data_3CR9 # _model_server_result.job_id 68hKPXwBm2q5bXcaSqU3oQ _model_server_result.datetime_utc '2024-10-19 10:18:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cr9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":692}' # _entry.id 3CR9 # _exptl.entry_id 3CR9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CR9 _cell.length_a 85.946 _cell.length_b 99.497 _cell.length_c 102.415 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CR9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 45 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 19 A CYS 19 1_555 A SG CYS 36 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 A SG CYS 115 A CYS 115 1_555 A SG CYS 198 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf4 A SG CYS 157 A CYS 157 1_555 A SG CYS 173 A CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf5 A SG CYS 160 A CYS 160 1_555 A SG CYS 183 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 A SG CYS 170 A CYS 170 1_555 A SG CYS 181 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 A SG CYS 231 A CYS 231 1_555 A SG CYS 245 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf8 A SG CYS 348 A CYS 348 1_555 A SG CYS 380 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 A SG CYS 358 A CYS 358 1_555 A SG CYS 371 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf10 A SG CYS 405 A CYS 405 1_555 A SG CYS 684 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf11 A SG CYS 425 A CYS 425 1_555 A SG CYS 647 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf12 A SG CYS 457 A CYS 457 1_555 A SG CYS 532 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf13 A SG CYS 481 A CYS 481 1_555 A SG CYS 675 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf14 A SG CYS 491 A CYS 491 1_555 A SG CYS 505 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf15 A SG CYS 502 A CYS 502 1_555 A SG CYS 515 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf16 A SG CYS 573 A CYS 573 1_555 A SG CYS 587 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf17 A SG CYS 625 A CYS 625 1_555 A SG CYS 630 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A OD1 ASP 60 A ASP 60 1_555 C FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc2 A OH TYR 192 A TYR 192 1_555 C FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc3 A OD1 ASP 395 A ASP 395 1_555 D FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc4 A OH TYR 526 A TYR 526 1_555 D FE FE . A FE 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLC _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLC sing 83 n n C1 O1 GLC sing 84 n n C1 O5 GLC sing 85 n n C1 H1 GLC sing 86 n n C2 C3 GLC sing 87 n n C2 O2 GLC sing 88 n n C2 H2 GLC sing 89 n n C3 C4 GLC sing 90 n n C3 O3 GLC sing 91 n n C3 H3 GLC sing 92 n n C4 C5 GLC sing 93 n n C4 O4 GLC sing 94 n n C4 H4 GLC sing 95 n n C5 C6 GLC sing 96 n n C5 O5 GLC sing 97 n n C5 H5 GLC sing 98 n n C6 O6 GLC sing 99 n n C6 H61 GLC sing 100 n n C6 H62 GLC sing 101 n n O1 HO1 GLC sing 102 n n O2 HO2 GLC sing 103 n n O3 HO3 GLC sing 104 n n O4 HO4 GLC sing 105 n n O6 HO6 GLC sing 106 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLC a-D-glucopyranose 'COMMON NAME' GMML 1 GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 3CR9 _atom_sites.fract_transf_matrix[1][1] 0.011635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010051 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009764 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLC A 1 692 692 GLC GLC . C 3 FE A 1 690 690 FE FE . D 3 FE A 1 691 691 FE FE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLC . . . B 2 -17.383 13.81 -22.354 0.5 67.44 ? C1 GLC 692 A 1 HETATM 2 C C2 GLC . . . B 2 -16.925 15.181 -22.877 0.5 66.62 ? C2 GLC 692 A 1 HETATM 3 C C3 GLC . . . B 2 -18.108 16.137 -23.03 0.5 66.36 ? C3 GLC 692 A 1 HETATM 4 C C4 GLC . . . B 2 -19.263 15.486 -23.805 0.5 66.18 ? C4 GLC 692 A 1 HETATM 5 C C5 GLC . . . B 2 -19.594 14.09 -23.262 0.5 67.08 ? C5 GLC 692 A 1 HETATM 6 C C6 GLC . . . B 2 -20.58 13.373 -24.168 0.5 67.73 ? C6 GLC 692 A 1 HETATM 7 O O1 GLC . . . B 2 -17.899 13.924 -21.071 0.5 68.01 ? O1 GLC 692 A 1 HETATM 8 O O2 GLC . . . B 2 -15.98 15.749 -21.983 0.5 65.84 ? O2 GLC 692 A 1 HETATM 9 O O3 GLC . . . B 2 -17.671 17.299 -23.72 0.5 66.95 ? O3 GLC 692 A 1 HETATM 10 O O4 GLC . . . B 2 -20.42 16.304 -23.708 0.5 65.37 ? O4 GLC 692 A 1 HETATM 11 O O5 GLC . . . B 2 -18.403 13.269 -23.209 0.5 68.28 ? O5 GLC 692 A 1 HETATM 12 O O6 GLC . . . B 2 -21.804 13.099 -23.5 0.5 67.56 ? O6 GLC 692 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #