data_3CR5 # _model_server_result.job_id JBRchQQCobUqD3LKmJFW3w _model_server_result.datetime_utc '2024-11-30 09:31:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cr5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":93}' # _entry.id 3CR5 # _exptl.entry_id 3CR5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CR5 _cell.length_a 62.883 _cell.length_b 62.883 _cell.length_c 50.084 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CR5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 25.042 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 16 X HIS 15 1_555 D ZN ZN . X ZN 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc2 A O SER 19 X SER 18 1_555 E CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc3 A O GLU 22 X GLU 21 1_555 E CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc4 A O ASP 24 X ASP 23 1_555 E CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc5 A NE2 HIS 26 X HIS 25 1_555 D ZN ZN . X ZN 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc6 A O LYS 27 X LYS 26 1_555 E CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc7 A OE1 GLU 32 X GLU 31 1_555 E CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc8 A OE2 GLU 32 X GLU 31 1_555 E CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc9 A OD1 ASP 62 X ASP 61 1_555 F CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc10 A OD1 ASP 64 X ASP 63 1_555 F CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc11 A OD1 ASP 66 X ASP 65 1_555 F CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc12 A O GLU 68 X GLU 67 1_555 F CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc13 A OE1 GLU 73 X GLU 72 1_555 F CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc14 A OE2 GLU 73 X GLU 72 1_555 F CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc15 E CA CA . X CA 92 1_555 G O HOH . X HOH 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc16 F CA CA . X CA 93 1_555 G O HOH . X HOH 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CR5 _atom_sites.fract_transf_matrix[1][1] 0.015903 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PNT X 1 94 94 PNT PNT . C 2 PNT X 1 95 95 PNT PNT . D 3 ZN X 1 96 91 ZN ZN . E 4 CA X 1 92 92 CA CA . F 4 CA X 1 93 93 CA CA . G 5 HOH X 1 97 1 HOH HOH . G 5 HOH X 2 98 2 HOH HOH . G 5 HOH X 3 99 3 HOH HOH . G 5 HOH X 4 100 4 HOH HOH . G 5 HOH X 5 101 5 HOH HOH . G 5 HOH X 6 102 6 HOH HOH . G 5 HOH X 7 103 7 HOH HOH . G 5 HOH X 8 104 8 HOH HOH . G 5 HOH X 9 105 9 HOH HOH . G 5 HOH X 10 106 10 HOH HOH . G 5 HOH X 11 107 11 HOH HOH . G 5 HOH X 12 108 12 HOH HOH . G 5 HOH X 13 109 13 HOH HOH . G 5 HOH X 14 110 14 HOH HOH . G 5 HOH X 15 111 15 HOH HOH . G 5 HOH X 16 112 16 HOH HOH . G 5 HOH X 17 113 17 HOH HOH . G 5 HOH X 18 114 18 HOH HOH . G 5 HOH X 19 115 19 HOH HOH . G 5 HOH X 20 116 20 HOH HOH . G 5 HOH X 21 117 21 HOH HOH . G 5 HOH X 22 118 22 HOH HOH . G 5 HOH X 23 119 23 HOH HOH . G 5 HOH X 24 120 24 HOH HOH . G 5 HOH X 25 121 25 HOH HOH . G 5 HOH X 26 122 26 HOH HOH . G 5 HOH X 27 123 27 HOH HOH . G 5 HOH X 28 124 28 HOH HOH . G 5 HOH X 29 125 29 HOH HOH . G 5 HOH X 30 126 30 HOH HOH . G 5 HOH X 31 127 31 HOH HOH . G 5 HOH X 32 128 32 HOH HOH . G 5 HOH X 33 129 33 HOH HOH . G 5 HOH X 34 130 34 HOH HOH . G 5 HOH X 35 131 35 HOH HOH . G 5 HOH X 36 132 36 HOH HOH . G 5 HOH X 37 133 37 HOH HOH . G 5 HOH X 38 134 38 HOH HOH . G 5 HOH X 39 135 39 HOH HOH . G 5 HOH X 40 136 40 HOH HOH . G 5 HOH X 41 137 41 HOH HOH . G 5 HOH X 42 138 42 HOH HOH . G 5 HOH X 43 139 43 HOH HOH . G 5 HOH X 44 140 44 HOH HOH . G 5 HOH X 45 141 45 HOH HOH . G 5 HOH X 46 142 46 HOH HOH . G 5 HOH X 47 143 47 HOH HOH . G 5 HOH X 48 144 48 HOH HOH . G 5 HOH X 49 145 49 HOH HOH . G 5 HOH X 50 146 50 HOH HOH . G 5 HOH X 51 147 51 HOH HOH . G 5 HOH X 52 148 52 HOH HOH . G 5 HOH X 53 149 53 HOH HOH . G 5 HOH X 54 150 54 HOH HOH . G 5 HOH X 55 151 55 HOH HOH . G 5 HOH X 56 152 56 HOH HOH . G 5 HOH X 57 153 57 HOH HOH . G 5 HOH X 58 154 58 HOH HOH . G 5 HOH X 59 155 59 HOH HOH . G 5 HOH X 60 156 60 HOH HOH . G 5 HOH X 61 157 61 HOH HOH . G 5 HOH X 62 158 62 HOH HOH . G 5 HOH X 63 159 63 HOH HOH . G 5 HOH X 64 160 64 HOH HOH . G 5 HOH X 65 161 65 HOH HOH . G 5 HOH X 66 162 66 HOH HOH . G 5 HOH X 67 163 67 HOH HOH . G 5 HOH X 68 164 68 HOH HOH . G 5 HOH X 69 165 69 HOH HOH . G 5 HOH X 70 166 70 HOH HOH . G 5 HOH X 71 167 71 HOH HOH . G 5 HOH X 72 168 72 HOH HOH . G 5 HOH X 73 169 73 HOH HOH . G 5 HOH X 74 170 74 HOH HOH . G 5 HOH X 75 171 75 HOH HOH . G 5 HOH X 76 172 76 HOH HOH . G 5 HOH X 77 173 77 HOH HOH . G 5 HOH X 78 174 78 HOH HOH . G 5 HOH X 79 175 79 HOH HOH . G 5 HOH X 80 176 80 HOH HOH . G 5 HOH X 81 177 81 HOH HOH . G 5 HOH X 82 178 82 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 21.36 _atom_site.Cartn_y -6.141 _atom_site.Cartn_z 3.385 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 93 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #