 114 515 179 HOH HOH . 
O 5 HOH B 115 516 180 HOH HOH . 
O 5 HOH B 116 517 181 HOH HOH . 
O 5 HOH B 117 518 182 HOH HOH . 
O 5 HOH B 118 519 183 HOH HOH . 
O 5 HOH B 119 520 184 HOH HOH . 
O 5 HOH B 120 521 185 HOH HOH . 
O 5 HOH B 121 522 199 HOH HOH . 
O 5 HOH B 122 523 200 HOH HOH . 
O 5 HOH B 123 524 201 HOH HOH . 
O 5 HOH B 124 525 204 HOH HOH . 
O 5 HOH B 125 526 205 HOH HOH . 
O 5 HOH B 126 527 206 HOH HOH . 
O 5 HOH B 127 528 207 HOH HOH . 
O 5 HOH B 128 529 208 HOH HOH . 
O 5 HOH B 129 530 209 HOH HOH . 
O 5 HOH B 130 531 211 HOH HOH . 
O 5 HOH B 131 532 212 HOH HOH . 
O 5 HOH B 132 533 213 HOH HOH . 
O 5 HOH B 133 534 214 HOH HOH . 
O 5 HOH B 134 535 215 HOH HOH . 
O 5 HOH B 135 536 216 HOH HOH . 
O 5 HOH B 136 537 217 HOH HOH . 
O 5 HOH B 137 538 218 HOH HOH . 
O 5 HOH B 138 539 219 HOH HOH . 
O 5 HOH B 139 540 220 HOH HOH . 
O 5 HOH B 140 541 226 HOH HOH . 
O 5 HOH B 141 542 227 HOH HOH . 
O 5 HOH B 142 543 228 HOH HOH . 
O 5 HOH B 143 544 229 HOH HOH . 
O 5 HOH B 144 545 232 HOH HOH . 
O 5 HOH B 145 546 236 HOH HOH . 
P 5 HOH C 1 190 92 HOH HOH . 
P 5 HOH C 2 191 150 HOH HOH . 
P 5 HOH C 3 192 157 HOH HOH . 
P 5 HOH C 4 193 158 HOH HOH . 
P 5 HOH C 5 194 159 HOH HOH . 
P 5 HOH C 6 195 160 HOH HOH . 
P 5 HOH C 7 196 161 HOH HOH . 
P 5 HOH C 8 197 186 HOH HOH . 
P 5 HOH C 9 198 187 HOH HOH . 
P 5 HOH C 10 199 189 HOH HOH . 
P 5 HOH C 11 200 190 HOH HOH . 
P 5 HOH C 12 201 202 HOH HOH . 
P 5 HOH C 13 202 203 HOH HOH . 
P 5 HOH C 14 203 237 HOH HOH . 
P 5 HOH C 15 204 238 HOH HOH . 
Q 5 HOH D 1 505 49 HOH HOH . 
Q 5 HOH D 2 506 188 HOH HOH . 
Q 5 HOH D 3 507 210 HOH HOH . 
Q 5 HOH D 4 508 239 HOH HOH . 
Q 5 HOH D 5 509 240 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               12.855 
_atom_site.Cartn_y               -49.89 
_atom_site.Cartn_z               -44.288 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        49.45 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#