data_3CR4 # _model_server_result.job_id RNQrfYP3FIoF5jqnwWtemg _model_server_result.datetime_utc '2024-11-05 21:12:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cr4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":104}' # _entry.id 3CR4 # _exptl.entry_id 3CR4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CR4 _cell.length_a 63.587 _cell.length_b 63.587 _cell.length_c 48.248 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CR4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 24.124 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 19 X SER 18 1_555 D CA CA . X CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc2 A O GLU 22 X GLU 21 1_555 D CA CA . X CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc3 A O ASP 24 X ASP 23 1_555 D CA CA . X CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc4 A O LYS 27 X LYS 26 1_555 D CA CA . X CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc5 A OE1 GLU 32 X GLU 31 1_555 D CA CA . X CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc6 A OE2 GLU 32 X GLU 31 1_555 D CA CA . X CA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc7 A OD1 ASP 62 X ASP 61 1_555 E CA CA . X CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc8 A OD1 ASP 64 X ASP 63 1_555 E CA CA . X CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc9 A OD1 ASP 66 X ASP 65 1_555 E CA CA . X CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc10 A O GLU 68 X GLU 67 1_555 E CA CA . X CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc11 A OE1 GLU 73 X GLU 72 1_555 E CA CA . X CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc12 A OE2 GLU 73 X GLU 72 1_555 E CA CA . X CA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc13 D CA CA . X CA 103 1_555 F O HOH . X HOH 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc14 E CA CA . X CA 104 1_555 F O HOH . X HOH 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CR4 _atom_sites.fract_transf_matrix[1][1] 0.015726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015726 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020726 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PNT X 1 101 101 PNT PNT . C 2 PNT X 1 102 101 PNT PNT . D 3 CA X 1 103 90 CA CA . E 3 CA X 1 104 91 CA CA . F 4 HOH X 1 105 1 HOH HOH . F 4 HOH X 2 106 2 HOH HOH . F 4 HOH X 3 107 3 HOH HOH . F 4 HOH X 4 108 4 HOH HOH . F 4 HOH X 5 109 5 HOH HOH . F 4 HOH X 6 110 6 HOH HOH . F 4 HOH X 7 111 7 HOH HOH . F 4 HOH X 8 112 8 HOH HOH . F 4 HOH X 9 113 9 HOH HOH . F 4 HOH X 10 114 10 HOH HOH . F 4 HOH X 11 115 11 HOH HOH . F 4 HOH X 12 116 12 HOH HOH . F 4 HOH X 13 117 13 HOH HOH . F 4 HOH X 14 118 14 HOH HOH . F 4 HOH X 15 119 15 HOH HOH . F 4 HOH X 16 120 16 HOH HOH . F 4 HOH X 17 121 17 HOH HOH . F 4 HOH X 18 122 18 HOH HOH . F 4 HOH X 19 123 19 HOH HOH . F 4 HOH X 20 124 20 HOH HOH . F 4 HOH X 21 125 21 HOH HOH . F 4 HOH X 22 126 22 HOH HOH . F 4 HOH X 23 127 23 HOH HOH . F 4 HOH X 24 128 24 HOH HOH . F 4 HOH X 25 129 25 HOH HOH . F 4 HOH X 26 130 26 HOH HOH . F 4 HOH X 27 131 27 HOH HOH . F 4 HOH X 28 132 28 HOH HOH . F 4 HOH X 29 133 29 HOH HOH . F 4 HOH X 30 134 30 HOH HOH . F 4 HOH X 31 135 31 HOH HOH . F 4 HOH X 32 136 32 HOH HOH . F 4 HOH X 33 137 33 HOH HOH . F 4 HOH X 34 138 34 HOH HOH . F 4 HOH X 35 139 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 21.6 _atom_site.Cartn_y -6.069 _atom_site.Cartn_z 3.066 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 104 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #